RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 DMP1Q13316 513 aaPredicted RBP11.86□□□□□ -0.51
HIF3A-205ENST00000377670 PPP2R5AQ15172 486 aa11.86□□□□□ -0.51
HIF3A-205ENST00000377670 APOA5Q6Q788 366 aa11.86□□□□□ -0.51
HIF3A-205ENST00000377670 CYP26C1Q6V0L0 522 aa11.86□□□□□ -0.51
HIF3A-205ENST00000377670 FAM160B2Q86V87 743 aa11.86□□□□□ -0.51
HIF3A-205ENST00000377670 SLFN12Q8IYM2 578 aa11.86□□□□□ -0.51
HIF3A-205ENST00000377670 SLC17A8Q8NDX2 589 aa11.86□□□□□ -0.51
HIF3A-205ENST00000377670 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.86□□□□□ -0.51
HIF3A-205ENST00000377670 DENND3A2RUS2 1198 aa11.86□□□□□ -0.51
HIF3A-205ENST00000377670 PFKFB1P16118 471 aa11.86□□□□□ -0.51
HIF3A-205ENST00000377670 SLC16A2P36021 539 aa11.86□□□□□ -0.51
HIF3A-205ENST00000377670 GPATCH4Q5T3I0 446 aaKnown RBP11.86□□□□□ -0.51
HIF3A-205ENST00000377670 C4orf50Q6ZRC1 276 aa11.86□□□□□ -0.51
HIF3A-205ENST00000377670 RYBPQ8N488 228 aaPredicted RBP11.86□□□□□ -0.51
HIF3A-205ENST00000377670 IRAK4Q9NWZ3 460 aa11.86□□□□□ -0.51
HIF3A-205ENST00000377670 ZMYM6O95789 1325 aa11.86□□□□□ -0.51
HIF3A-205ENST00000377670 USP17L5A8MUK1 530 aa11.86□□□□□ -0.51
HIF3A-205ENST00000377670 TUBB2AQ13885 445 aa11.86□□□□□ -0.51
HIF3A-205ENST00000377670 CACNA2D3Q8IZS8 1091 aa11.86□□□□□ -0.51
HIF3A-205ENST00000377670 TUBB2BQ9BVA1 445 aa11.86□□□□□ -0.51
HIF3A-205ENST00000377670 NT5C3AQ9H0P0 336 aa11.86□□□□□ -0.51
HIF3A-205ENST00000377670 ANXA13P27216 316 aa11.86□□□□□ -0.51
HIF3A-205ENST00000377670 CRKP46108 304 aa11.86□□□□□ -0.51
HIF3A-205ENST00000377670 CALCOCO2Q13137 446 aa11.86□□□□□ -0.51
HIF3A-205ENST00000377670 NOSTRINQ8IVI9 506 aa11.86□□□□□ -0.51
HIF3A-205ENST00000377670 NELFCDQ8IXH7 590 aa11.86□□□□□ -0.51
HIF3A-205ENST00000377670 MICALL2Q8IY33 904 aa11.86□□□□□ -0.51
HIF3A-205ENST00000377670 ELP3Q9H9T3 547 aa11.86□□□□□ -0.51
HIF3A-205ENST00000377670 MKRN1Q9UHC7 482 aaKnown RBP11.86□□□□□ -0.51
HIF3A-205ENST00000377670 CUTAO60888 179 aa11.86□□□□□ -0.51
HIF3A-205ENST00000377670 CYP2D6P10635 497 aa11.86□□□□□ -0.51
HIF3A-205ENST00000377670 CCDC26Q8TAB7 109 aa11.86□□□□□ -0.51
HIF3A-205ENST00000377670 FAM49AQ9H0Q0 323 aaPredicted RBP11.86□□□□□ -0.51
HIF3A-205ENST00000377670 ANKFY1Q9P2R3 1169 aa11.86□□□□□ -0.51
HIF3A-205ENST00000377670 NECTIN1Q15223 517 aa11.85□□□□□ -0.51
HIF3A-205ENST00000377670 NOP9Q86U38 636 aaKnown RBP11.85□□□□□ -0.51
HIF3A-205ENST00000377670 IMPACTQ9P2X3 320 aa11.85□□□□□ -0.51
HIF3A-205ENST00000377670 PCDHA7Q9UN72 937 aa11.85□□□□□ -0.51
HIF3A-205ENST00000377670 TECP42680 631 aa11.85□□□□□ -0.51
HIF3A-205ENST00000377670 NR5A1Q13285 461 aa11.85□□□□□ -0.51
HIF3A-205ENST00000377670 ARMCX5Q6P1M9 558 aa11.85□□□□□ -0.51
HIF3A-205ENST00000377670 KCTD1Q719H9 257 aa11.85□□□□□ -0.51
HIF3A-205ENST00000377670 YAF2Q8IY57 180 aa11.85□□□□□ -0.51
HIF3A-205ENST00000377670 NSUN7Q8NE18 718 aaKnown RBP11.85□□□□□ -0.51
HIF3A-205ENST00000377670 PARK7Q99497 189 aaKnown RBP11.85□□□□□ -0.51
HIF3A-205ENST00000377670 BRIP1Q9BX63 1249 aa11.85□□□□□ -0.51
HIF3A-205ENST00000377670 CACYBPQ9HB71 228 aaKnown RBP11.85□□□□□ -0.51
HIF3A-205ENST00000377670 ATP8B3O60423 1300 aa11.85□□□□□ -0.51
HIF3A-205ENST00000377670 SOS2Q07890 1332 aaPredicted RBP11.85□□□□□ -0.51
HIF3A-205ENST00000377670 KDM3AQ9Y4C1 1321 aa11.85□□□□□ -0.51
HIF3A-205ENST00000377670 ZNF500O60304 480 aaPredicted RBP11.85□□□□□ -0.51
HIF3A-205ENST00000377670 CABS1Q96KC9 395 aa11.85□□□□□ -0.51
HIF3A-205ENST00000377670 CNOT7Q9UIV1 285 aaKnown RBP11.85□□□□□ -0.51
HIF3A-205ENST00000377670 CDC25AP30304 524 aa11.85□□□□□ -0.51
HIF3A-205ENST00000377670 NDUFA8P51970 172 aa11.85□□□□□ -0.51
HIF3A-205ENST00000377670 FOXO4P98177 505 aa11.85□□□□□ -0.51
HIF3A-205ENST00000377670 NEDD9Q14511 834 aa11.85□□□□□ -0.51
HIF3A-205ENST00000377670 MAP7D1Q3KQU3 841 aa11.85□□□□□ -0.51
HIF3A-205ENST00000377670 ZNRF3Q9ULT6 936 aa11.85□□□□□ -0.51
HIF3A-205ENST00000377670 COL15A1P39059 1388 aa11.85□□□□□ -0.51
HIF3A-205ENST00000377670 MED23Q9ULK4 1368 aa11.85□□□□□ -0.51
HIF3A-205ENST00000377670 POSTNQ15063 836 aa11.85□□□□□ -0.51
HIF3A-205ENST00000377670 URGCPQ8TCY9 931 aa11.85□□□□□ -0.51
HIF3A-205ENST00000377670 GDAP1L1Q96MZ0 367 aa11.85□□□□□ -0.51
HIF3A-205ENST00000377670 MMP19Q99542 508 aa11.85□□□□□ -0.51
HIF3A-205ENST00000377670 NFE2L3Q9Y4A8 694 aa11.85□□□□□ -0.51
HIF3A-205ENST00000377670 PCDHB13Q9Y5F0 798 aa11.85□□□□□ -0.51
HIF3A-205ENST00000377670 ESYT2A0FGR8 921 aa11.84□□□□□ -0.51
HIF3A-205ENST00000377670 MROH2AA6NES4 1674 aa11.84□□□□□ -0.51
HIF3A-205ENST00000377670 ALDH3A1P30838 453 aa11.84□□□□□ -0.51
HIF3A-205ENST00000377670 TPD52P55327 224 aaPredicted RBP11.84□□□□□ -0.51
HIF3A-205ENST00000377670 CUL4BQ13620 913 aa11.84□□□□□ -0.51
HIF3A-205ENST00000377670 ATL3Q6DD88 541 aa11.84□□□□□ -0.51
HIF3A-205ENST00000377670 PPP1R21Q6ZMI0 780 aa11.84□□□□□ -0.51
HIF3A-205ENST00000377670 IFT20Q8IY31 132 aa11.84□□□□□ -0.51
HIF3A-205ENST00000377670 CPVLQ9H3G5 476 aa11.84□□□□□ -0.51
HIF3A-205ENST00000377670 TBC1D8BQ0IIM8 1120 aa11.84□□□□□ -0.51
HIF3A-205ENST00000377670 PLCB4Q15147 1175 aa11.84□□□□□ -0.51
HIF3A-205ENST00000377670 SLC15A2Q16348 729 aa11.84□□□□□ -0.51
HIF3A-205ENST00000377670 GEN1Q17RS7 908 aa11.84□□□□□ -0.51
HIF3A-205ENST00000377670 TBC1D31Q96DN5 1066 aa11.84□□□□□ -0.51
HIF3A-205ENST00000377670 TDRD3Q9H7E2 651 aaKnown RBP11.84□□□□□ -0.51
HIF3A-205ENST00000377670 MINPP1Q9UNW1 487 aa11.84□□□□□ -0.51
HIF3A-205ENST00000377670 ITKQ08881 620 aa11.84□□□□□ -0.51
HIF3A-205ENST00000377670 ZNF449Q6P9G9 518 aa11.84□□□□□ -0.51
HIF3A-205ENST00000377670 USP17L2Q6R6M4 530 aa11.84□□□□□ -0.51
HIF3A-205ENST00000377670 NOC4LQ9BVI4 516 aaKnown RBP11.84□□□□□ -0.51
HIF3A-205ENST00000377670 FAM196BA6NMK8 535 aa11.84□□□□□ -0.51
HIF3A-205ENST00000377670 PPP2R5DQ14738 602 aa11.84□□□□□ -0.51
HIF3A-205ENST00000377670 PARD3BQ8TEW8 1205 aa11.84□□□□□ -0.51
HIF3A-205ENST00000377670 TAB2Q9NYJ8 693 aa11.84□□□□□ -0.51
HIF3A-205ENST00000377670 RIPOR2Q9Y4F9 1068 aa11.84□□□□□ -0.51
HIF3A-205ENST00000377670 K7ENM7 598 aa11.83□□□□□ -0.51
HIF3A-205ENST00000377670 FCER1AP12319 257 aa11.83□□□□□ -0.51
HIF3A-205ENST00000377670 ATP5DP30049 168 aa11.83□□□□□ -0.51
HIF3A-205ENST00000377670 DMTNQ08495 405 aa11.83□□□□□ -0.51
HIF3A-205ENST00000377670 ERCC6LQ2NKX8 1250 aa11.83□□□□□ -0.51
HIF3A-205ENST00000377670 ASPRV1Q53RT3 343 aa11.83□□□□□ -0.51
HIF3A-205ENST00000377670 SEL1L2Q5TEA6 688 aa11.83□□□□□ -0.51
HIF3A-205ENST00000377670 C9orf131Q5VYM1 1079 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms