RNA–Protein interactions for RNA: ENST00000379608.7

TFAP2A-202, Transcript of transcription factor AP-2 alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TFAP2A, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-202ENST00000379608 VAV2P52735 878 aa23.27■■□□□ 1.32
TFAP2A-202ENST00000379608 KIF5AQ12840 1032 aa23.27■■□□□ 1.32
TFAP2A-202ENST00000379608 CREG2Q8IUH2 290 aa23.27■■□□□ 1.32
TFAP2A-202ENST00000379608 PURBQ96QR8 312 aaKnown RBP23.27■■□□□ 1.32
TFAP2A-202ENST00000379608 SNED1Q8TER0 1413 aa23.26■■□□□ 1.31
TFAP2A-202ENST00000379608 PRPHP41219 470 aa23.26■■□□□ 1.31
TFAP2A-202ENST00000379608 EHD4Q9H223 541 aa23.26■■□□□ 1.31
TFAP2A-202ENST00000379608 LRRC53A6NM62 1247 aa23.26■■□□□ 1.31
TFAP2A-202ENST00000379608 SLURP2P0DP57 97 aa23.26■■□□□ 1.31
TFAP2A-202ENST00000379608 RRAGAQ7L523 313 aa23.26■■□□□ 1.31
TFAP2A-202ENST00000379608 SRLQ86TD4 932 aa23.26■■□□□ 1.31
TFAP2A-202ENST00000379608 IFIH1Q9BYX4 1025 aaKnown RBP23.26■■□□□ 1.31
TFAP2A-202ENST00000379608 RSPH14Q9UHP6 348 aa23.26■■□□□ 1.31
TFAP2A-202ENST00000379608 SIK3Q9Y2K2 1263 aa23.26■■□□□ 1.31
TFAP2A-202ENST00000379608 PCDHA13Q9Y5I0 950 aa23.26■■□□□ 1.31
TFAP2A-202ENST00000379608 BTDP43251 543 aa23.25■■□□□ 1.31
TFAP2A-202ENST00000379608 KIF11P52732 1056 aa23.25■■□□□ 1.31
TFAP2A-202ENST00000379608 ZSCAN29Q8IWY8 852 aaPredicted RBP23.25■■□□□ 1.31
TFAP2A-202ENST00000379608 BICDL2A1A5D9 508 aa23.25■■□□□ 1.31
TFAP2A-202ENST00000379608 BUB1O43683 1085 aa23.25■■□□□ 1.31
TFAP2A-202ENST00000379608 ECM1Q16610 540 aa23.25■■□□□ 1.31
TFAP2A-202ENST00000379608 CCNI2Q6ZMN8 369 aaPredicted RBP23.25■■□□□ 1.31
TFAP2A-202ENST00000379608 ERGIC2Q96RQ1 377 aa23.25■■□□□ 1.31
TFAP2A-202ENST00000379608 FGFBP2Q9BYJ0 223 aa23.25■■□□□ 1.31
TFAP2A-202ENST00000379608 NDST4Q9H3R1 872 aa23.25■■□□□ 1.31
TFAP2A-202ENST00000379608 GFPT1Q06210 699 aaPredicted RBP23.24■■□□□ 1.31
TFAP2A-202ENST00000379608 VWA3BQ502W6 1294 aa23.24■■□□□ 1.31
TFAP2A-202ENST00000379608 RTFDC1Q9BY42 306 aaPredicted RBP23.24■■□□□ 1.31
TFAP2A-202ENST00000379608 POLD4Q9HCU8 107 aa23.24■■□□□ 1.31
TFAP2A-202ENST00000379608 TBC1D7Q9P0N9 293 aa23.24■■□□□ 1.31
TFAP2A-202ENST00000379608 COL5A3P25940 1745 aaPredicted RBP23.24■■□□□ 1.31
TFAP2A-202ENST00000379608 SPA17Q15506 151 aa23.24■■□□□ 1.31
TFAP2A-202ENST00000379608 KRT25Q7Z3Z0 450 aa23.24■■□□□ 1.31
TFAP2A-202ENST00000379608 CCDC170Q8IYT3 715 aa23.24■■□□□ 1.31
TFAP2A-202ENST00000379608 LRRC47Q8N1G4 583 aaKnown RBP23.24■■□□□ 1.31
TFAP2A-202ENST00000379608 NOC3LQ8WTT2 800 aaKnown RBP23.24■■□□□ 1.31
TFAP2A-202ENST00000379608 NUP58Q9BVL2 599 aa23.24■■□□□ 1.31
TFAP2A-202ENST00000379608 NLRC4Q9NPP4 1024 aa23.24■■□□□ 1.31
TFAP2A-202ENST00000379608 SNX12Q9UMY4 172 aa23.24■■□□□ 1.31
TFAP2A-202ENST00000379608 NRAPQ86VF7 1730 aa23.24■■□□□ 1.31
TFAP2A-202ENST00000379608 MYL1P05976 194 aa23.23■■□□□ 1.31
TFAP2A-202ENST00000379608 TUBB4BP68371 445 aa23.23■■□□□ 1.31
TFAP2A-202ENST00000379608 SPTY2D1Q68D10 685 aaPredicted RBP23.23■■□□□ 1.31
TFAP2A-202ENST00000379608 SMARCC1Q92922 1105 aaPredicted RBP23.23■■□□□ 1.31
TFAP2A-202ENST00000379608 MS4A14Q96JA4 679 aa23.23■■□□□ 1.31
TFAP2A-202ENST00000379608 SH2D4AQ9H788 454 aa23.23■■□□□ 1.31
TFAP2A-202ENST00000379608 PODXL2Q9NZ53 605 aa23.23■■□□□ 1.31
TFAP2A-202ENST00000379608 NARFQ9UHQ1 456 aa23.23■■□□□ 1.31
TFAP2A-202ENST00000379608 SPATA31A5Q5VU36 1347 aa23.23■■□□□ 1.31
TFAP2A-202ENST00000379608 SPATA31A7Q8IWB4 1347 aa23.23■■□□□ 1.31
TFAP2A-202ENST00000379608 LAD1O00515 517 aa23.23■■□□□ 1.31
TFAP2A-202ENST00000379608 UBE2SQ16763 222 aa23.23■■□□□ 1.31
TFAP2A-202ENST00000379608 TTC19Q6DKK2 380 aaPredicted RBP23.23■■□□□ 1.31
TFAP2A-202ENST00000379608 CENPPQ6IPU0 288 aa23.23■■□□□ 1.31
TFAP2A-202ENST00000379608 MSL3Q8N5Y2 521 aaKnown RBP23.23■■□□□ 1.31
TFAP2A-202ENST00000379608 CDCA7Q9BWT1 371 aaPredicted RBP23.23■■□□□ 1.31
TFAP2A-202ENST00000379608 DEF6Q9H4E7 631 aa23.23■■□□□ 1.31
TFAP2A-202ENST00000379608 C6orf50Q9HD87 102 aa23.23■■□□□ 1.31
TFAP2A-202ENST00000379608 ROBO3Q96MS0 1386 aa23.22■■□□□ 1.31
TFAP2A-202ENST00000379608 CACNB1Q02641 598 aaPredicted RBP23.22■■□□□ 1.31
TFAP2A-202ENST00000379608 ENOX2Q16206 610 aaKnown RBP23.22■■□□□ 1.31
TFAP2A-202ENST00000379608 SND1Q7KZF4 910 aaKnown RBP eCLIP23.22■■□□□ 1.31
TFAP2A-202ENST00000379608 REXO1Q8N1G1 1221 aaKnown RBP23.22■■□□□ 1.31
TFAP2A-202ENST00000379608 AFAP1L1Q8TED9 768 aa23.22■■□□□ 1.31
TFAP2A-202ENST00000379608 PLAGL2Q9UPG8 496 aa23.22■■□□□ 1.31
TFAP2A-202ENST00000379608 CKAP4Q07065 602 aaKnown RBP23.22■■□□□ 1.31
TFAP2A-202ENST00000379608 SOGA3Q5TF21 947 aa23.22■■□□□ 1.31
TFAP2A-202ENST00000379608 TPTE2Q6XPS3 522 aa23.22■■□□□ 1.31
TFAP2A-202ENST00000379608 SV2BQ7L1I2 683 aa23.22■■□□□ 1.31
TFAP2A-202ENST00000379608 CALML4Q96GE6 196 aa23.22■■□□□ 1.31
TFAP2A-202ENST00000379608 AK8Q96MA6 479 aa23.22■■□□□ 1.31
TFAP2A-202ENST00000379608 SPZ1Q9BXG8 430 aa23.22■■□□□ 1.31
TFAP2A-202ENST00000379608 MED4Q9NPJ6 270 aa23.22■■□□□ 1.31
TFAP2A-202ENST00000379608 AKR1B10O60218 316 aa23.21■■□□□ 1.31
TFAP2A-202ENST00000379608 AARSP49588 968 aaKnown RBP eCLIP23.21■■□□□ 1.31
TFAP2A-202ENST00000379608 RASSF7Q02833 373 aa23.21■■□□□ 1.31
TFAP2A-202ENST00000379608 CALCRLQ16602 461 aa23.21■■□□□ 1.31
TFAP2A-202ENST00000379608 GALNT17Q6IS24 598 aa23.21■■□□□ 1.31
TFAP2A-202ENST00000379608 CNNM4Q6P4Q7 775 aa23.21■■□□□ 1.31
TFAP2A-202ENST00000379608 TEX11Q8IYF3 940 aa23.21■■□□□ 1.31
TFAP2A-202ENST00000379608 EHBP1Q8NDI1 1231 aa23.21■■□□□ 1.31
TFAP2A-202ENST00000379608 CCDC47Q96A33 483 aaKnown RBP23.21■■□□□ 1.31
TFAP2A-202ENST00000379608 MTMR8Q96EF0 704 aa23.21■■□□□ 1.31
TFAP2A-202ENST00000379608 TANGO6Q9C0B7 1094 aa23.21■■□□□ 1.31
TFAP2A-202ENST00000379608 KDM4FA0A1W2PPD8 638 aa23.21■■□□□ 1.31
TFAP2A-202ENST00000379608 BAG3O95817 575 aa23.21■■□□□ 1.31
TFAP2A-202ENST00000379608 SLC1A4P43007 532 aa23.21■■□□□ 1.31
TFAP2A-202ENST00000379608 FAM114A1Q8IWE2 563 aa23.21■■□□□ 1.31
TFAP2A-202ENST00000379608 AMOTL1Q8IY63 956 aa23.21■■□□□ 1.31
TFAP2A-202ENST00000379608 RETREG2Q8NC44 543 aa23.21■■□□□ 1.31
TFAP2A-202ENST00000379608 CRACR2AQ9BSW2 395 aa23.21■■□□□ 1.31
TFAP2A-202ENST00000379608 GPCPD1Q9NPB8 672 aa23.21■■□□□ 1.31
TFAP2A-202ENST00000379608 SEC63Q9UGP8 760 aaKnown RBP23.21■■□□□ 1.31
TFAP2A-202ENST00000379608 ZNF662Q6ZS27 426 aa23.2■■□□□ 1.3
TFAP2A-202ENST00000379608 DNAAF5Q86Y56 855 aa23.2■■□□□ 1.3
TFAP2A-202ENST00000379608 WDR66Q8TBY9 1149 aa23.2■■□□□ 1.3
TFAP2A-202ENST00000379608 LARP4BQ92615 738 aaKnown RBP23.2■■□□□ 1.3
TFAP2A-202ENST00000379608 ARHGEF1Q92888 912 aaKnown RBP23.2■■□□□ 1.3
TFAP2A-202ENST00000379608 MTMR9Q96QG7 549 aa23.2■■□□□ 1.3
TFAP2A-202ENST00000379608 NYXQ9GZU5 481 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms