RNA–Protein interactions for RNA: ENST00000380097.7

TRIM6-202, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 3,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-202ENST00000380097 GUCY1A2P33402 732 aa8.03□□□□□ -1.12
TRIM6-202ENST00000380097 PRPHP41219 470 aa8.03□□□□□ -1.12
TRIM6-202ENST00000380097 PDCD2Q16342 344 aaPredicted RBP8.03□□□□□ -1.12
TRIM6-202ENST00000380097 DDB1Q16531 1140 aa8.03□□□□□ -1.12
TRIM6-202ENST00000380097 LACTB2Q53H82 288 aaPredicted RBP8.03□□□□□ -1.12
TRIM6-202ENST00000380097 CCDC178Q5BJE1 867 aa8.03□□□□□ -1.12
TRIM6-202ENST00000380097 BICDL1Q6ZP65 573 aa8.03□□□□□ -1.12
TRIM6-202ENST00000380097 RETREG2Q8NC44 543 aa8.03□□□□□ -1.12
TRIM6-202ENST00000380097 TATDN2Q93075 761 aa8.03□□□□□ -1.12
TRIM6-202ENST00000380097 PYM1Q9BRP8 204 aaKnown RBP8.03□□□□□ -1.12
TRIM6-202ENST00000380097 TUBGCP2Q9BSJ2 902 aa8.03□□□□□ -1.12
TRIM6-202ENST00000380097 PUS7LQ9H0K6 701 aaKnown RBP8.03□□□□□ -1.12
TRIM6-202ENST00000380097 SENP2Q9HC62 589 aa8.03□□□□□ -1.12
TRIM6-202ENST00000380097 RNF14Q9UBS8 474 aa8.03□□□□□ -1.12
TRIM6-202ENST00000380097 TSKSQ9UJT2 592 aa8.03□□□□□ -1.12
TRIM6-202ENST00000380097 DENND2AQ9ULE3 1009 aa8.03□□□□□ -1.12
TRIM6-202ENST00000380097 GTPBP6O43824 516 aaPredicted RBP8.03□□□□□ -1.12
TRIM6-202ENST00000380097 SNRPA1P09661 255 aaKnown RBP8.03□□□□□ -1.12
TRIM6-202ENST00000380097 PRCPP42785 496 aa8.03□□□□□ -1.12
TRIM6-202ENST00000380097 TDRD12Q587J7 1177 aaKnown RBP8.03□□□□□ -1.12
TRIM6-202ENST00000380097 TRIM68Q6AZZ1 485 aa8.03□□□□□ -1.12
TRIM6-202ENST00000380097 CSGALNACT2Q8N6G5 542 aa8.03□□□□□ -1.12
TRIM6-202ENST00000380097 CCDC155Q8N6L0 562 aa8.03□□□□□ -1.12
TRIM6-202ENST00000380097 CHMP6Q96FZ7 201 aa8.03□□□□□ -1.12
TRIM6-202ENST00000380097 SELENOSQ9BQE4 189 aa8.03□□□□□ -1.12
TRIM6-202ENST00000380097 SH2D4AQ9H788 454 aa8.03□□□□□ -1.12
TRIM6-202ENST00000380097 LUC7LQ9NQ29 371 aaKnown RBP8.03□□□□□ -1.12
TRIM6-202ENST00000380097 CFAP73A6NFT4 308 aa8.02□□□□□ -1.13
TRIM6-202ENST00000380097 KCNQ2O43526 872 aa8.02□□□□□ -1.13
TRIM6-202ENST00000380097 RPN1P04843 607 aaKnown RBP8.02□□□□□ -1.13
TRIM6-202ENST00000380097 VIMP08670 466 aaKnown RBP8.02□□□□□ -1.13
TRIM6-202ENST00000380097 IFNAR1P17181 557 aa8.02□□□□□ -1.13
TRIM6-202ENST00000380097 MAGOHP61326 146 aaKnown RBP8.02□□□□□ -1.13
TRIM6-202ENST00000380097 EMC10Q5UCC4 262 aa8.02□□□□□ -1.13
TRIM6-202ENST00000380097 MIS18BP1Q6P0N0 1132 aa8.02□□□□□ -1.13
TRIM6-202ENST00000380097 DNAJC10Q8IXB1 793 aa8.02□□□□□ -1.13
TRIM6-202ENST00000380097 SYNE4Q8N205 404 aa8.02□□□□□ -1.13
TRIM6-202ENST00000380097 OXER1Q8TDS5 423 aa8.02□□□□□ -1.13
TRIM6-202ENST00000380097 MAGOHBQ96A72 148 aaKnown RBP8.02□□□□□ -1.13
TRIM6-202ENST00000380097 FAM89AQ96GI7 184 aa8.02□□□□□ -1.13
TRIM6-202ENST00000380097 DCAF5Q96JK2 942 aa8.02□□□□□ -1.13
TRIM6-202ENST00000380097 NOC4LQ9BVI4 516 aaKnown RBP8.02□□□□□ -1.13
TRIM6-202ENST00000380097 TMX4Q9H1E5 349 aaPredicted RBP8.02□□□□□ -1.13
TRIM6-202ENST00000380097 EBF2Q9HAK2 575 aa8.02□□□□□ -1.13
TRIM6-202ENST00000380097 STK38LQ9Y2H1 464 aa8.02□□□□□ -1.13
TRIM6-202ENST00000380097 PXDNQ92626 1479 aa8.02□□□□□ -1.13
TRIM6-202ENST00000380097 CACNA1FO60840 1977 aa8.02□□□□□ -1.13
TRIM6-202ENST00000380097 FMN2Q9NZ56 1722 aa8.02□□□□□ -1.13
TRIM6-202ENST00000380097 RPS6KA3P51812 740 aa8.02□□□□□ -1.13
TRIM6-202ENST00000380097 KIF11P52732 1056 aa8.02□□□□□ -1.13
TRIM6-202ENST00000380097 INHBEP58166 350 aa8.02□□□□□ -1.13
TRIM6-202ENST00000380097 LACTBP83111 547 aaPredicted RBP8.02□□□□□ -1.13
TRIM6-202ENST00000380097 MXRA7P84157 204 aa8.02□□□□□ -1.13
TRIM6-202ENST00000380097 ATP11AP98196 1134 aa8.02□□□□□ -1.13
TRIM6-202ENST00000380097 NTRK3Q16288 839 aa8.02□□□□□ -1.13
TRIM6-202ENST00000380097 MEA1Q16626 185 aa8.02□□□□□ -1.13
TRIM6-202ENST00000380097 GIGYF2Q6Y7W6 1299 aaKnown RBP8.02□□□□□ -1.13
TRIM6-202ENST00000380097 CACNA2D4Q7Z3S7 1137 aa8.02□□□□□ -1.13
TRIM6-202ENST00000380097 MREGQ8N565 214 aa8.02□□□□□ -1.13
TRIM6-202ENST00000380097 CASKIN2Q8WXE0 1202 aa8.02□□□□□ -1.13
TRIM6-202ENST00000380097 CCT6BQ92526 530 aa8.02□□□□□ -1.13
TRIM6-202ENST00000380097 MMRN2Q9H8L6 949 aa8.02□□□□□ -1.13
TRIM6-202ENST00000380097 GDF3Q9NR23 364 aa8.02□□□□□ -1.13
TRIM6-202ENST00000380097 CORO1CQ9ULV4 474 aaPredicted RBP8.02□□□□□ -1.13
TRIM6-202ENST00000380097 MYH15Q9Y2K3 1946 aa8.02□□□□□ -1.13
TRIM6-202ENST00000380097 LRRD1A4D1F6 860 aa8.01□□□□□ -1.13
TRIM6-202ENST00000380097 IDH1O75874 414 aaKnown RBP8.01□□□□□ -1.13
TRIM6-202ENST00000380097 STAT6P42226 847 aa8.01□□□□□ -1.13
TRIM6-202ENST00000380097 RASSF7Q02833 373 aa8.01□□□□□ -1.13
TRIM6-202ENST00000380097 TAF11Q15544 211 aa8.01□□□□□ -1.13
TRIM6-202ENST00000380097 ZC3H12AQ5D1E8 599 aaKnown RBP8.01□□□□□ -1.13
TRIM6-202ENST00000380097 LRIG3Q6UXM1 1119 aa8.01□□□□□ -1.13
TRIM6-202ENST00000380097 SH3RF1Q7Z6J0 888 aa8.01□□□□□ -1.13
TRIM6-202ENST00000380097 FAM114A1Q8IWE2 563 aa8.01□□□□□ -1.13
TRIM6-202ENST00000380097 CCDC24Q8N4L8 307 aa8.01□□□□□ -1.13
TRIM6-202ENST00000380097 AGAP11Q8TF27 550 aa8.01□□□□□ -1.13
TRIM6-202ENST00000380097 FAM210AQ96ND0 272 aa8.01□□□□□ -1.13
TRIM6-202ENST00000380097 IQSEC3Q9UPP2 1182 aaPredicted RBP8.01□□□□□ -1.13
TRIM6-202ENST00000380097 STK36Q9NRP7 1315 aa8.01□□□□□ -1.13
TRIM6-202ENST00000380097 PCK1P35558 622 aa8.01□□□□□ -1.13
TRIM6-202ENST00000380097 KRT2P35908 639 aa8.01□□□□□ -1.13
TRIM6-202ENST00000380097 HSD17B3P37058 310 aa8.01□□□□□ -1.13
TRIM6-202ENST00000380097 EIF4A3P38919 411 aaKnown RBP8.01□□□□□ -1.13
TRIM6-202ENST00000380097 PAPOLAP51003 745 aaKnown RBP8.01□□□□□ -1.13
TRIM6-202ENST00000380097 MTMR3Q13615 1198 aa8.01□□□□□ -1.13
TRIM6-202ENST00000380097 CDCA2Q69YH5 1023 aaPredicted RBP8.01□□□□□ -1.13
TRIM6-202ENST00000380097 TBC1D10CQ8IV04 446 aa8.01□□□□□ -1.13
TRIM6-202ENST00000380097 C1orf131Q8NDD1 294 aaKnown RBP8.01□□□□□ -1.13
TRIM6-202ENST00000380097 HELBQ8NG08 1087 aaPredicted RBP8.01□□□□□ -1.13
TRIM6-202ENST00000380097 ZKSCAN3Q9BRR0 538 aa8.01□□□□□ -1.13
TRIM6-202ENST00000380097 NSRP1Q9H0G5 558 aaKnown RBP8.01□□□□□ -1.13
TRIM6-202ENST00000380097 PLCB1Q9NQ66 1216 aa8.01□□□□□ -1.13
TRIM6-202ENST00000380097 PAPOLBQ9NRJ5 636 aaKnown RBP8.01□□□□□ -1.13
TRIM6-202ENST00000380097 G3BP2Q9UN86 482 aaKnown RBP8.01□□□□□ -1.13
TRIM6-202ENST00000380097 MON2Q7Z3U7 1717 aa8.01□□□□□ -1.13
TRIM6-202ENST00000380097 ANKRD33BA6NCL7 494 aa8.01□□□□□ -1.13
TRIM6-202ENST00000380097 EVI5O60447 810 aa8.01□□□□□ -1.13
TRIM6-202ENST00000380097 SMNDC1O75940 238 aaKnown RBP eCLIP8.01□□□□□ -1.13
TRIM6-202ENST00000380097 PLEKP08567 350 aaPredicted RBP8.01□□□□□ -1.13
TRIM6-202ENST00000380097 SRGNP10124 158 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms