RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 PPIGQ13427 754 aaKnown RBP eCLIP22.01■■□□□ 1.11
TMEM88B-201ENST00000378821 GRM4Q14833 912 aa22.01■■□□□ 1.11
TMEM88B-201ENST00000378821 SLC35G1Q2M3R5 365 aa22.01■■□□□ 1.11
TMEM88B-201ENST00000378821 SAMD3Q8N6K7 520 aa22.01■■□□□ 1.11
TMEM88B-201ENST00000378821 NSUN6Q8TEA1 469 aaKnown RBP22.01■■□□□ 1.11
TMEM88B-201ENST00000378821 RNPC3Q96LT9 517 aaKnown RBP22.01■■□□□ 1.11
TMEM88B-201ENST00000378821 TAAR1Q96RJ0 339 aa22.01■■□□□ 1.11
TMEM88B-201ENST00000378821 AMNQ9BXJ7 453 aa22.01■■□□□ 1.11
TMEM88B-201ENST00000378821 RIOX1Q9H6W3 641 aa22.01■■□□□ 1.11
TMEM88B-201ENST00000378821 MAP3K20Q9NYL2 800 aaKnown RBP22.01■■□□□ 1.11
TMEM88B-201ENST00000378821 KPNA6O60684 536 aa22■■□□□ 1.11
TMEM88B-201ENST00000378821 PPP1R11O60927 126 aaPredicted RBP22■■□□□ 1.11
TMEM88B-201ENST00000378821 TROAPQ12815 778 aa22■■□□□ 1.11
TMEM88B-201ENST00000378821 PPP2R5BQ15173 497 aa22■■□□□ 1.11
TMEM88B-201ENST00000378821 TMEM240Q5SV17 173 aa22■■□□□ 1.11
TMEM88B-201ENST00000378821 ZNF697Q5TEC3 545 aa22■■□□□ 1.11
TMEM88B-201ENST00000378821 TMEM199Q8N511 208 aa22■■□□□ 1.11
TMEM88B-201ENST00000378821 OR6J1Q8NGC5 347 aa22■■□□□ 1.11
TMEM88B-201ENST00000378821 NCOA7Q8NI08 942 aa22■■□□□ 1.11
TMEM88B-201ENST00000378821 VAT1LQ9HCJ6 419 aa22■■□□□ 1.11
TMEM88B-201ENST00000378821 ZBTB5O15062 677 aa21.99■■□□□ 1.11
TMEM88B-201ENST00000378821 B4GALT4O60513 344 aa21.99■■□□□ 1.11
TMEM88B-201ENST00000378821 CSF2RAP15509 400 aa21.99■■□□□ 1.11
TMEM88B-201ENST00000378821 PSMC6P62333 389 aa21.99■■□□□ 1.11
TMEM88B-201ENST00000378821 MB21D2Q8IYB1 491 aaPredicted RBP21.99■■□□□ 1.11
TMEM88B-201ENST00000378821 IGDCC4Q8TDY8 1250 aa21.99■■□□□ 1.11
TMEM88B-201ENST00000378821 RMDN3Q96TC7 470 aa21.99■■□□□ 1.11
TMEM88B-201ENST00000378821 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.99■■□□□ 1.11
TMEM88B-201ENST00000378821 MTA3Q9BTC8 594 aa21.99■■□□□ 1.11
TMEM88B-201ENST00000378821 TRPV6Q9H1D0 765 aa21.99■■□□□ 1.11
TMEM88B-201ENST00000378821 ALDH8A1Q9H2A2 487 aaPredicted RBP21.99■■□□□ 1.11
TMEM88B-201ENST00000378821 SEMA6BQ9H3T3 888 aa21.99■■□□□ 1.11
TMEM88B-201ENST00000378821 SENP2Q9HC62 589 aa21.99■■□□□ 1.11
TMEM88B-201ENST00000378821 TMEM265A0A087WTH1 108 aa21.98■■□□□ 1.11
TMEM88B-201ENST00000378821 IFIT3O14879 490 aaKnown RBP21.98■■□□□ 1.11
TMEM88B-201ENST00000378821 SLC27A2O14975 620 aa21.98■■□□□ 1.11
TMEM88B-201ENST00000378821 ARIH2O95376 493 aa21.98■■□□□ 1.11
TMEM88B-201ENST00000378821 TXNP10599 105 aaKnown RBP21.98■■□□□ 1.11
TMEM88B-201ENST00000378821 CYP2C18P33260 490 aa21.98■■□□□ 1.11
TMEM88B-201ENST00000378821 ANTXR2P58335 489 aa21.98■■□□□ 1.11
TMEM88B-201ENST00000378821 TTLL4Q14679 1199 aa21.98■■□□□ 1.11
TMEM88B-201ENST00000378821 MTG1Q9BT17 334 aaPredicted RBP21.98■■□□□ 1.11
TMEM88B-201ENST00000378821 NOC4LQ9BVI4 516 aaKnown RBP21.98■■□□□ 1.11
TMEM88B-201ENST00000378821 HIPK3Q9H422 1215 aa21.98■■□□□ 1.11
TMEM88B-201ENST00000378821 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.97■■□□□ 1.11
TMEM88B-201ENST00000378821 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.97■■□□□ 1.11
TMEM88B-201ENST00000378821 DHX16O60231 1041 aaKnown RBP21.97■■□□□ 1.11
TMEM88B-201ENST00000378821 NECTIN1Q15223 517 aa21.97■■□□□ 1.11
TMEM88B-201ENST00000378821 STXBP2Q15833 593 aa21.97■■□□□ 1.11
TMEM88B-201ENST00000378821 BRDTQ58F21 947 aaPredicted RBP21.97■■□□□ 1.11
TMEM88B-201ENST00000378821 CREB3L3Q68CJ9 461 aa21.97■■□□□ 1.11
TMEM88B-201ENST00000378821 RALYLQ86SE5 291 aaKnown RBP21.97■■□□□ 1.11
TMEM88B-201ENST00000378821 COPS5Q92905 334 aa21.97■■□□□ 1.11
TMEM88B-201ENST00000378821 MAP3K14Q99558 947 aa21.97■■□□□ 1.11
TMEM88B-201ENST00000378821 TTYH1Q9H313 450 aaPredicted RBP21.97■■□□□ 1.11
TMEM88B-201ENST00000378821 IL23AQ9NPF7 189 aa21.97■■□□□ 1.11
TMEM88B-201ENST00000378821 ERICH2A1L162 156 aa21.96■■□□□ 1.11
TMEM88B-201ENST00000378821 CYTH3O43739 400 aa21.96■■□□□ 1.11
TMEM88B-201ENST00000378821 EIF3JO75822 258 aaKnown RBP21.96■■□□□ 1.11
TMEM88B-201ENST00000378821 WTAPQ15007 396 aa21.96■■□□□ 1.11
TMEM88B-201ENST00000378821 SART3Q15020 963 aaKnown RBP21.96■■□□□ 1.11
TMEM88B-201ENST00000378821 NFRKBQ6P4R8 1299 aa21.96■■□□□ 1.11
TMEM88B-201ENST00000378821 PPP1R12CQ9BZL4 782 aa21.96■■□□□ 1.11
TMEM88B-201ENST00000378821 PXMP2Q9NR77 195 aa21.96■■□□□ 1.11
TMEM88B-201ENST00000378821 PCDHA1Q9Y5I3 950 aa21.96■■□□□ 1.11
TMEM88B-201ENST00000378821 SUPT20HL2P0C7V6 817 aa21.95■■□□□ 1.1
TMEM88B-201ENST00000378821 PTPN11Q06124 597 aaPredicted RBP21.95■■□□□ 1.1
TMEM88B-201ENST00000378821 TRAF1Q13077 416 aa21.95■■□□□ 1.1
TMEM88B-201ENST00000378821 PSRC1Q6PGN9 363 aaPredicted RBP21.95■■□□□ 1.1
TMEM88B-201ENST00000378821 SLC17A8Q8NDX2 589 aa21.95■■□□□ 1.1
TMEM88B-201ENST00000378821 HERVK_113Q902F9 699 aa21.95■■□□□ 1.1
TMEM88B-201ENST00000378821 EMID1Q96A84 441 aaPredicted RBP21.95■■□□□ 1.1
TMEM88B-201ENST00000378821 VWCEQ96DN2 955 aa21.95■■□□□ 1.1
TMEM88B-201ENST00000378821 UMODL1Q5DID0 1318 aa21.95■■□□□ 1.1
TMEM88B-201ENST00000378821 CFBP00751 764 aa21.94■■□□□ 1.1
TMEM88B-201ENST00000378821 NR3C2P08235 984 aa21.94■■□□□ 1.1
TMEM88B-201ENST00000378821 MYL3P08590 195 aa21.94■■□□□ 1.1
TMEM88B-201ENST00000378821 ARHGAP1Q07960 439 aa21.94■■□□□ 1.1
TMEM88B-201ENST00000378821 ARHGEF16Q5VV41 709 aa21.94■■□□□ 1.1
TMEM88B-201ENST00000378821 ZNF365Q70YC5 407 aa21.94■■□□□ 1.1
TMEM88B-201ENST00000378821 CHST3Q7LGC8 479 aa21.94■■□□□ 1.1
TMEM88B-201ENST00000378821 CDX2Q99626 313 aaPredicted RBP21.94■■□□□ 1.1
TMEM88B-201ENST00000378821 WNT8AQ9H1J5 351 aa21.94■■□□□ 1.1
TMEM88B-201ENST00000378821 GPHNQ9NQX3 736 aaPredicted RBP21.94■■□□□ 1.1
TMEM88B-201ENST00000378821 DDX41Q9UJV9 622 aaKnown RBP21.94■■□□□ 1.1
TMEM88B-201ENST00000378821 BAZ2BQ9UIF8 2168 aaKnown RBP21.94■■□□□ 1.1
TMEM88B-201ENST00000378821 PNMA6FA0A0J9YX94 578 aa21.93■■□□□ 1.1
TMEM88B-201ENST00000378821 SMARCA1P28370 1054 aa21.93■■□□□ 1.1
TMEM88B-201ENST00000378821 COL9A3Q14050 684 aaPredicted RBP21.93■■□□□ 1.1
TMEM88B-201ENST00000378821 LY6KQ17RY6 165 aa21.93■■□□□ 1.1
TMEM88B-201ENST00000378821 NBPF20Q3BBV1 942 aa21.93■■□□□ 1.1
TMEM88B-201ENST00000378821 TMEM67Q5HYA8 995 aa21.93■■□□□ 1.1
TMEM88B-201ENST00000378821 SEPT14Q6ZU15 432 aa21.93■■□□□ 1.1
TMEM88B-201ENST00000378821 FAM161BQ96MY7 647 aa21.93■■□□□ 1.1
TMEM88B-201ENST00000378821 PIGSQ96S52 555 aa21.93■■□□□ 1.1
TMEM88B-201ENST00000378821 PDCD2LQ9BRP1 358 aa21.93■■□□□ 1.1
TMEM88B-201ENST00000378821 LY9Q9HBG7 655 aa21.93■■□□□ 1.1
TMEM88B-201ENST00000378821 TRMT13Q9NUP7 481 aaKnown RBP21.93■■□□□ 1.1
TMEM88B-201ENST00000378821 RGS20O76081 388 aa21.92■■□□□ 1.1
TMEM88B-201ENST00000378821 GH1P01241 217 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms