RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 PPP2R5BQ15173 497 aa17.17■□□□□ 0.34
FXN-201ENST00000377270 RNF187Q5TA31 235 aaPredicted RBP17.17■□□□□ 0.34
FXN-201ENST00000377270 MTHFD1LQ6UB35 978 aa17.17■□□□□ 0.34
FXN-201ENST00000377270 CATIPQ7Z7H3 387 aa17.17■□□□□ 0.34
FXN-201ENST00000377270 AMIGO3Q86WK7 504 aa17.17■□□□□ 0.34
FXN-201ENST00000377270 OXER1Q8TDS5 423 aa17.17■□□□□ 0.34
FXN-201ENST00000377270 NSMCE1Q8WV22 266 aa17.17■□□□□ 0.34
FXN-201ENST00000377270 RIN2Q8WYP3 895 aaPredicted RBP17.17■□□□□ 0.34
FXN-201ENST00000377270 TUBE1Q9UJT0 475 aa17.17■□□□□ 0.34
FXN-201ENST00000377270 JAG2Q9Y219 1238 aa17.17■□□□□ 0.34
FXN-201ENST00000377270 LINGO3P0C6S8 592 aa17.17■□□□□ 0.34
FXN-201ENST00000377270 PRDX5P30044 214 aa17.17■□□□□ 0.34
FXN-201ENST00000377270 AGAP3Q96P47 875 aa17.17■□□□□ 0.34
FXN-201ENST00000377270 TSC22D3Q99576 134 aa17.17■□□□□ 0.34
FXN-201ENST00000377270 CAPS2Q9BXY5 557 aa17.17■□□□□ 0.34
FXN-201ENST00000377270 RNF26Q9BY78 433 aaPredicted RBP17.17■□□□□ 0.34
FXN-201ENST00000377270 FANCLQ9NW38 375 aa17.17■□□□□ 0.34
FXN-201ENST00000377270 BAZ2AQ9UIF9 1905 aaKnown RBP17.17■□□□□ 0.34
FXN-201ENST00000377270 hCG_1642624A0A1W2PR95 340 aa17.17■□□□□ 0.34
FXN-201ENST00000377270 KIF5CO60282 957 aa17.17■□□□□ 0.34
FXN-201ENST00000377270 GNGT1P63211 74 aa17.17■□□□□ 0.34
FXN-201ENST00000377270 EVX2Q03828 476 aa17.17■□□□□ 0.34
FXN-201ENST00000377270 CDC37Q16543 378 aaPredicted RBP17.17■□□□□ 0.34
FXN-201ENST00000377270 TXNRD3Q86VQ6 643 aa17.17■□□□□ 0.34
FXN-201ENST00000377270 CABP5Q9NP86 173 aa17.17■□□□□ 0.34
FXN-201ENST00000377270 LZTFL1Q9NQ48 299 aa17.17■□□□□ 0.34
FXN-201ENST00000377270 PCDHB6Q9Y5E3 794 aa17.17■□□□□ 0.34
FXN-201ENST00000377270 CASZ1Q86V15 1759 aa17.16■□□□□ 0.34
FXN-201ENST00000377270 SPECC1LQ69YQ0 1117 aa17.16■□□□□ 0.34
FXN-201ENST00000377270 TAX1BP1Q86VP1 789 aa17.16■□□□□ 0.34
FXN-201ENST00000377270 CRNKL1Q9BZJ0 848 aaKnown RBP17.16■□□□□ 0.34
FXN-201ENST00000377270 MYH2Q9UKX2 1941 aa17.16■□□□□ 0.34
FXN-201ENST00000377270 NDUFAB1O14561 156 aa17.16■□□□□ 0.34
FXN-201ENST00000377270 FGRP09769 529 aa17.16■□□□□ 0.34
FXN-201ENST00000377270 TM4SF1P30408 202 aa17.16■□□□□ 0.34
FXN-201ENST00000377270 GRIN1Q05586 938 aa17.16■□□□□ 0.34
FXN-201ENST00000377270 KIF4BQ2VIQ3 1234 aa17.16■□□□□ 0.34
FXN-201ENST00000377270 SDCCAG8Q86SQ7 713 aaPredicted RBP17.16■□□□□ 0.34
FXN-201ENST00000377270 METTL16Q86W50 562 aaKnown RBP17.16■□□□□ 0.34
FXN-201ENST00000377270 SYCP3Q8IZU3 236 aa17.16■□□□□ 0.34
FXN-201ENST00000377270 CUL5Q93034 780 aa17.16■□□□□ 0.34
FXN-201ENST00000377270 VPS54Q9P1Q0 977 aa17.16■□□□□ 0.34
FXN-201ENST00000377270 V9GY48 417 aaPredicted RBP17.16■□□□□ 0.34
FXN-201ENST00000377270 SCN7AQ01118 1682 aa17.16■□□□□ 0.34
FXN-201ENST00000377270 CTAGE15A4D2H0 777 aa17.15■□□□□ 0.34
FXN-201ENST00000377270 PLEKHA8P1O95397 391 aa17.15■□□□□ 0.34
FXN-201ENST00000377270 CTAGE8P0CG41 777 aa17.15■□□□□ 0.34
FXN-201ENST00000377270 PCP11498 1178 aaKnown RBP17.15■□□□□ 0.34
FXN-201ENST00000377270 XBP1P17861 261 aa17.15■□□□□ 0.34
FXN-201ENST00000377270 PPFIA1Q13136 1202 aa17.15■□□□□ 0.34
FXN-201ENST00000377270 SF3B2Q13435 895 aaKnown RBP17.15■□□□□ 0.34
FXN-201ENST00000377270 CTAGE6Q86UF2 777 aa17.15■□□□□ 0.34
FXN-201ENST00000377270 SPATS2Q86XZ4 545 aaKnown RBP17.15■□□□□ 0.34
FXN-201ENST00000377270 CTAGE4Q8IX94 777 aa17.15■□□□□ 0.34
FXN-201ENST00000377270 FUKQ8N0W3 1084 aa17.15■□□□□ 0.34
FXN-201ENST00000377270 DCP1AQ9NPI6 582 aaPredicted RBP17.15■□□□□ 0.34
FXN-201ENST00000377270 SPATA7Q9P0W8 599 aa17.15■□□□□ 0.34
FXN-201ENST00000377270 FBXO2Q9UK22 296 aaPredicted RBP17.15■□□□□ 0.34
FXN-201ENST00000377270 UBAP1LF5GYI3 381 aa17.15■□□□□ 0.34
FXN-201ENST00000377270 CYP11B2P19099 503 aa17.15■□□□□ 0.34
FXN-201ENST00000377270 PTPREP23469 700 aa17.15■□□□□ 0.34
FXN-201ENST00000377270 PKN1Q16512 942 aa17.15■□□□□ 0.34
FXN-201ENST00000377270 WDR93Q6P2C0 686 aa17.15■□□□□ 0.34
FXN-201ENST00000377270 OLFM4Q6UX06 510 aa17.15■□□□□ 0.34
FXN-201ENST00000377270 UNC45AQ9H3U1 944 aa17.15■□□□□ 0.34
FXN-201ENST00000377270 MYO1AQ9UBC5 1043 aa17.15■□□□□ 0.34
FXN-201ENST00000377270 USP21Q9UK80 565 aa17.15■□□□□ 0.34
FXN-201ENST00000377270 DEUP1Q05D60 604 aa17.14■□□□□ 0.33
FXN-201ENST00000377270 TROAPQ12815 778 aa17.14■□□□□ 0.33
FXN-201ENST00000377270 FOXP4Q8IVH2 680 aaPredicted RBP17.14■□□□□ 0.33
FXN-201ENST00000377270 FNBP4Q8N3X1 1017 aaPredicted RBP17.14■□□□□ 0.33
FXN-201ENST00000377270 RASSF8Q8NHQ8 419 aa17.14■□□□□ 0.33
FXN-201ENST00000377270 CCDC47Q96A33 483 aaKnown RBP17.14■□□□□ 0.33
FXN-201ENST00000377270 SHISA4Q96DD7 197 aa17.14■□□□□ 0.33
FXN-201ENST00000377270 PDS5AQ29RF7 1337 aaKnown RBP17.14■□□□□ 0.33
FXN-201ENST00000377270 CTAGE9A4FU28 777 aa17.14■□□□□ 0.33
FXN-201ENST00000377270 FUT2Q10981 343 aa17.14■□□□□ 0.33
FXN-201ENST00000377270 MYO1EQ12965 1108 aa17.14■□□□□ 0.33
FXN-201ENST00000377270 MTF1Q14872 753 aa17.14■□□□□ 0.33
FXN-201ENST00000377270 MYBPC3Q14896 1274 aa17.14■□□□□ 0.33
FXN-201ENST00000377270 FAM47AQ5JRC9 791 aa17.14■□□□□ 0.33
FXN-201ENST00000377270 YTHDF3Q7Z739 585 aaKnown RBP17.14■□□□□ 0.33
FXN-201ENST00000377270 FAM114A1Q8IWE2 563 aa17.14■□□□□ 0.33
FXN-201ENST00000377270 ATP8A2Q9NTI2 1148 aa17.14■□□□□ 0.33
FXN-201ENST00000377270 PCDHA5Q9Y5H7 936 aa17.14■□□□□ 0.33
FXN-201ENST00000377270 DUOX1Q9NRD9 1551 aa17.14■□□□□ 0.33
FXN-201ENST00000377270 FOXN1O15353 648 aa17.13■□□□□ 0.33
FXN-201ENST00000377270 PRPF3O43395 683 aaKnown RBP17.13■□□□□ 0.33
FXN-201ENST00000377270 NMT2O60551 498 aa17.13■□□□□ 0.33
FXN-201ENST00000377270 CYP2D6P10635 497 aa17.13■□□□□ 0.33
FXN-201ENST00000377270 RFC4P35249 363 aa17.13■□□□□ 0.33
FXN-201ENST00000377270 CUL3Q13618 768 aa17.13■□□□□ 0.33
FXN-201ENST00000377270 WHAMMP3Q1A5X7 153 aa17.13■□□□□ 0.33
FXN-201ENST00000377270 ZNF569Q5MCW4 686 aa17.13■□□□□ 0.33
FXN-201ENST00000377270 MIPOL1Q8TD10 442 aa17.13■□□□□ 0.33
FXN-201ENST00000377270 CEP131Q9UPN4 1083 aa17.13■□□□□ 0.33
FXN-201ENST00000377270 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.13■□□□□ 0.33
FXN-201ENST00000377270 B4DLN1 442 aa17.13■□□□□ 0.33
FXN-201ENST00000377270 CALM1P0DP23 149 aa17.13■□□□□ 0.33
FXN-201ENST00000377270 CALM2P0DP24 149 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms