RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 NKX2-4Q9H2Z4 354 aa27.16■■□□□ 1.94
C9orf47-202ENST00000375850 KAT14Q9H8E8 782 aa27.16■■□□□ 1.94
C9orf47-202ENST00000375850 DIAPH3Q9NSV4 1193 aa27.16■■□□□ 1.94
C9orf47-202ENST00000375850 NBPF20Q3BBV1 942 aa27.15■■□□□ 1.94
C9orf47-202ENST00000375850 FAM47CQ5HY64 1035 aa27.15■■□□□ 1.94
C9orf47-202ENST00000375850 ZBBXA8MT70 800 aa27.14■■□□□ 1.94
C9orf47-202ENST00000375850 CYP2C9P11712 490 aa27.14■■□□□ 1.94
C9orf47-202ENST00000375850 ATP2A2P16615 1042 aaKnown RBP27.14■■□□□ 1.94
C9orf47-202ENST00000375850 CDC37Q16543 378 aaPredicted RBP27.14■■□□□ 1.94
C9orf47-202ENST00000375850 USH1GQ495M9 461 aa27.14■■□□□ 1.94
C9orf47-202ENST00000375850 PLEKHM2Q8IWE5 1019 aa27.14■■□□□ 1.94
C9orf47-202ENST00000375850 RETREG2Q8NC44 543 aa27.14■■□□□ 1.94
C9orf47-202ENST00000375850 NSUN6Q8TEA1 469 aaKnown RBP27.14■■□□□ 1.94
C9orf47-202ENST00000375850 SCLYQ96I15 445 aa27.14■■□□□ 1.94
C9orf47-202ENST00000375850 IWS1Q96ST2 819 aa27.14■■□□□ 1.94
C9orf47-202ENST00000375850 DSCC1Q9BVC3 393 aa27.14■■□□□ 1.94
C9orf47-202ENST00000375850 CTNNA3Q9UI47 895 aa27.14■■□□□ 1.94
C9orf47-202ENST00000375850 YBX2Q9Y2T7 364 aaKnown RBP27.14■■□□□ 1.94
C9orf47-202ENST00000375850 KDM4AO75164 1064 aa27.13■■□□□ 1.93
C9orf47-202ENST00000375850 GOLGA8HP0CJ92 632 aa27.13■■□□□ 1.93
C9orf47-202ENST00000375850 NUCB1Q02818 461 aa27.13■■□□□ 1.93
C9orf47-202ENST00000375850 BFSP2Q13515 415 aa27.13■■□□□ 1.93
C9orf47-202ENST00000375850 ZSCAN10Q96SZ4 725 aaPredicted RBP27.13■■□□□ 1.93
C9orf47-202ENST00000375850 ZKSCAN3Q9BRR0 538 aa27.13■■□□□ 1.93
C9orf47-202ENST00000375850 THEGQ9P2T0 379 aa27.13■■□□□ 1.93
C9orf47-202ENST00000375850 VCANP13611 3396 aa27.12■■□□□ 1.93
C9orf47-202ENST00000375850 IMMTQ16891 758 aaKnown RBP27.12■■□□□ 1.93
C9orf47-202ENST00000375850 PPP2R2DQ66LE6 453 aa27.12■■□□□ 1.93
C9orf47-202ENST00000375850 CWC27Q6UX04 472 aaKnown RBP27.12■■□□□ 1.93
C9orf47-202ENST00000375850 PHOSPHO2Q8TCD6 241 aa27.12■■□□□ 1.93
C9orf47-202ENST00000375850 KRT23Q9C075 422 aa27.12■■□□□ 1.93
C9orf47-202ENST00000375850 UBA5Q9GZZ9 404 aa27.12■■□□□ 1.93
C9orf47-202ENST00000375850 CNNM2Q9H8M5 875 aa27.12■■□□□ 1.93
C9orf47-202ENST00000375850 MRPL11Q9Y3B7 192 aaKnown RBP27.12■■□□□ 1.93
C9orf47-202ENST00000375850 B4GALNT3Q6L9W6 998 aa27.11■■□□□ 1.93
C9orf47-202ENST00000375850 CCDC62Q6P9F0 684 aa27.11■■□□□ 1.93
C9orf47-202ENST00000375850 CCDC155Q8N6L0 562 aa27.11■■□□□ 1.93
C9orf47-202ENST00000375850 VWCEQ96DN2 955 aa27.11■■□□□ 1.93
C9orf47-202ENST00000375850 SLC9A7Q96T83 725 aa27.11■■□□□ 1.93
C9orf47-202ENST00000375850 TSPYL2Q9H2G4 693 aaPredicted RBP27.11■■□□□ 1.93
C9orf47-202ENST00000375850 NOD1Q9Y239 953 aa27.11■■□□□ 1.93
C9orf47-202ENST00000375850 GH1P01241 217 aa27.1■■□□□ 1.93
C9orf47-202ENST00000375850 IGFBP4P22692 258 aa27.1■■□□□ 1.93
C9orf47-202ENST00000375850 ADGRE1Q14246 886 aa27.1■■□□□ 1.93
C9orf47-202ENST00000375850 STXBP2Q15833 593 aa27.1■■□□□ 1.93
C9orf47-202ENST00000375850 ADGRF4Q8IZF3 695 aa27.1■■□□□ 1.93
C9orf47-202ENST00000375850 SYTL5Q8TDW5 730 aaPredicted RBP27.1■■□□□ 1.93
C9orf47-202ENST00000375850 PRDM6Q9NQX0 595 aa27.1■■□□□ 1.93
C9orf47-202ENST00000375850 SCN10AQ9Y5Y9 1956 aa27.09■■□□□ 1.93
C9orf47-202ENST00000375850 PARP1P09874 1014 aaKnown RBP27.09■■□□□ 1.93
C9orf47-202ENST00000375850 IQCF3P0C7M6 154 aa27.09■■□□□ 1.93
C9orf47-202ENST00000375850 TMEM67Q5HYA8 995 aa27.09■■□□□ 1.93
C9orf47-202ENST00000375850 DEFB128Q7Z7B8 93 aa27.09■■□□□ 1.93
C9orf47-202ENST00000375850 SESTD1Q86VW0 696 aa27.09■■□□□ 1.93
C9orf47-202ENST00000375850 FBXO11Q86XK2 927 aa27.09■■□□□ 1.93
C9orf47-202ENST00000375850 CAGE1Q8TC20 777 aa27.09■■□□□ 1.93
C9orf47-202ENST00000375850 PPM1EQ8WY54 764 aa27.09■■□□□ 1.93
C9orf47-202ENST00000375850 COPS5Q92905 334 aa27.09■■□□□ 1.93
C9orf47-202ENST00000375850 UBAC1Q9BSL1 405 aa27.09■■□□□ 1.93
C9orf47-202ENST00000375850 B4E1Z4 1266 aa27.08■■□□□ 1.93
C9orf47-202ENST00000375850 ENAHQ8N8S7 591 aaPredicted RBP27.08■■□□□ 1.93
C9orf47-202ENST00000375850 ASB2Q96Q27 587 aa27.08■■□□□ 1.93
C9orf47-202ENST00000375850 RMDN3Q96TC7 470 aa27.08■■□□□ 1.93
C9orf47-202ENST00000375850 ZSWIM5Q9P217 1185 aa27.08■■□□□ 1.93
C9orf47-202ENST00000375850 TTC28Q96AY4 2481 aa27.07■■□□□ 1.92
C9orf47-202ENST00000375850 DHX16O60231 1041 aaKnown RBP27.07■■□□□ 1.92
C9orf47-202ENST00000375850 BAIAP3O94812 1187 aa27.07■■□□□ 1.92
C9orf47-202ENST00000375850 ARIH2O95376 493 aa27.07■■□□□ 1.92
C9orf47-202ENST00000375850 PARNO95453 639 aaKnown RBP27.07■■□□□ 1.92
C9orf47-202ENST00000375850 CASTP20810 708 aaKnown RBP27.07■■□□□ 1.92
C9orf47-202ENST00000375850 RABGGTBP53611 331 aa27.07■■□□□ 1.92
C9orf47-202ENST00000375850 MRPS5P82675 430 aaKnown RBP27.07■■□□□ 1.92
C9orf47-202ENST00000375850 QRICH1Q2TAL8 776 aa27.07■■□□□ 1.92
C9orf47-202ENST00000375850 TAAR1Q96RJ0 339 aa27.07■■□□□ 1.92
C9orf47-202ENST00000375850 CPVLQ9H3G5 476 aa27.07■■□□□ 1.92
C9orf47-202ENST00000375850 MAP3K20Q9NYL2 800 aaKnown RBP27.07■■□□□ 1.92
C9orf47-202ENST00000375850 TNFRSF10AO00220 468 aa27.06■■□□□ 1.92
C9orf47-202ENST00000375850 MMP3P08254 477 aa27.06■■□□□ 1.92
C9orf47-202ENST00000375850 SEPT14Q6ZU15 432 aa27.06■■□□□ 1.92
C9orf47-202ENST00000375850 SAMD3Q8N6K7 520 aa27.06■■□□□ 1.92
C9orf47-202ENST00000375850 AFAP1L1Q8TED9 768 aa27.06■■□□□ 1.92
C9orf47-202ENST00000375850 AFG1LQ8WV93 481 aa27.06■■□□□ 1.92
C9orf47-202ENST00000375850 EMID1Q96A84 441 aaPredicted RBP27.06■■□□□ 1.92
C9orf47-202ENST00000375850 CHD9Q3L8U1 2897 aa27.06■■□□□ 1.92
C9orf47-202ENST00000375850 KIF28PB7ZC32 967 aa27.05■■□□□ 1.92
C9orf47-202ENST00000375850 EIF3JO75822 258 aaKnown RBP27.05■■□□□ 1.92
C9orf47-202ENST00000375850 ARHGAP1Q07960 439 aa27.05■■□□□ 1.92
C9orf47-202ENST00000375850 TRAF1Q13077 416 aa27.05■■□□□ 1.92
C9orf47-202ENST00000375850 PTGISQ16647 500 aa27.05■■□□□ 1.92
C9orf47-202ENST00000375850 ARHGEF16Q5VV41 709 aa27.05■■□□□ 1.92
C9orf47-202ENST00000375850 KATNAL1Q9BW62 490 aa27.05■■□□□ 1.92
C9orf47-202ENST00000375850 AMNQ9BXJ7 453 aa27.05■■□□□ 1.92
C9orf47-202ENST00000375850 FTOQ9C0B1 505 aaKnown RBP eCLIP27.05■■□□□ 1.92
C9orf47-202ENST00000375850 JMJD4Q9H9V9 463 aa27.05■■□□□ 1.92
C9orf47-202ENST00000375850 LAMA4Q16363 1823 aa27.04■■□□□ 1.92
C9orf47-202ENST00000375850 POU3F3P20264 500 aaPredicted RBP27.04■■□□□ 1.92
C9orf47-202ENST00000375850 GHRHRQ02643 423 aa27.04■■□□□ 1.92
C9orf47-202ENST00000375850 DGKDQ16760 1214 aa27.04■■□□□ 1.92
C9orf47-202ENST00000375850 IFIT1BQ5T764 474 aaKnown RBP27.04■■□□□ 1.92
C9orf47-202ENST00000375850 IL27Q8NEV9 243 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 266.8 ms