RNA–Protein interactions for RNA: ENST00000377475.7

SEC23B-204, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-204ENST00000377475 SFI1A8K8P3 1242 aa12.8□□□□□ -0.36
SEC23B-204ENST00000377475 CAMTA2O94983 1202 aa12.8□□□□□ -0.36
SEC23B-204ENST00000377475 BAG3O95817 575 aa12.8□□□□□ -0.36
SEC23B-204ENST00000377475 USP8P40818 1118 aa12.8□□□□□ -0.36
SEC23B-204ENST00000377475 SCNN1DP51172 638 aa12.8□□□□□ -0.36
SEC23B-204ENST00000377475 GUCY1A3Q02108 690 aa12.8□□□□□ -0.36
SEC23B-204ENST00000377475 DDX42Q86XP3 938 aaKnown RBP eCLIP12.8□□□□□ -0.36
SEC23B-204ENST00000377475 FAM114A1Q8IWE2 563 aa12.8□□□□□ -0.36
SEC23B-204ENST00000377475 TSG101Q99816 390 aa12.8□□□□□ -0.36
SEC23B-204ENST00000377475 RBM12Q9NTZ6 932 aaKnown RBP12.8□□□□□ -0.36
SEC23B-204ENST00000377475 TMEM110-MUSTN1A8MSY1 372 aa12.8□□□□□ -0.36
SEC23B-204ENST00000377475 HEXIM1O94992 359 aaKnown RBP12.8□□□□□ -0.36
SEC23B-204ENST00000377475 NTSR2O95665 410 aa12.8□□□□□ -0.36
SEC23B-204ENST00000377475 ABCB4P21439 1286 aa12.8□□□□□ -0.36
SEC23B-204ENST00000377475 CCNE1P24864 410 aa12.8□□□□□ -0.36
SEC23B-204ENST00000377475 PBX1P40424 430 aa12.8□□□□□ -0.36
SEC23B-204ENST00000377475 VAV2P52735 878 aa12.8□□□□□ -0.36
SEC23B-204ENST00000377475 ZBED6P86452 979 aa12.8□□□□□ -0.36
SEC23B-204ENST00000377475 NFIXQ14938 502 aa12.8□□□□□ -0.36
SEC23B-204ENST00000377475 NEK8Q86SG6 692 aa12.8□□□□□ -0.36
SEC23B-204ENST00000377475 SPATA4Q8NEY3 305 aa12.8□□□□□ -0.36
SEC23B-204ENST00000377475 SPATA20Q8TB22 786 aa12.8□□□□□ -0.36
SEC23B-204ENST00000377475 DPH5Q9H2P9 285 aa12.8□□□□□ -0.36
SEC23B-204ENST00000377475 PKD2L1Q9P0L9 805 aa12.8□□□□□ -0.36
SEC23B-204ENST00000377475 CHMP2AO43633 222 aa12.79□□□□□ -0.36
SEC23B-204ENST00000377475 EEF1GP26641 437 aaKnown RBP12.79□□□□□ -0.36
SEC23B-204ENST00000377475 CACNB3P54284 484 aa12.79□□□□□ -0.36
SEC23B-204ENST00000377475 NKX1-1Q15270 411 aaPredicted RBP12.79□□□□□ -0.36
SEC23B-204ENST00000377475 USH1GQ495M9 461 aa12.79□□□□□ -0.36
SEC23B-204ENST00000377475 TRAPPC11Q7Z392 1133 aa12.79□□□□□ -0.36
SEC23B-204ENST00000377475 LRRC15Q8TF66 581 aa12.79□□□□□ -0.36
SEC23B-204ENST00000377475 UBLCP1Q8WVY7 318 aaPredicted RBP12.79□□□□□ -0.36
SEC23B-204ENST00000377475 CAPN11Q9UMQ6 739 aa12.79□□□□□ -0.36
SEC23B-204ENST00000377475 ERVV-1B6SEH8 477 aa12.79□□□□□ -0.36
SEC23B-204ENST00000377475 CARSP49589 748 aaKnown RBP12.79□□□□□ -0.36
SEC23B-204ENST00000377475 SEC24CP53992 1094 aa12.79□□□□□ -0.36
SEC23B-204ENST00000377475 CEP85LQ5SZL2 805 aa12.79□□□□□ -0.36
SEC23B-204ENST00000377475 MSANTD4Q8NCY6 345 aa12.79□□□□□ -0.36
SEC23B-204ENST00000377475 ZNF512BQ96KM6 892 aaPredicted RBP12.79□□□□□ -0.36
SEC23B-204ENST00000377475 CAPN7Q9Y6W3 813 aa12.79□□□□□ -0.36
SEC23B-204ENST00000377475 LAMA4Q16363 1823 aa12.79□□□□□ -0.36
SEC23B-204ENST00000377475 CAMTA1Q9Y6Y1 1673 aa12.79□□□□□ -0.36
SEC23B-204ENST00000377475 GOLGA6L10A6NI86 522 aa12.79□□□□□ -0.36
SEC23B-204ENST00000377475 E9PMD0 336 aa12.79□□□□□ -0.36
SEC23B-204ENST00000377475 ACTN1P12814 892 aa12.79□□□□□ -0.36
SEC23B-204ENST00000377475 BTDP43251 543 aa12.79□□□□□ -0.36
SEC23B-204ENST00000377475 UBE4AQ14139 1066 aa12.79□□□□□ -0.36
SEC23B-204ENST00000377475 CNNM4Q6P4Q7 775 aa12.79□□□□□ -0.36
SEC23B-204ENST00000377475 OSBPL9Q96SU4 736 aa12.79□□□□□ -0.36
SEC23B-204ENST00000377475 DUSP9Q99956 384 aaKnown RBP12.79□□□□□ -0.36
SEC23B-204ENST00000377475 ARHGAP20Q9P2F6 1191 aa12.79□□□□□ -0.36
SEC23B-204ENST00000377475 KIAA1024Q9UPX6 916 aa12.79□□□□□ -0.36
SEC23B-204ENST00000377475 MYMKA6NI61 221 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 PALMO75781 387 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 UFL1O94874 794 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 SYF2O95926 243 aaKnown RBP12.78□□□□□ -0.36
SEC23B-204ENST00000377475 STAT3P40763 770 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 KLHL30Q0D2K2 578 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 TTI2Q6NXR4 508 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 DDX12PQ92771 950 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 CEP95Q96GE4 821 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 PACSIN1Q9BY11 444 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 MED4Q9NPJ6 270 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 ARPP21Q9UBL0 812 aaPredicted RBP12.78□□□□□ -0.36
SEC23B-204ENST00000377475 PCDHB13Q9Y5F0 798 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 ZNF263O14978 683 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 PPP2R5BQ15173 497 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 TTBK2Q6IQ55 1244 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 RCSD1Q6JBY9 416 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 CCNI2Q6ZMN8 369 aaPredicted RBP12.78□□□□□ -0.36
SEC23B-204ENST00000377475 PACS2Q86VP3 889 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 TRIM58Q8NG06 486 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 NOX5Q96PH1 765 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 BRIP1Q9BX63 1249 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 CHORDC1Q9UHD1 332 aaPredicted RBP12.78□□□□□ -0.36
SEC23B-204ENST00000377475 LMO7Q8WWI1 1683 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 MST1RQ04912 1400 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 USP17L15C9J2P7 530 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 USP17L13C9JLJ4 530 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 USP17L11C9JVI0 530 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 USP17L18D6R9N7 530 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 USP17L22D6RA61 530 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 USP17L17D6RBQ6 530 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 USP17L19D6RCP7 530 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 USP17L20D6RJB6 530 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 CLIC2O15247 247 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 MCM3P25205 808 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 GNA11P29992 359 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 USP17L24Q0WX57 530 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 USP17L6PQ6QN14 398 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 LARP4BQ92615 738 aaKnown RBP12.78□□□□□ -0.36
SEC23B-204ENST00000377475 PYM1Q9BRP8 204 aaKnown RBP12.78□□□□□ -0.36
SEC23B-204ENST00000377475 SEMA6BQ9H3T3 888 aa12.78□□□□□ -0.36
SEC23B-204ENST00000377475 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.78□□□□□ -0.36
SEC23B-204ENST00000377475 MRC1P22897 1456 aa12.77□□□□□ -0.36
SEC23B-204ENST00000377475 ABCC6O95255 1503 aa12.77□□□□□ -0.36
SEC23B-204ENST00000377475 E7EVH7 732 aa12.77□□□□□ -0.36
SEC23B-204ENST00000377475 ERLIN2O94905 339 aa12.77□□□□□ -0.36
SEC23B-204ENST00000377475 UBXN2AP68543 259 aa12.77□□□□□ -0.36
SEC23B-204ENST00000377475 DPP8Q6V1X1 898 aaPredicted RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms