RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 TBC1D8O95759 1140 aa16.08■□□□□ 0.16
HERPUD1-203ENST00000379792 PGK2P07205 417 aa16.08■□□□□ 0.16
HERPUD1-203ENST00000379792 MCM7P33993 719 aa16.08■□□□□ 0.16
HERPUD1-203ENST00000379792 SF3A1Q15459 793 aaKnown RBP16.08■□□□□ 0.16
HERPUD1-203ENST00000379792 TPRNQ4KMQ1 711 aa16.08■□□□□ 0.16
HERPUD1-203ENST00000379792 ANO1Q5XXA6 986 aa16.08■□□□□ 0.16
HERPUD1-203ENST00000379792 SHCBP1Q8NEM2 672 aa16.08■□□□□ 0.16
HERPUD1-203ENST00000379792 MMP19Q99542 508 aa16.08■□□□□ 0.16
HERPUD1-203ENST00000379792 DDX49Q9Y6V7 483 aaKnown RBP16.08■□□□□ 0.16
HERPUD1-203ENST00000379792 COPB2P35606 906 aa16.07■□□□□ 0.16
HERPUD1-203ENST00000379792 ARHGAP4P98171 946 aa16.07■□□□□ 0.16
HERPUD1-203ENST00000379792 MCTP2Q6DN12 878 aa16.07■□□□□ 0.16
HERPUD1-203ENST00000379792 CLEC17AQ6ZS10 378 aa16.07■□□□□ 0.16
HERPUD1-203ENST00000379792 NEK8Q86SG6 692 aa16.07■□□□□ 0.16
HERPUD1-203ENST00000379792 GBP4Q96PP9 640 aa16.07■□□□□ 0.16
HERPUD1-203ENST00000379792 RMDN3Q96TC7 470 aa16.07■□□□□ 0.16
HERPUD1-203ENST00000379792 MRVI1Q9Y6F6 885 aa16.07■□□□□ 0.16
HERPUD1-203ENST00000379792 CCNT1O60563 726 aaKnown RBP16.06■□□□□ 0.16
HERPUD1-203ENST00000379792 TDP2O95551 362 aa16.06■□□□□ 0.16
HERPUD1-203ENST00000379792 FCER1AP12319 257 aa16.06■□□□□ 0.16
HERPUD1-203ENST00000379792 EIF2AK2P19525 551 aaKnown RBP16.06■□□□□ 0.16
HERPUD1-203ENST00000379792 SREBF1P36956 1147 aa16.06■□□□□ 0.16
HERPUD1-203ENST00000379792 KCTD2Q14681 263 aa16.06■□□□□ 0.16
HERPUD1-203ENST00000379792 IL31RAQ8NI17 732 aa16.06■□□□□ 0.16
HERPUD1-203ENST00000379792 MAP3K20Q9NYL2 800 aaKnown RBP16.06■□□□□ 0.16
HERPUD1-203ENST00000379792 RTEL1Q9NZ71 1219 aa16.06■□□□□ 0.16
HERPUD1-203ENST00000379792 CFAP45Q9UL16 551 aa16.06■□□□□ 0.16
HERPUD1-203ENST00000379792 POTEB2H3BUK9 544 aa16.05■□□□□ 0.16
HERPUD1-203ENST00000379792 TRAPPC10P48553 1259 aa16.05■□□□□ 0.16
HERPUD1-203ENST00000379792 ATL3Q6DD88 541 aa16.05■□□□□ 0.16
HERPUD1-203ENST00000379792 TEX2Q8IWB9 1127 aa16.05■□□□□ 0.16
HERPUD1-203ENST00000379792 SAMD3Q8N6K7 520 aa16.05■□□□□ 0.16
HERPUD1-203ENST00000379792 LEO1Q8WVC0 666 aaPredicted RBP16.05■□□□□ 0.16
HERPUD1-203ENST00000379792 CRYGNQ8WXF5 182 aa16.05■□□□□ 0.16
HERPUD1-203ENST00000379792 SPATA32Q96LK8 384 aa16.05■□□□□ 0.16
HERPUD1-203ENST00000379792 UIMC1Q96RL1 719 aa16.05■□□□□ 0.16
HERPUD1-203ENST00000379792 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.05■□□□□ 0.16
HERPUD1-203ENST00000379792 PFASO15067 1338 aa16.05■□□□□ 0.16
HERPUD1-203ENST00000379792 STK38Q15208 465 aa16.05■□□□□ 0.16
HERPUD1-203ENST00000379792 PTPAQ15257 358 aa16.05■□□□□ 0.16
HERPUD1-203ENST00000379792 ARHGEF16Q5VV41 709 aa16.05■□□□□ 0.16
HERPUD1-203ENST00000379792 GPR142Q7Z601 462 aa16.05■□□□□ 0.16
HERPUD1-203ENST00000379792 PXMP2Q9NR77 195 aa16.05■□□□□ 0.16
HERPUD1-203ENST00000379792 POLR3EQ9NVU0 708 aa16.05■□□□□ 0.16
HERPUD1-203ENST00000379792 RPTORQ8N122 1335 aa16.04■□□□□ 0.16
HERPUD1-203ENST00000379792 CASP8AP2Q9UKL3 1982 aa16.04■□□□□ 0.16
HERPUD1-203ENST00000379792 SOWAHBA6NEL2 793 aa16.04■□□□□ 0.16
HERPUD1-203ENST00000379792 MYCLP12524 364 aaPredicted RBP16.04■□□□□ 0.16
HERPUD1-203ENST00000379792 MARCKSP29966 332 aaPredicted RBP16.04■□□□□ 0.16
HERPUD1-203ENST00000379792 MAPK4P31152 587 aa16.04■□□□□ 0.16
HERPUD1-203ENST00000379792 NASPP49321 788 aaPredicted RBP16.04■□□□□ 0.16
HERPUD1-203ENST00000379792 PLEKHH3Q7Z736 793 aa16.04■□□□□ 0.16
HERPUD1-203ENST00000379792 LINC00301Q8NCQ3 95 aa16.04■□□□□ 0.16
HERPUD1-203ENST00000379792 CYP2W1Q8TAV3 490 aa16.04■□□□□ 0.16
HERPUD1-203ENST00000379792 EHMT1Q9H9B1 1298 aa16.04■□□□□ 0.16
HERPUD1-203ENST00000379792 RCOR1Q9UKL0 485 aa16.04■□□□□ 0.16
HERPUD1-203ENST00000379792 IVNS1ABPQ9Y6Y0 642 aa16.04■□□□□ 0.16
HERPUD1-203ENST00000379792 ASTN1O14525 1302 aa16.04■□□□□ 0.16
HERPUD1-203ENST00000379792 SLC37A4O43826 429 aa16.03■□□□□ 0.16
HERPUD1-203ENST00000379792 PRPF40AO75400 957 aaKnown RBP16.03■□□□□ 0.16
HERPUD1-203ENST00000379792 ADORA2AP29274 412 aa16.03■□□□□ 0.16
HERPUD1-203ENST00000379792 ZNF76P36508 570 aa16.03■□□□□ 0.16
HERPUD1-203ENST00000379792 USP11P51784 963 aa16.03■□□□□ 0.16
HERPUD1-203ENST00000379792 PTGDRQ13258 359 aa16.03■□□□□ 0.16
HERPUD1-203ENST00000379792 SLC39A14Q15043 492 aa16.03■□□□□ 0.16
HERPUD1-203ENST00000379792 FAM133AQ8N9E0 248 aa16.03■□□□□ 0.16
HERPUD1-203ENST00000379792 PDCD2LQ9BRP1 358 aa16.03■□□□□ 0.16
HERPUD1-203ENST00000379792 SCAND2PQ9GZW5 306 aaPredicted RBP16.03■□□□□ 0.16
HERPUD1-203ENST00000379792 TMEM60Q9H2L4 133 aa16.03■□□□□ 0.16
HERPUD1-203ENST00000379792 DNAJC25-GNG10A0A024R161 153 aa16.03■□□□□ 0.16
HERPUD1-203ENST00000379792 FAM86B1E9PN63 330 aa16.03■□□□□ 0.16
HERPUD1-203ENST00000379792 COBLO75128 1261 aa16.03■□□□□ 0.16
HERPUD1-203ENST00000379792 FAM86B2P0C5J1 330 aa16.03■□□□□ 0.16
HERPUD1-203ENST00000379792 PTPREP23469 700 aa16.03■□□□□ 0.16
HERPUD1-203ENST00000379792 MCM4P33991 863 aa16.03■□□□□ 0.16
HERPUD1-203ENST00000379792 PGM5Q15124 567 aa16.03■□□□□ 0.16
HERPUD1-203ENST00000379792 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.03■□□□□ 0.16
HERPUD1-203ENST00000379792 POTEDQ86YR6 584 aa16.03■□□□□ 0.16
HERPUD1-203ENST00000379792 NSUN6Q8TEA1 469 aaKnown RBP16.03■□□□□ 0.16
HERPUD1-203ENST00000379792 DDX25Q9UHL0 483 aaKnown RBP16.03■□□□□ 0.16
HERPUD1-203ENST00000379792 TCHHQ07283 1943 aa16.02■□□□□ 0.16
HERPUD1-203ENST00000379792 GPR25O00155 361 aa16.02■□□□□ 0.15
HERPUD1-203ENST00000379792 SPTLC2O15270 562 aa16.02■□□□□ 0.15
HERPUD1-203ENST00000379792 STRNO43815 780 aa16.02■□□□□ 0.15
HERPUD1-203ENST00000379792 YEATS4O95619 227 aa16.02■□□□□ 0.15
HERPUD1-203ENST00000379792 NR3C2P08235 984 aa16.02■□□□□ 0.15
HERPUD1-203ENST00000379792 CYP3A4P08684 503 aa16.02■□□□□ 0.15
HERPUD1-203ENST00000379792 CTGFP29279 349 aa16.02■□□□□ 0.15
HERPUD1-203ENST00000379792 PRR16Q569H4 304 aa16.02■□□□□ 0.15
HERPUD1-203ENST00000379792 C4orf32Q8N8J7 132 aa16.02■□□□□ 0.15
HERPUD1-203ENST00000379792 GJA10Q969M2 543 aa16.02■□□□□ 0.15
HERPUD1-203ENST00000379792 FGD4Q96M96 766 aa16.02■□□□□ 0.15
HERPUD1-203ENST00000379792 ARHGAP39Q9C0H5 1083 aa16.02■□□□□ 0.15
HERPUD1-203ENST00000379792 MAF1Q9H063 256 aa16.02■□□□□ 0.15
HERPUD1-203ENST00000379792 RBBP6Q7Z6E9 1792 aaKnown RBP16.02■□□□□ 0.15
HERPUD1-203ENST00000379792 FRMPD4Q14CM0 1322 aa16.02■□□□□ 0.15
HERPUD1-203ENST00000379792 MYH7BA7E2Y1 1941 aa16.01■□□□□ 0.15
HERPUD1-203ENST00000379792 NEMFO60524 1076 aa16.01■□□□□ 0.15
HERPUD1-203ENST00000379792 GADD45BO75293 160 aaPredicted RBP16.01■□□□□ 0.15
HERPUD1-203ENST00000379792 ME1P48163 572 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms