RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 ATP2B2Q01814 1243 aa14.71□□□□□ -0.05
ACTN1-202ENST00000376839 VWA3BQ502W6 1294 aa14.71□□□□□ -0.05
ACTN1-202ENST00000376839 TMED8Q6PL24 325 aaPredicted RBP14.71□□□□□ -0.05
ACTN1-202ENST00000376839 BBXQ8WY36 941 aaPredicted RBP14.71□□□□□ -0.05
ACTN1-202ENST00000376839 NYXQ9GZU5 481 aa14.71□□□□□ -0.05
ACTN1-202ENST00000376839 SH2D4AQ9H788 454 aa14.71□□□□□ -0.05
ACTN1-202ENST00000376839 SMARCAL1Q9NZC9 954 aa14.71□□□□□ -0.05
ACTN1-202ENST00000376839 EIF4A3P38919 411 aaKnown RBP14.71□□□□□ -0.05
ACTN1-202ENST00000376839 KIF11P52732 1056 aa14.71□□□□□ -0.05
ACTN1-202ENST00000376839 SLC20A2Q08357 652 aa14.71□□□□□ -0.05
ACTN1-202ENST00000376839 DYMQ7RTS9 669 aa14.71□□□□□ -0.05
ACTN1-202ENST00000376839 AMOTL1Q8IY63 956 aa14.71□□□□□ -0.05
ACTN1-202ENST00000376839 PIGSQ96S52 555 aa14.71□□□□□ -0.05
ACTN1-202ENST00000376839 PSMB7Q99436 277 aa14.71□□□□□ -0.05
ACTN1-202ENST00000376839 LZTS2Q9BRK4 669 aa14.71□□□□□ -0.05
ACTN1-202ENST00000376839 TSGA10Q9BZW7 698 aa14.71□□□□□ -0.05
ACTN1-202ENST00000376839 TSPYL1Q9H0U9 437 aa14.71□□□□□ -0.05
ACTN1-202ENST00000376839 NDST4Q9H3R1 872 aa14.71□□□□□ -0.05
ACTN1-202ENST00000376839 C6orf50Q9HD87 102 aa14.71□□□□□ -0.05
ACTN1-202ENST00000376839 HNRNPH3P31942 346 aaKnown RBP14.7□□□□□ -0.06
ACTN1-202ENST00000376839 AMPD3Q01432 767 aa14.7□□□□□ -0.06
ACTN1-202ENST00000376839 PTF1AQ7RTS3 328 aa14.7□□□□□ -0.06
ACTN1-202ENST00000376839 FNBP4Q8N3X1 1017 aaPredicted RBP14.7□□□□□ -0.06
ACTN1-202ENST00000376839 PNMA5Q96PV4 448 aa14.7□□□□□ -0.06
ACTN1-202ENST00000376839 EYA3Q99504 573 aa14.7□□□□□ -0.06
ACTN1-202ENST00000376839 TRIM34Q9BYJ4 488 aa14.7□□□□□ -0.06
ACTN1-202ENST00000376839 MMRN2Q9H8L6 949 aa14.7□□□□□ -0.06
ACTN1-202ENST00000376839 EHD2Q9NZN4 543 aa14.7□□□□□ -0.06
ACTN1-202ENST00000376839 JRKLQ9Y4A0 524 aa14.7□□□□□ -0.06
ACTN1-202ENST00000376839 NAV1Q8NEY1 1877 aa14.7□□□□□ -0.06
ACTN1-202ENST00000376839 CXCR5P32302 372 aa14.7□□□□□ -0.06
ACTN1-202ENST00000376839 COBLL1Q53SF7 1204 aa14.7□□□□□ -0.06
ACTN1-202ENST00000376839 NFRKBQ6P4R8 1299 aa14.7□□□□□ -0.06
ACTN1-202ENST00000376839 GLIS3Q8NEA6 775 aa14.7□□□□□ -0.06
ACTN1-202ENST00000376839 TRIM58Q8NG06 486 aa14.7□□□□□ -0.06
ACTN1-202ENST00000376839 WDR66Q8TBY9 1149 aa14.7□□□□□ -0.06
ACTN1-202ENST00000376839 CALML4Q96GE6 196 aa14.7□□□□□ -0.06
ACTN1-202ENST00000376839 CRACR2AQ9BSW2 395 aa14.7□□□□□ -0.06
ACTN1-202ENST00000376839 LRRC1Q9BTT6 524 aa14.7□□□□□ -0.06
ACTN1-202ENST00000376839 UBA5Q9GZZ9 404 aa14.7□□□□□ -0.06
ACTN1-202ENST00000376839 ANKIB1Q9P2G1 1089 aa14.7□□□□□ -0.06
ACTN1-202ENST00000376839 DMGDHQ9UI17 866 aaKnown RBP14.7□□□□□ -0.06
ACTN1-202ENST00000376839 MYH10P35580 1976 aa14.7□□□□□ -0.06
ACTN1-202ENST00000376839 BAG3O95817 575 aa14.7□□□□□ -0.06
ACTN1-202ENST00000376839 GNA11P29992 359 aa14.7□□□□□ -0.06
ACTN1-202ENST00000376839 PPP1R2P41236 205 aa14.7□□□□□ -0.06
ACTN1-202ENST00000376839 CDK8P49336 464 aa14.7□□□□□ -0.06
ACTN1-202ENST00000376839 SV2BQ7L1I2 683 aa14.7□□□□□ -0.06
ACTN1-202ENST00000376839 RRP36Q96EU6 259 aaKnown RBP14.7□□□□□ -0.06
ACTN1-202ENST00000376839 RASSF4Q9H2L5 321 aa14.7□□□□□ -0.06
ACTN1-202ENST00000376839 PODXL2Q9NZ53 605 aa14.7□□□□□ -0.06
ACTN1-202ENST00000376839 SALL4Q9UJQ4 1053 aa14.7□□□□□ -0.06
ACTN1-202ENST00000376839 NRAPQ86VF7 1730 aa14.69□□□□□ -0.06
ACTN1-202ENST00000376839 LRRC53A6NM62 1247 aa14.69□□□□□ -0.06
ACTN1-202ENST00000376839 SLC37A4O43826 429 aa14.69□□□□□ -0.06
ACTN1-202ENST00000376839 USO1O60763 962 aaKnown RBP14.69□□□□□ -0.06
ACTN1-202ENST00000376839 TACC1O75410 805 aa14.69□□□□□ -0.06
ACTN1-202ENST00000376839 PPP4CP60510 307 aa14.69□□□□□ -0.06
ACTN1-202ENST00000376839 NFIXQ14938 502 aa14.69□□□□□ -0.06
ACTN1-202ENST00000376839 SOGA3Q5TF21 947 aa14.69□□□□□ -0.06
ACTN1-202ENST00000376839 RRAGAQ7L523 313 aa14.69□□□□□ -0.06
ACTN1-202ENST00000376839 REXO1Q8N1G1 1221 aaKnown RBP14.69□□□□□ -0.06
ACTN1-202ENST00000376839 CCDC155Q8N6L0 562 aa14.69□□□□□ -0.06
ACTN1-202ENST00000376839 ANKRD13CQ8N6S4 541 aa14.69□□□□□ -0.06
ACTN1-202ENST00000376839 GOLGA6L1Q8N7Z2 621 aa14.69□□□□□ -0.06
ACTN1-202ENST00000376839 AENQ8WTP8 325 aaKnown RBP14.69□□□□□ -0.06
ACTN1-202ENST00000376839 RTFDC1Q9BY42 306 aaPredicted RBP14.69□□□□□ -0.06
ACTN1-202ENST00000376839 DEF6Q9H4E7 631 aa14.69□□□□□ -0.06
ACTN1-202ENST00000376839 NARFQ9UHQ1 456 aa14.69□□□□□ -0.06
ACTN1-202ENST00000376839 SBF2Q86WG5 1849 aa14.69□□□□□ -0.06
ACTN1-202ENST00000376839 VGLL3A8MV65 326 aa14.69□□□□□ -0.06
ACTN1-202ENST00000376839 NCK2O43639 380 aa14.69□□□□□ -0.06
ACTN1-202ENST00000376839 EDIL3O43854 480 aa14.69□□□□□ -0.06
ACTN1-202ENST00000376839 MATR3P43243 847 aaKnown RBP eCLIP14.69□□□□□ -0.062e-6■■■■□ 22.4
ACTN1-202ENST00000376839 NT5C2P49902 561 aa14.69□□□□□ -0.06
ACTN1-202ENST00000376839 UNC13DQ70J99 1090 aa14.69□□□□□ -0.06
ACTN1-202ENST00000376839 AMIGO3Q86WK7 504 aa14.69□□□□□ -0.06
ACTN1-202ENST00000376839 MMGT1Q8N4V1 131 aa14.69□□□□□ -0.06
ACTN1-202ENST00000376839 CEP95Q96GE4 821 aa14.69□□□□□ -0.06
ACTN1-202ENST00000376839 MTMR9Q96QG7 549 aa14.69□□□□□ -0.06
ACTN1-202ENST00000376839 NUDT12Q9BQG2 462 aa14.69□□□□□ -0.06
ACTN1-202ENST00000376839 SEC63Q9UGP8 760 aaKnown RBP14.69□□□□□ -0.06
ACTN1-202ENST00000376839 RSPH14Q9UHP6 348 aa14.69□□□□□ -0.06
ACTN1-202ENST00000376839 SPATA31A5Q5VU36 1347 aa14.68□□□□□ -0.06
ACTN1-202ENST00000376839 SPATA31A7Q8IWB4 1347 aa14.68□□□□□ -0.06
ACTN1-202ENST00000376839 CNTNAP4Q9C0A0 1308 aa14.68□□□□□ -0.06
ACTN1-202ENST00000376839 POTEMA6NI47 508 aa14.68□□□□□ -0.06
ACTN1-202ENST00000376839 AKR1B10O60218 316 aa14.68□□□□□ -0.06
ACTN1-202ENST00000376839 TDP2O95551 362 aa14.68□□□□□ -0.06
ACTN1-202ENST00000376839 SLC7A5Q01650 507 aa14.68□□□□□ -0.06
ACTN1-202ENST00000376839 MAPK8IP2Q13387 824 aaPredicted RBP14.68□□□□□ -0.06
ACTN1-202ENST00000376839 LRRC41Q15345 812 aa14.68□□□□□ -0.06
ACTN1-202ENST00000376839 MAN2A1Q16706 1144 aa14.68□□□□□ -0.06
ACTN1-202ENST00000376839 IQCEQ6IPM2 695 aa14.68□□□□□ -0.06
ACTN1-202ENST00000376839 SPATA4Q8NEY3 305 aa14.68□□□□□ -0.06
ACTN1-202ENST00000376839 BAP1Q92560 729 aa14.68□□□□□ -0.06
ACTN1-202ENST00000376839 OSBPL9Q96SU4 736 aa14.68□□□□□ -0.06
ACTN1-202ENST00000376839 USP17L5A8MUK1 530 aa14.68□□□□□ -0.06
ACTN1-202ENST00000376839 ANKRD65E5RJM6 399 aa14.68□□□□□ -0.06
ACTN1-202ENST00000376839 CALCRLQ16602 461 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms