RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 SNX14Q9Y5W7 946 aa25.54■■□□□ 1.68
SRM-201ENST00000376957 ALPK3Q96L96 1907 aa25.54■■□□□ 1.68
SRM-201ENST00000376957 ELP1O95163 1332 aa25.54■■□□□ 1.68
SRM-201ENST00000376957 MROH7Q68CQ1 1323 aa25.54■■□□□ 1.68
SRM-201ENST00000376957 LCTP09848 1927 aa25.53■■□□□ 1.68
SRM-201ENST00000376957 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.53■■□□□ 1.68
SRM-201ENST00000376957 PPP1R11O60927 126 aaPredicted RBP25.53■■□□□ 1.68
SRM-201ENST00000376957 RCAN1P53805 252 aa25.53■■□□□ 1.68
SRM-201ENST00000376957 FSCN1Q16658 493 aaKnown RBP25.53■■□□□ 1.68
SRM-201ENST00000376957 COLQQ9Y215 455 aaPredicted RBP25.53■■□□□ 1.68
SRM-201ENST00000376957 RBM47A0AV96 593 aaKnown RBP25.52■■□□□ 1.68
SRM-201ENST00000376957 EIF3JO75822 258 aaKnown RBP25.52■■□□□ 1.68
SRM-201ENST00000376957 SYN1P17600 705 aa25.52■■□□□ 1.68
SRM-201ENST00000376957 CPT1AP50416 773 aa25.52■■□□□ 1.68
SRM-201ENST00000376957 SNX17Q15036 470 aa25.52■■□□□ 1.68
SRM-201ENST00000376957 RTN1Q16799 776 aa25.52■■□□□ 1.68
SRM-201ENST00000376957 SRBD1Q8N5C6 995 aaKnown RBP25.52■■□□□ 1.68
SRM-201ENST00000376957 TCEANC2Q96MN5 208 aa25.52■■□□□ 1.68
SRM-201ENST00000376957 SEZ6LQ9BYH1 1024 aa25.52■■□□□ 1.68
SRM-201ENST00000376957 PXMP2Q9NR77 195 aa25.52■■□□□ 1.68
SRM-201ENST00000376957 BAZ2BQ9UIF8 2168 aaKnown RBP25.51■■□□□ 1.67
SRM-201ENST00000376957 KLF18A0A0U1RQI7 1052 aa25.51■■□□□ 1.67
SRM-201ENST00000376957 DCDC2CA8MYV0 355 aa25.51■■□□□ 1.67
SRM-201ENST00000376957 ADCY6O43306 1168 aa25.51■■□□□ 1.67
SRM-201ENST00000376957 PLEKHA8P1O95397 391 aa25.51■■□□□ 1.67
SRM-201ENST00000376957 TXNP10599 105 aaKnown RBP25.51■■□□□ 1.67
SRM-201ENST00000376957 EIF2AK2P19525 551 aaKnown RBP25.51■■□□□ 1.67
SRM-201ENST00000376957 TRIM60Q495X7 471 aa25.51■■□□□ 1.67
SRM-201ENST00000376957 CCSAPQ6IQ19 270 aaPredicted RBP25.51■■□□□ 1.67
SRM-201ENST00000376957 TMTC3Q6ZXV5 915 aa25.51■■□□□ 1.67
SRM-201ENST00000376957 CCDC82Q8N4S0 544 aa25.51■■□□□ 1.67
SRM-201ENST00000376957 SMARCC2Q8TAQ2 1214 aa25.51■■□□□ 1.67
SRM-201ENST00000376957 DDX49Q9Y6V7 483 aaKnown RBP25.51■■□□□ 1.67
SRM-201ENST00000376957 NR3C2P08235 984 aa25.5■■□□□ 1.67
SRM-201ENST00000376957 CASTP20810 708 aaKnown RBP25.5■■□□□ 1.67
SRM-201ENST00000376957 KCNV1Q6PIU1 500 aa25.5■■□□□ 1.67
SRM-201ENST00000376957 Q6ZUG5 572 aa25.5■■□□□ 1.67
SRM-201ENST00000376957 POLR3EQ9NVU0 708 aa25.5■■□□□ 1.67
SRM-201ENST00000376957 COL20A1Q9P218 1284 aa25.5■■□□□ 1.67
SRM-201ENST00000376957 LRRC37A2A6NM11 1700 aa25.49■■□□□ 1.67
SRM-201ENST00000376957 A0A0U1RQG5 324 aaPredicted RBP25.49■■□□□ 1.67
SRM-201ENST00000376957 A0A1W2PPC1 479 aa25.49■■□□□ 1.67
SRM-201ENST00000376957 MYADML2A6NDP7 307 aa25.49■■□□□ 1.67
SRM-201ENST00000376957 GOLGA8AA7E2F4 631 aa25.49■■□□□ 1.67
SRM-201ENST00000376957 GOLGA8BA8MQT2 603 aa25.49■■□□□ 1.67
SRM-201ENST00000376957 RPS6KB1P23443 525 aa25.49■■□□□ 1.67
SRM-201ENST00000376957 HOXA13P31271 388 aaPredicted RBP25.49■■□□□ 1.67
SRM-201ENST00000376957 SLC35G1Q2M3R5 365 aa25.49■■□□□ 1.67
SRM-201ENST00000376957 HABP4Q5JVS0 413 aaKnown RBP25.49■■□□□ 1.67
SRM-201ENST00000376957 SEPT14Q6ZU15 432 aa25.49■■□□□ 1.67
SRM-201ENST00000376957 FCHSD1Q86WN1 690 aa25.49■■□□□ 1.67
SRM-201ENST00000376957 RAB11FIP4Q86YS3 637 aa25.49■■□□□ 1.67
SRM-201ENST00000376957 OR6J1Q8NGC5 347 aa25.49■■□□□ 1.67
SRM-201ENST00000376957 TOX2Q96NM4 488 aa25.49■■□□□ 1.67
SRM-201ENST00000376957 USP26Q9BXU7 913 aa25.49■■□□□ 1.67
SRM-201ENST00000376957 PRDM5Q9NQX1 630 aaPredicted RBP25.49■■□□□ 1.67
SRM-201ENST00000376957 OPLAHO14841 1288 aa25.48■■□□□ 1.67
SRM-201ENST00000376957 KPNA6O60684 536 aa25.48■■□□□ 1.67
SRM-201ENST00000376957 METAP2P50579 478 aaKnown RBP eCLIP25.48■■□□□ 1.679e-7■□□□□ 10.6
SRM-201ENST00000376957 BEX3Q00994 111 aa25.48■■□□□ 1.67
SRM-201ENST00000376957 COL9A3Q14050 684 aaPredicted RBP25.48■■□□□ 1.67
SRM-201ENST00000376957 CMTR1Q8N1G2 835 aaKnown RBP25.48■■□□□ 1.67
SRM-201ENST00000376957 FBXL16Q8N461 479 aa25.48■■□□□ 1.67
SRM-201ENST00000376957 BRPF3Q9ULD4 1205 aa25.48■■□□□ 1.67
SRM-201ENST00000376957 CYP46A1Q9Y6A2 500 aa25.48■■□□□ 1.67
SRM-201ENST00000376957 TLR3O15455 904 aaKnown RBP25.47■■□□□ 1.67
SRM-201ENST00000376957 PQBP1O60828 265 aaKnown RBP25.47■■□□□ 1.67
SRM-201ENST00000376957 MYCLP12524 364 aaPredicted RBP25.47■■□□□ 1.67
SRM-201ENST00000376957 CCND2P30279 289 aa25.47■■□□□ 1.67
SRM-201ENST00000376957 BMP8BP34820 402 aa25.47■■□□□ 1.67
SRM-201ENST00000376957 BRF1Q92994 677 aa25.47■■□□□ 1.67
SRM-201ENST00000376957 PSTPIP2Q9H939 334 aa25.47■■□□□ 1.67
SRM-201ENST00000376957 hCG_1984214I3L0E3 225 aa25.46■■□□□ 1.67
SRM-201ENST00000376957 STAM2O75886 525 aa25.46■■□□□ 1.67
SRM-201ENST00000376957 CLTBP09497 229 aa25.46■■□□□ 1.67
SRM-201ENST00000376957 TLE2Q04725 743 aa25.46■■□□□ 1.67
SRM-201ENST00000376957 RUFY3Q7L099 469 aa25.46■■□□□ 1.67
SRM-201ENST00000376957 ANKRD33Q7Z3H0 272 aa25.46■■□□□ 1.67
SRM-201ENST00000376957 TEX2Q8IWB9 1127 aa25.46■■□□□ 1.67
SRM-201ENST00000376957 ZNF713Q8N859 430 aaPredicted RBP25.46■■□□□ 1.67
SRM-201ENST00000376957 PDCD2LQ9BRP1 358 aa25.46■■□□□ 1.67
SRM-201ENST00000376957 RBM27Q9P2N5 1060 aaKnown RBP25.46■■□□□ 1.67
SRM-201ENST00000376957 MRVI1Q9Y6F6 885 aa25.46■■□□□ 1.67
SRM-201ENST00000376957 CEP290O15078 2479 aa25.46■■□□□ 1.67
SRM-201ENST00000376957 ARVCFO00192 962 aa25.45■■□□□ 1.66
SRM-201ENST00000376957 PIK3CDO00329 1044 aa25.45■■□□□ 1.66
SRM-201ENST00000376957 MAGEA10P43363 369 aaPredicted RBP25.45■■□□□ 1.66
SRM-201ENST00000376957 PGM5Q15124 567 aa25.45■■□□□ 1.66
SRM-201ENST00000376957 GNPTABQ3T906 1256 aa25.45■■□□□ 1.66
SRM-201ENST00000376957 CXCL17Q6UXB2 119 aa25.45■■□□□ 1.66
SRM-201ENST00000376957 HEATR3Q7Z4Q2 680 aa25.45■■□□□ 1.66
SRM-201ENST00000376957 GDF15Q99988 308 aa25.45■■□□□ 1.66
SRM-201ENST00000376957 TM6SF1Q9BZW5 370 aa25.45■■□□□ 1.66
SRM-201ENST00000376957 UBE2OQ9C0C9 1292 aaKnown RBP25.45■■□□□ 1.66
SRM-201ENST00000376957 CTAGE5O15320 804 aa25.44■■□□□ 1.66
SRM-201ENST00000376957 GH1P01241 217 aa25.44■■□□□ 1.66
SRM-201ENST00000376957 TGFB3P10600 412 aa25.44■■□□□ 1.66
SRM-201ENST00000376957 CPA1P15085 419 aa25.44■■□□□ 1.66
SRM-201ENST00000376957 AKAP17AQ02040 695 aaKnown RBP25.44■■□□□ 1.66
SRM-201ENST00000376957 APOBRQ0VD83 1088 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms