RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 NDST4Q9H3R1 872 aa12.69□□□□□ -0.38
PTPN20-204ENST00000374346 SLC39A2Q9NP94 309 aa12.69□□□□□ -0.38
PTPN20-204ENST00000374346 RNF216Q9NWF9 866 aaPredicted RBP12.69□□□□□ -0.38
PTPN20-204ENST00000374346 AKR1B10O60218 316 aa12.68□□□□□ -0.38
PTPN20-204ENST00000374346 RPS6KA5O75582 802 aa12.68□□□□□ -0.38
PTPN20-204ENST00000374346 TM4SF1P30408 202 aa12.68□□□□□ -0.38
PTPN20-204ENST00000374346 BTDP43251 543 aa12.68□□□□□ -0.38
PTPN20-204ENST00000374346 KLK7P49862 253 aa12.68□□□□□ -0.38
PTPN20-204ENST00000374346 FXR2P51116 673 aaKnown RBP eCLIP12.68□□□□□ -0.38
PTPN20-204ENST00000374346 IRX5P78411 483 aaPredicted RBP12.68□□□□□ -0.38
PTPN20-204ENST00000374346 ITIH3Q06033 890 aa12.68□□□□□ -0.38
PTPN20-204ENST00000374346 PSMD2Q13200 908 aa12.68□□□□□ -0.38
PTPN20-204ENST00000374346 C2CD5Q86YS7 1000 aa12.68□□□□□ -0.38
PTPN20-204ENST00000374346 GUF1Q8N442 669 aaKnown RBP12.68□□□□□ -0.38
PTPN20-204ENST00000374346 KIAA0895Q8NCT3 520 aa12.68□□□□□ -0.38
PTPN20-204ENST00000374346 SRP68Q9UHB9 627 aaKnown RBP12.68□□□□□ -0.38
PTPN20-204ENST00000374346 RASSF10A6NK89 507 aa12.68□□□□□ -0.38
PTPN20-204ENST00000374346 PHACTR2O75167 634 aa12.68□□□□□ -0.38
PTPN20-204ENST00000374346 CYP27A1Q02318 531 aa12.68□□□□□ -0.38
PTPN20-204ENST00000374346 PDIA5Q14554 519 aa12.68□□□□□ -0.38
PTPN20-204ENST00000374346 KRT79Q5XKE5 535 aa12.68□□□□□ -0.38
PTPN20-204ENST00000374346 USP17L2Q6R6M4 530 aa12.68□□□□□ -0.38
PTPN20-204ENST00000374346 ARHGAP27Q6ZUM4 889 aa12.68□□□□□ -0.38
PTPN20-204ENST00000374346 TEX11Q8IYF3 940 aa12.68□□□□□ -0.38
PTPN20-204ENST00000374346 AFAP1L1Q8TED9 768 aa12.68□□□□□ -0.38
PTPN20-204ENST00000374346 LRRC15Q8TF66 581 aa12.68□□□□□ -0.38
PTPN20-204ENST00000374346 RTFDC1Q9BY42 306 aaPredicted RBP12.68□□□□□ -0.38
PTPN20-204ENST00000374346 FAM204AQ9H8W3 233 aa12.68□□□□□ -0.38
PTPN20-204ENST00000374346 VAT1LQ9HCJ6 419 aa12.68□□□□□ -0.38
PTPN20-204ENST00000374346 LUC7LQ9NQ29 371 aaKnown RBP12.68□□□□□ -0.38
PTPN20-204ENST00000374346 BIN2Q9UBW5 565 aaPredicted RBP12.68□□□□□ -0.38
PTPN20-204ENST00000374346 SNX12Q9UMY4 172 aa12.68□□□□□ -0.38
PTPN20-204ENST00000374346 TFR2Q9UP52 801 aa12.68□□□□□ -0.38
PTPN20-204ENST00000374346 PCDHA13Q9Y5I0 950 aa12.68□□□□□ -0.38
PTPN20-204ENST00000374346 SBF2Q86WG5 1849 aa12.68□□□□□ -0.38
PTPN20-204ENST00000374346 RNF40O75150 1001 aa12.67□□□□□ -0.38
PTPN20-204ENST00000374346 TCP1P17987 556 aaKnown RBP12.67□□□□□ -0.38
PTPN20-204ENST00000374346 KIF11P52732 1056 aa12.67□□□□□ -0.38
PTPN20-204ENST00000374346 FOXR2Q6PJQ5 311 aa12.67□□□□□ -0.38
PTPN20-204ENST00000374346 POTEDQ86YR6 584 aa12.67□□□□□ -0.38
PTPN20-204ENST00000374346 PIGSQ96S52 555 aa12.67□□□□□ -0.38
PTPN20-204ENST00000374346 EDEM3Q9BZQ6 932 aa12.67□□□□□ -0.38
PTPN20-204ENST00000374346 NUCKS1Q9H1E3 243 aaKnown RBP12.67□□□□□ -0.38
PTPN20-204ENST00000374346 SEMA6BQ9H3T3 888 aa12.67□□□□□ -0.38
PTPN20-204ENST00000374346 SH2D4AQ9H788 454 aa12.67□□□□□ -0.38
PTPN20-204ENST00000374346 MMRN2Q9H8L6 949 aa12.67□□□□□ -0.38
PTPN20-204ENST00000374346 RIC8AQ9NPQ8 531 aa12.67□□□□□ -0.38
PTPN20-204ENST00000374346 HPCAL4Q9UM19 191 aa12.67□□□□□ -0.38
PTPN20-204ENST00000374346 CDK5RAP2Q96SN8 1893 aa12.67□□□□□ -0.38
PTPN20-204ENST00000374346 GPR75-ASB3A0A0A6YYF3 556 aa12.67□□□□□ -0.38
PTPN20-204ENST00000374346 RCCD1A6NED2 376 aa12.67□□□□□ -0.38
PTPN20-204ENST00000374346 ADCY7P51828 1080 aa12.67□□□□□ -0.38
PTPN20-204ENST00000374346 KCNQ4P56696 695 aa12.67□□□□□ -0.38
PTPN20-204ENST00000374346 CCDC181Q5TID7 509 aa12.67□□□□□ -0.38
PTPN20-204ENST00000374346 C15orf52Q6ZUT6 534 aaKnown RBP12.67□□□□□ -0.38
PTPN20-204ENST00000374346 CACNA2D4Q7Z3S7 1137 aa12.67□□□□□ -0.38
PTPN20-204ENST00000374346 PROM2Q8N271 834 aa12.67□□□□□ -0.38
PTPN20-204ENST00000374346 CCDC24Q8N4L8 307 aa12.67□□□□□ -0.38
PTPN20-204ENST00000374346 MMTAG2Q9BU76 263 aaKnown RBP12.67□□□□□ -0.38
PTPN20-204ENST00000374346 FAM207AQ9NSI2 230 aaPredicted RBP12.67□□□□□ -0.38
PTPN20-204ENST00000374346 LCA5LO95447 670 aa12.66□□□□□ -0.38
PTPN20-204ENST00000374346 PAFAH1B1P43034 410 aa12.66□□□□□ -0.38
PTPN20-204ENST00000374346 SEPT2Q15019 361 aa12.66□□□□□ -0.38
PTPN20-204ENST00000374346 CCNI2Q6ZMN8 369 aaPredicted RBP12.66□□□□□ -0.38
PTPN20-204ENST00000374346 CCDC155Q8N6L0 562 aa12.66□□□□□ -0.38
PTPN20-204ENST00000374346 CEP95Q96GE4 821 aa12.66□□□□□ -0.38
PTPN20-204ENST00000374346 MTMR9Q96QG7 549 aa12.66□□□□□ -0.38
PTPN20-204ENST00000374346 RIOX1Q9H6W3 641 aa12.66□□□□□ -0.38
PTPN20-204ENST00000374346 FAM184BQ9ULE4 1060 aa12.66□□□□□ -0.38
PTPN20-204ENST00000374346 ASPRV1Q53RT3 343 aa12.66□□□□□ -0.38
PTPN20-204ENST00000374346 MMGT1Q8N4V1 131 aa12.66□□□□□ -0.38
PTPN20-204ENST00000374346 SELENOOQ9BVL4 669 aa12.66□□□□□ -0.38
PTPN20-204ENST00000374346 CPVLQ9H3G5 476 aa12.66□□□□□ -0.38
PTPN20-204ENST00000374346 BMP2KQ9NSY1 1161 aaPredicted RBP12.66□□□□□ -0.38
PTPN20-204ENST00000374346 TSKSQ9UJT2 592 aa12.66□□□□□ -0.38
PTPN20-204ENST00000374346 SIK3Q9Y2K2 1263 aa12.66□□□□□ -0.38
PTPN20-204ENST00000374346 HYOU1Q9Y4L1 999 aa12.66□□□□□ -0.38
PTPN20-204ENST00000374346 DUSP10Q9Y6W6 482 aa12.66□□□□□ -0.38
PTPN20-204ENST00000374346 MYH10P35580 1976 aa12.65□□□□□ -0.38
PTPN20-204ENST00000374346 SNED1Q8TER0 1413 aa12.65□□□□□ -0.38
PTPN20-204ENST00000374346 MYMKA6NI61 221 aa12.65□□□□□ -0.38
PTPN20-204ENST00000374346 ZNF185O15231 689 aa12.65□□□□□ -0.38
PTPN20-204ENST00000374346 SLC20A2Q08357 652 aa12.65□□□□□ -0.38
PTPN20-204ENST00000374346 GRB10Q13322 594 aa12.65□□□□□ -0.38
PTPN20-204ENST00000374346 RRAGAQ7L523 313 aa12.65□□□□□ -0.38
PTPN20-204ENST00000374346 DYMQ7RTS9 669 aa12.65□□□□□ -0.38
PTPN20-204ENST00000374346 ZNF572Q7Z3I7 529 aaPredicted RBP12.65□□□□□ -0.38
PTPN20-204ENST00000374346 SNX29Q8TEQ0 813 aa12.65□□□□□ -0.38
PTPN20-204ENST00000374346 RAD54LQ92698 747 aa12.65□□□□□ -0.38
PTPN20-204ENST00000374346 TANGO6Q9C0B7 1094 aa12.65□□□□□ -0.38
PTPN20-204ENST00000374346 BLOC1S4Q9NUP1 217 aa12.65□□□□□ -0.38
PTPN20-204ENST00000374346 ARHGAP20Q9P2F6 1191 aa12.65□□□□□ -0.38
PTPN20-204ENST00000374346 DDX60LQ5H9U9 1706 aaKnown RBP12.65□□□□□ -0.38
PTPN20-204ENST00000374346 GOLGA6BA6NDN3 693 aa12.65□□□□□ -0.38
PTPN20-204ENST00000374346 MARCH6O60337 910 aa12.65□□□□□ -0.38
PTPN20-204ENST00000374346 SYF2O95926 243 aaKnown RBP12.65□□□□□ -0.38
PTPN20-204ENST00000374346 RFC4P35249 363 aa12.65□□□□□ -0.38
PTPN20-204ENST00000374346 EIF4A3P38919 411 aaKnown RBP12.65□□□□□ -0.38
PTPN20-204ENST00000374346 PPP1R18Q6NYC8 613 aa12.65□□□□□ -0.38
PTPN20-204ENST00000374346 RNF10Q8N5U6 811 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms