RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 RASSF9O75901 435 aa17.56■□□□□ 0.4
CKAP4-201ENST00000378026 RHOBTB3O94955 611 aa17.56■□□□□ 0.4
CKAP4-201ENST00000378026 PRLRP16471 622 aa17.56■□□□□ 0.4
CKAP4-201ENST00000378026 CCNE1P24864 410 aa17.56■□□□□ 0.4
CKAP4-201ENST00000378026 QPCTQ16769 361 aa17.56■□□□□ 0.4
CKAP4-201ENST00000378026 NOX5Q96PH1 765 aa17.56■□□□□ 0.4
CKAP4-201ENST00000378026 VEZTQ9HBM0 779 aa17.56■□□□□ 0.4
CKAP4-201ENST00000378026 CNTNAP5Q8WYK1 1306 aa17.56■□□□□ 0.4
CKAP4-201ENST00000378026 OPLAHO14841 1288 aa17.55■□□□□ 0.4
CKAP4-201ENST00000378026 DYNLL1P63167 89 aaKnown RBP17.55■□□□□ 0.4
CKAP4-201ENST00000378026 ARID5AQ03989 594 aa17.55■□□□□ 0.4
CKAP4-201ENST00000378026 EHHADHQ08426 723 aa17.55■□□□□ 0.4
CKAP4-201ENST00000378026 KIF1AQ12756 1690 aa17.55■□□□□ 0.4
CKAP4-201ENST00000378026 ITGB3BPQ13352 177 aaPredicted RBP17.55■□□□□ 0.4
CKAP4-201ENST00000378026 ZNF572Q7Z3I7 529 aaPredicted RBP17.55■□□□□ 0.4
CKAP4-201ENST00000378026 CACNA2D4Q7Z3S7 1137 aa17.55■□□□□ 0.4
CKAP4-201ENST00000378026 TANGO6Q9C0B7 1094 aa17.55■□□□□ 0.4
CKAP4-201ENST00000378026 GDF3Q9NR23 364 aa17.55■□□□□ 0.4
CKAP4-201ENST00000378026 DNM1LO00429 736 aa17.55■□□□□ 0.4
CKAP4-201ENST00000378026 PALMO75781 387 aa17.55■□□□□ 0.4
CKAP4-201ENST00000378026 SNCBQ16143 134 aa17.55■□□□□ 0.4
CKAP4-201ENST00000378026 INF2Q27J81 1249 aa17.55■□□□□ 0.4
CKAP4-201ENST00000378026 PREPLQ4J6C6 727 aaPredicted RBP17.55■□□□□ 0.4
CKAP4-201ENST00000378026 DDX42Q86XP3 938 aaKnown RBP eCLIP17.55■□□□□ 0.4
CKAP4-201ENST00000378026 C4orf32Q8N8J7 132 aa17.55■□□□□ 0.4
CKAP4-201ENST00000378026 RBM28Q9NW13 759 aaKnown RBP17.55■□□□□ 0.4
CKAP4-201ENST00000378026 DDX20Q9UHI6 824 aaKnown RBP17.55■□□□□ 0.4
CKAP4-201ENST00000378026 RPAINQ86UA6 219 aa17.54■□□□□ 0.4
CKAP4-201ENST00000378026 ZCRB1Q8TBF4 217 aaKnown RBP17.54■□□□□ 0.4
CKAP4-201ENST00000378026 DHTKD1Q96HY7 919 aaPredicted RBP17.54■□□□□ 0.4
CKAP4-201ENST00000378026 A1CFQ9NQ94 594 aaKnown RBP17.54■□□□□ 0.4
CKAP4-201ENST00000378026 ATXN2Q99700 1313 aaKnown RBP17.54■□□□□ 0.4
CKAP4-201ENST00000378026 RCAN1P53805 252 aa17.54■□□□□ 0.4
CKAP4-201ENST00000378026 KCNB1Q14721 858 aa17.54■□□□□ 0.4
CKAP4-201ENST00000378026 CYB5D1Q6P9G0 228 aa17.54■□□□□ 0.4
CKAP4-201ENST00000378026 YTHDF3Q7Z739 585 aaKnown RBP17.54■□□□□ 0.4
CKAP4-201ENST00000378026 PARP9Q8IXQ6 854 aa17.54■□□□□ 0.4
CKAP4-201ENST00000378026 OSBPL7Q9BZF2 842 aa17.54■□□□□ 0.4
CKAP4-201ENST00000378026 CLGNO14967 610 aa17.53■□□□□ 0.4
CKAP4-201ENST00000378026 KIF1CO43896 1103 aaKnown RBP17.53■□□□□ 0.4
CKAP4-201ENST00000378026 PLCG1P19174 1290 aa17.53■□□□□ 0.4
CKAP4-201ENST00000378026 PPP2R5BQ15173 497 aa17.53■□□□□ 0.4
CKAP4-201ENST00000378026 FAM114A1Q8IWE2 563 aa17.53■□□□□ 0.4
CKAP4-201ENST00000378026 NDST4Q9H3R1 872 aa17.53■□□□□ 0.4
CKAP4-201ENST00000378026 CHD4Q14839 1912 aa17.53■□□□□ 0.4
CKAP4-201ENST00000378026 MAGEB6P1A0A0J9YX57 407 aa17.53■□□□□ 0.4
CKAP4-201ENST00000378026 CCDC194A0A1B0GVG4 234 aa17.53■□□□□ 0.4
CKAP4-201ENST00000378026 BICDL2A1A5D9 508 aa17.53■□□□□ 0.4
CKAP4-201ENST00000378026 RAD51CO43502 376 aa17.53■□□□□ 0.4
CKAP4-201ENST00000378026 TRIM28Q13263 835 aaKnown RBP17.53■□□□□ 0.4
CKAP4-201ENST00000378026 BLIDQ8IZY5 108 aa17.53■□□□□ 0.4
CKAP4-201ENST00000378026 RUBCNQ92622 972 aa17.53■□□□□ 0.4
CKAP4-201ENST00000378026 ERGIC2Q96RQ1 377 aa17.53■□□□□ 0.4
CKAP4-201ENST00000378026 PPP2R5AQ15172 486 aa17.53■□□□□ 0.4
CKAP4-201ENST00000378026 FUKQ8N0W3 1084 aa17.53■□□□□ 0.4
CKAP4-201ENST00000378026 MIEF2Q96C03 454 aa17.53■□□□□ 0.4
CKAP4-201ENST00000378026 TBC1D31Q96DN5 1066 aa17.53■□□□□ 0.4
CKAP4-201ENST00000378026 SLC24A3Q9HC58 644 aa17.53■□□□□ 0.4
CKAP4-201ENST00000378026 GMNCA6NCL1 334 aa17.52■□□□□ 0.4
CKAP4-201ENST00000378026 HMGB1P1B2RPK0 211 aaPredicted RBP17.52■□□□□ 0.4
CKAP4-201ENST00000378026 GCOM1H8Y6P7 765 aaPredicted RBP17.52■□□□□ 0.4
CKAP4-201ENST00000378026 PPP1R12BO60237 982 aaPredicted RBP17.52■□□□□ 0.4
CKAP4-201ENST00000378026 MYZAPP0CAP1 466 aa17.52■□□□□ 0.4
CKAP4-201ENST00000378026 PAX7P23759 505 aa17.52■□□□□ 0.4
CKAP4-201ENST00000378026 TRAPPC10P48553 1259 aa17.52■□□□□ 0.4
CKAP4-201ENST00000378026 ARL6IP4Q66PJ3 421 aaKnown RBP17.52■□□□□ 0.4
CKAP4-201ENST00000378026 FAM228AQ86W67 206 aa17.52■□□□□ 0.4
CKAP4-201ENST00000378026 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.52■□□□□ 0.4
CKAP4-201ENST00000378026 TPX2Q9ULW0 747 aaKnown RBP17.52■□□□□ 0.4
CKAP4-201ENST00000378026 PNPLA7Q6ZV29 1317 aa17.52■□□□□ 0.4
CKAP4-201ENST00000378026 NEBLO76041 1014 aa17.52■□□□□ 0.39
CKAP4-201ENST00000378026 FGFR2P21802 821 aa17.52■□□□□ 0.39
CKAP4-201ENST00000378026 CDK17Q00537 523 aa17.52■□□□□ 0.39
CKAP4-201ENST00000378026 VWA3BQ502W6 1294 aa17.52■□□□□ 0.39
CKAP4-201ENST00000378026 GLE1Q53GS7 698 aaKnown RBP17.52■□□□□ 0.39
CKAP4-201ENST00000378026 GIGYF2Q6Y7W6 1299 aaKnown RBP17.52■□□□□ 0.39
CKAP4-201ENST00000378026 CCDC47Q96A33 483 aaKnown RBP17.52■□□□□ 0.39
CKAP4-201ENST00000378026 SEMA6BQ9H3T3 888 aa17.52■□□□□ 0.39
CKAP4-201ENST00000378026 GOLPH3Q9H4A6 298 aa17.52■□□□□ 0.39
CKAP4-201ENST00000378026 KBTBD4Q9NVX7 518 aa17.52■□□□□ 0.39
CKAP4-201ENST00000378026 NUP188Q5SRE5 1749 aa17.51■□□□□ 0.39
CKAP4-201ENST00000378026 A0A1W2PQJ5 194 aa17.51■□□□□ 0.39
CKAP4-201ENST00000378026 TNFRSF8P28908 595 aa17.51■□□□□ 0.39
CKAP4-201ENST00000378026 C6orf89Q6UWU4 347 aa17.51■□□□□ 0.39
CKAP4-201ENST00000378026 UBLCP1Q8WVY7 318 aaPredicted RBP17.51■□□□□ 0.39
CKAP4-201ENST00000378026 MYH2Q9UKX2 1941 aa17.51■□□□□ 0.39
CKAP4-201ENST00000378026 PHF20L1A8MW92 1017 aa17.51■□□□□ 0.39
CKAP4-201ENST00000378026 CTNNA1P35221 906 aaKnown RBP17.51■□□□□ 0.39
CKAP4-201ENST00000378026 CLNS1AP54105 237 aaKnown RBP17.51■□□□□ 0.39
CKAP4-201ENST00000378026 CABP7Q86V35 215 aa17.51■□□□□ 0.39
CKAP4-201ENST00000378026 DNAAF5Q86Y56 855 aa17.51■□□□□ 0.39
CKAP4-201ENST00000378026 TRIM9Q9C026 710 aa17.51■□□□□ 0.39
CKAP4-201ENST00000378026 TMBIM4Q9HC24 238 aa17.51■□□□□ 0.39
CKAP4-201ENST00000378026 ASAP1Q9ULH1 1129 aa17.51■□□□□ 0.39
CKAP4-201ENST00000378026 SIK3Q9Y2K2 1263 aa17.51■□□□□ 0.39
CKAP4-201ENST00000378026 CAMTA1Q9Y6Y1 1673 aa17.5■□□□□ 0.39
CKAP4-201ENST00000378026 DISP2A7MBM2 1401 aa17.5■□□□□ 0.39
CKAP4-201ENST00000378026 USP17L12C9JPN9 530 aa17.5■□□□□ 0.39
CKAP4-201ENST00000378026 USP17L21D6R901 530 aa17.5■□□□□ 0.39
CKAP4-201ENST00000378026 HSD17B3P37058 310 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms