RNA–Protein interactions for RNA: ENST00000379316.3

PDCD5-202, Transcript of programmed cell death 5, humanhuman

TSL 1 (best) BASIC

Gene PDCD5, Length 154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-202ENST00000379316 CALM2P0DP24 149 aa16.08■□□□□ 0.16
PDCD5-202ENST00000379316 CALM3P0DP25 149 aa16.08■□□□□ 0.16
PDCD5-202ENST00000379316 GNAQP50148 359 aa16.08■□□□□ 0.16
PDCD5-202ENST00000379316 PPIGQ13427 754 aaKnown RBP eCLIP16.08■□□□□ 0.16
PDCD5-202ENST00000379316 SHHQ15465 462 aa16.08■□□□□ 0.16
PDCD5-202ENST00000379316 MFSD5Q6N075 450 aa16.08■□□□□ 0.16
PDCD5-202ENST00000379316 NFXL1Q6ZNB6 911 aa16.08■□□□□ 0.16
PDCD5-202ENST00000379316 STOX1Q6ZVD7 989 aa16.08■□□□□ 0.16
PDCD5-202ENST00000379316 HOMER1Q86YM7 354 aa16.08■□□□□ 0.16
PDCD5-202ENST00000379316 TMEM199Q8N511 208 aa16.08■□□□□ 0.16
PDCD5-202ENST00000379316 DEFB123Q8N688 67 aa16.08■□□□□ 0.16
PDCD5-202ENST00000379316 SLC43A3Q8NBI5 491 aa16.08■□□□□ 0.16
PDCD5-202ENST00000379316 IGDCC4Q8TDY8 1250 aa16.08■□□□□ 0.16
PDCD5-202ENST00000379316 LZTS2Q9BRK4 669 aa16.08■□□□□ 0.16
PDCD5-202ENST00000379316 PNMA6FA0A0J9YX94 578 aa16.07■□□□□ 0.16
PDCD5-202ENST00000379316 CCDC69A6NI79 296 aa16.07■□□□□ 0.16
PDCD5-202ENST00000379316 PRC1O43663 620 aa16.07■□□□□ 0.16
PDCD5-202ENST00000379316 EIF3JO75822 258 aaKnown RBP16.07■□□□□ 0.16
PDCD5-202ENST00000379316 SUPT20HL2P0C7V6 817 aa16.07■□□□□ 0.16
PDCD5-202ENST00000379316 HSD17B4P51659 736 aa16.07■□□□□ 0.16
PDCD5-202ENST00000379316 GHRHRQ02643 423 aa16.07■□□□□ 0.16
PDCD5-202ENST00000379316 CHST3Q7LGC8 479 aa16.07■□□□□ 0.16
PDCD5-202ENST00000379316 CCDC136Q96JN2 1154 aa16.07■□□□□ 0.16
PDCD5-202ENST00000379316 TAAR1Q96RJ0 339 aa16.07■□□□□ 0.16
PDCD5-202ENST00000379316 MTG1Q9BT17 334 aaPredicted RBP16.07■□□□□ 0.16
PDCD5-202ENST00000379316 TAF6LQ9Y6J9 622 aa16.07■□□□□ 0.16
PDCD5-202ENST00000379316 SLC27A2O14975 620 aa16.06■□□□□ 0.16
PDCD5-202ENST00000379316 CD4P01730 458 aa16.06■□□□□ 0.16
PDCD5-202ENST00000379316 SMARCA1P28370 1054 aa16.06■□□□□ 0.16
PDCD5-202ENST00000379316 ANTXR2P58335 489 aa16.06■□□□□ 0.16
PDCD5-202ENST00000379316 NECTIN1Q15223 517 aa16.06■□□□□ 0.16
PDCD5-202ENST00000379316 CREB3L3Q68CJ9 461 aa16.06■□□□□ 0.16
PDCD5-202ENST00000379316 FAM109BQ6ICB4 259 aaPredicted RBP16.06■□□□□ 0.16
PDCD5-202ENST00000379316 KCNV1Q6PIU1 500 aa16.06■□□□□ 0.16
PDCD5-202ENST00000379316 ZNF654Q8IZM8 581 aa16.06■□□□□ 0.16
PDCD5-202ENST00000379316 TBC1D5Q92609 795 aa16.06■□□□□ 0.16
PDCD5-202ENST00000379316 RNPC3Q96LT9 517 aaKnown RBP16.06■□□□□ 0.16
PDCD5-202ENST00000379316 PIGSQ96S52 555 aa16.06■□□□□ 0.16
PDCD5-202ENST00000379316 LY9Q9HBG7 655 aa16.06■□□□□ 0.16
PDCD5-202ENST00000379316 SEC63Q9UGP8 760 aaKnown RBP16.06■□□□□ 0.16
PDCD5-202ENST00000379316 A6NJR5 290 aa16.05■□□□□ 0.16
PDCD5-202ENST00000379316 GCOM1H8Y6P7 765 aaPredicted RBP16.05■□□□□ 0.16
PDCD5-202ENST00000379316 CDC45O75419 566 aa16.05■□□□□ 0.16
PDCD5-202ENST00000379316 GH1P01241 217 aa16.05■□□□□ 0.16
PDCD5-202ENST00000379316 NR3C2P08235 984 aa16.05■□□□□ 0.16
PDCD5-202ENST00000379316 MYL3P08590 195 aa16.05■□□□□ 0.16
PDCD5-202ENST00000379316 POLR2MP0CAP2 368 aa16.05■□□□□ 0.16
PDCD5-202ENST00000379316 EIF2AK2P19525 551 aaKnown RBP16.05■□□□□ 0.16
PDCD5-202ENST00000379316 ITGB8P26012 769 aa16.05■□□□□ 0.16
PDCD5-202ENST00000379316 LIFRP42702 1097 aa16.05■□□□□ 0.16
PDCD5-202ENST00000379316 SMAD3P84022 425 aaKnown RBP16.05■□□□□ 0.16
PDCD5-202ENST00000379316 PURAQ00577 322 aaKnown RBP16.05■□□□□ 0.16
PDCD5-202ENST00000379316 C9orf50Q5SZB4 431 aa16.05■□□□□ 0.16
PDCD5-202ENST00000379316 RRP36Q96EU6 259 aaKnown RBP16.05■□□□□ 0.16
PDCD5-202ENST00000379316 SPZ1Q9BXG8 430 aa16.05■□□□□ 0.16
PDCD5-202ENST00000379316 HIPK3Q9H422 1215 aa16.05■□□□□ 0.16
PDCD5-202ENST00000379316 PXMP2Q9NR77 195 aa16.05■□□□□ 0.16
PDCD5-202ENST00000379316 COL20A1Q9P218 1284 aa16.05■□□□□ 0.16
PDCD5-202ENST00000379316 KIAA1217Q5T5P2 1943 aa16.05■□□□□ 0.16
PDCD5-202ENST00000379316 PPP1R11O60927 126 aaPredicted RBP16.04■□□□□ 0.16
PDCD5-202ENST00000379316 KRT32Q14532 448 aa16.04■□□□□ 0.16
PDCD5-202ENST00000379316 TMEM63BQ5T3F8 832 aa16.04■□□□□ 0.16
PDCD5-202ENST00000379316 ZNF697Q5TEC3 545 aa16.04■□□□□ 0.16
PDCD5-202ENST00000379316 CCDC62Q6P9F0 684 aa16.04■□□□□ 0.16
PDCD5-202ENST00000379316 SYNE3Q6ZMZ3 975 aa16.04■□□□□ 0.16
PDCD5-202ENST00000379316 SEPT14Q6ZU15 432 aa16.04■□□□□ 0.16
PDCD5-202ENST00000379316 MTIF3Q9H2K0 278 aaKnown RBP16.04■□□□□ 0.16
PDCD5-202ENST00000379316 SENP2Q9HC62 589 aa16.04■□□□□ 0.16
PDCD5-202ENST00000379316 SLC12A7Q9Y666 1083 aa16.04■□□□□ 0.16
PDCD5-202ENST00000379316 SH2B2O14492 632 aaPredicted RBP16.03■□□□□ 0.16
PDCD5-202ENST00000379316 OPLAHO14841 1288 aa16.03■□□□□ 0.16
PDCD5-202ENST00000379316 CYTH3O43739 400 aa16.03■□□□□ 0.16
PDCD5-202ENST00000379316 NEFLP07196 543 aa16.03■□□□□ 0.16
PDCD5-202ENST00000379316 PSMC6P62333 389 aa16.03■□□□□ 0.16
PDCD5-202ENST00000379316 PTPN11Q06124 597 aaPredicted RBP16.03■□□□□ 0.16
PDCD5-202ENST00000379316 NFRKBQ6P4R8 1299 aa16.03■□□□□ 0.16
PDCD5-202ENST00000379316 PSRC1Q6PGN9 363 aaPredicted RBP16.03■□□□□ 0.16
PDCD5-202ENST00000379316 CUL5Q93034 780 aa16.03■□□□□ 0.16
PDCD5-202ENST00000379316 PDCD2LQ9BRP1 358 aa16.03■□□□□ 0.16
PDCD5-202ENST00000379316 PPP1R12CQ9BZL4 782 aa16.03■□□□□ 0.16
PDCD5-202ENST00000379316 ALDH8A1Q9H2A2 487 aaPredicted RBP16.03■□□□□ 0.16
PDCD5-202ENST00000379316 MRVI1Q9Y6F6 885 aa16.03■□□□□ 0.16
PDCD5-202ENST00000379316 GRIN2DO15399 1336 aa16.02■□□□□ 0.16
PDCD5-202ENST00000379316 B4GALT4O60513 344 aa16.02■□□□□ 0.16
PDCD5-202ENST00000379316 STAM2O75886 525 aa16.02■□□□□ 0.16
PDCD5-202ENST00000379316 PTGS1P23219 599 aa16.02■□□□□ 0.16
PDCD5-202ENST00000379316 CCND2P30279 289 aa16.02■□□□□ 0.16
PDCD5-202ENST00000379316 LAMC2Q13753 1193 aa16.02■□□□□ 0.16
PDCD5-202ENST00000379316 TMEM265A0A087WTH1 108 aa16.01■□□□□ 0.15
PDCD5-202ENST00000379316 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.01■□□□□ 0.15
PDCD5-202ENST00000379316 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.01■□□□□ 0.15
PDCD5-202ENST00000379316 ARIH2O95376 493 aa16.01■□□□□ 0.15
PDCD5-202ENST00000379316 MMP3P08254 477 aa16.01■□□□□ 0.15
PDCD5-202ENST00000379316 HMGB1P09429 215 aaKnown RBP16.01■□□□□ 0.15
PDCD5-202ENST00000379316 TGFB3P10600 412 aa16.01■□□□□ 0.15
PDCD5-202ENST00000379316 MYCLP12524 364 aaPredicted RBP16.01■□□□□ 0.15
PDCD5-202ENST00000379316 CSF2RAP15509 400 aa16.01■□□□□ 0.15
PDCD5-202ENST00000379316 CASTP20810 708 aaKnown RBP16.01■□□□□ 0.15
PDCD5-202ENST00000379316 HOXA13P31271 388 aaPredicted RBP16.01■□□□□ 0.15
PDCD5-202ENST00000379316 EPHB4P54760 987 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms