RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 REXO1Q8N1G1 1221 aaKnown RBP13.36□□□□□ -0.27
NCDN-202ENST00000373243 RPGRQ92834 1020 aaKnown RBP13.36□□□□□ -0.27
NCDN-202ENST00000373243 NUP58Q9BVL2 599 aa13.36□□□□□ -0.27
NCDN-202ENST00000373243 GNPATO15228 680 aa13.35□□□□□ -0.27
NCDN-202ENST00000373243 CEP104O60308 925 aa13.35□□□□□ -0.27
NCDN-202ENST00000373243 DDAH1O94760 285 aa13.35□□□□□ -0.27
NCDN-202ENST00000373243 ADAT2Q7Z6V5 191 aaKnown RBP13.35□□□□□ -0.27
NCDN-202ENST00000373243 MICAL1Q8TDZ2 1067 aa13.35□□□□□ -0.27
NCDN-202ENST00000373243 NOX5Q96PH1 765 aa13.35□□□□□ -0.27
NCDN-202ENST00000373243 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.35□□□□□ -0.276e-7■■■■■ 121.8
NCDN-202ENST00000373243 XDHP47989 1333 aa13.35□□□□□ -0.27
NCDN-202ENST00000373243 POLR2FP61218 127 aaKnown RBP13.35□□□□□ -0.27
NCDN-202ENST00000373243 PLS1Q14651 629 aa13.35□□□□□ -0.27
NCDN-202ENST00000373243 TPTE2Q6XPS3 522 aa13.35□□□□□ -0.27
NCDN-202ENST00000373243 COA7Q96BR5 231 aa13.35□□□□□ -0.27
NCDN-202ENST00000373243 PHF20Q9BVI0 1012 aa13.35□□□□□ -0.27
NCDN-202ENST00000373243 PCDHA4Q9UN74 947 aa13.35□□□□□ -0.27
NCDN-202ENST00000373243 GOLGA6L7A0A1B0GV03 622 aa13.35□□□□□ -0.27
NCDN-202ENST00000373243 RPS6KA5O75582 802 aa13.35□□□□□ -0.27
NCDN-202ENST00000373243 ATP2C1P98194 919 aaPredicted RBP13.35□□□□□ -0.27
NCDN-202ENST00000373243 KIFC2Q96AC6 838 aa13.35□□□□□ -0.27
NCDN-202ENST00000373243 EYA3Q99504 573 aa13.35□□□□□ -0.27
NCDN-202ENST00000373243 TMEM60Q9H2L4 133 aa13.35□□□□□ -0.27
NCDN-202ENST00000373243 ANKZF1Q9H8Y5 726 aa13.35□□□□□ -0.27
NCDN-202ENST00000373243 EHD2Q9NZN4 543 aa13.35□□□□□ -0.27
NCDN-202ENST00000373243 TTC36A6NLP5 189 aa13.34□□□□□ -0.27
NCDN-202ENST00000373243 LGALS16A8MUM7 142 aa13.34□□□□□ -0.27
NCDN-202ENST00000373243 TXNRD1Q16881 649 aa13.34□□□□□ -0.27
NCDN-202ENST00000373243 NFRKBQ6P4R8 1299 aa13.34□□□□□ -0.27
NCDN-202ENST00000373243 TMC4Q7Z404 712 aa13.34□□□□□ -0.27
NCDN-202ENST00000373243 TRIM58Q8NG06 486 aa13.34□□□□□ -0.27
NCDN-202ENST00000373243 TBCKQ8TEA7 893 aa13.34□□□□□ -0.27
NCDN-202ENST00000373243 UBLCP1Q8WVY7 318 aaPredicted RBP13.34□□□□□ -0.27
NCDN-202ENST00000373243 SELENOOQ9BVL4 669 aa13.34□□□□□ -0.27
NCDN-202ENST00000373243 PPANQ9NQ55 473 aaKnown RBP13.34□□□□□ -0.27
NCDN-202ENST00000373243 TNS3Q68CZ2 1445 aa13.34□□□□□ -0.27
NCDN-202ENST00000373243 AKAP12Q02952 1782 aa13.34□□□□□ -0.27
NCDN-202ENST00000373243 MAP2K7O14733 419 aa13.34□□□□□ -0.27
NCDN-202ENST00000373243 MDM2Q00987 491 aaPredicted RBP13.34□□□□□ -0.27
NCDN-202ENST00000373243 TBX2Q13207 712 aaPredicted RBP13.34□□□□□ -0.27
NCDN-202ENST00000373243 FAM98CQ17RN3 349 aaKnown RBP13.34□□□□□ -0.27
NCDN-202ENST00000373243 MEX3CQ5U5Q3 659 aaKnown RBP13.34□□□□□ -0.27
NCDN-202ENST00000373243 RSRC2Q7L4I2 434 aaKnown RBP13.34□□□□□ -0.27
NCDN-202ENST00000373243 TBC1D31Q96DN5 1066 aa13.34□□□□□ -0.27
NCDN-202ENST00000373243 CCDC114Q96M63 670 aa13.34□□□□□ -0.27
NCDN-202ENST00000373243 CAPS2Q9BXY5 557 aa13.34□□□□□ -0.27
NCDN-202ENST00000373243 DCP1AQ9NPI6 582 aaPredicted RBP13.34□□□□□ -0.27
NCDN-202ENST00000373243 XRN1Q8IZH2 1706 aaKnown RBP13.34□□□□□ -0.27
NCDN-202ENST00000373243 MYBL2P10244 700 aa13.34□□□□□ -0.27
NCDN-202ENST00000373243 EEF1GP26641 437 aaKnown RBP13.34□□□□□ -0.27
NCDN-202ENST00000373243 KLHL30Q0D2K2 578 aa13.34□□□□□ -0.27
NCDN-202ENST00000373243 SLC9C1Q4G0N8 1177 aa13.34□□□□□ -0.27
NCDN-202ENST00000373243 RPUSD2Q8IZ73 545 aaKnown RBP13.34□□□□□ -0.27
NCDN-202ENST00000373243 TCEAL9Q9UHQ7 104 aa13.34□□□□□ -0.27
NCDN-202ENST00000373243 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.34□□□□□ -0.27
NCDN-202ENST00000373243 LRRIQ3A6PVS8 624 aaPredicted RBP13.33□□□□□ -0.28
NCDN-202ENST00000373243 RNF225M0QZC1 329 aaPredicted RBP13.33□□□□□ -0.28
NCDN-202ENST00000373243 PLEKP08567 350 aaPredicted RBP13.33□□□□□ -0.28
NCDN-202ENST00000373243 RFC4P35249 363 aa13.33□□□□□ -0.28
NCDN-202ENST00000373243 NAA35Q5VZE5 725 aa13.33□□□□□ -0.28
NCDN-202ENST00000373243 NEK8Q86SG6 692 aa13.33□□□□□ -0.28
NCDN-202ENST00000373243 TMEM139Q8IV31 216 aa13.33□□□□□ -0.28
NCDN-202ENST00000373243 LSM14BQ9BX40 385 aaKnown RBP13.33□□□□□ -0.28
NCDN-202ENST00000373243 TSGA10Q9BZW7 698 aa13.33□□□□□ -0.28
NCDN-202ENST00000373243 LACRTQ9GZZ8 138 aa13.33□□□□□ -0.28
NCDN-202ENST00000373243 EPB41L5Q9HCM4 733 aa13.33□□□□□ -0.28
NCDN-202ENST00000373243 MYO1AQ9UBC5 1043 aa13.33□□□□□ -0.28
NCDN-202ENST00000373243 JCADQ9P266 1359 aa13.33□□□□□ -0.28
NCDN-202ENST00000373243 CDHR2Q9BYE9 1310 aa13.33□□□□□ -0.28
NCDN-202ENST00000373243 TCRBV5S4A2TA0A5A2 114 aa13.33□□□□□ -0.28
NCDN-202ENST00000373243 TMEM110-MUSTN1A8MSY1 372 aa13.33□□□□□ -0.28
NCDN-202ENST00000373243 HGSO14964 777 aaPredicted RBP13.33□□□□□ -0.28
NCDN-202ENST00000373243 CRYMQ14894 314 aa13.33□□□□□ -0.28
NCDN-202ENST00000373243 KIAA0753Q2KHM9 967 aa13.33□□□□□ -0.28
NCDN-202ENST00000373243 KRT25Q7Z3Z0 450 aa13.33□□□□□ -0.28
NCDN-202ENST00000373243 VPS36Q86VN1 386 aa13.33□□□□□ -0.28
NCDN-202ENST00000373243 PROCA1Q8NCQ7 364 aaPredicted RBP13.33□□□□□ -0.28
NCDN-202ENST00000373243 ITFG2Q969R8 447 aa13.33□□□□□ -0.28
NCDN-202ENST00000373243 PIGSQ96S52 555 aa13.33□□□□□ -0.28
NCDN-202ENST00000373243 KRT12Q99456 494 aa13.33□□□□□ -0.28
NCDN-202ENST00000373243 ARPP21Q9UBL0 812 aaPredicted RBP13.33□□□□□ -0.28
NCDN-202ENST00000373243 MCM8Q9UJA3 840 aa13.33□□□□□ -0.28
NCDN-202ENST00000373243 PACSIN2Q9UNF0 486 aaPredicted RBP13.33□□□□□ -0.28
NCDN-202ENST00000373243 CCNE1P24864 410 aa13.33□□□□□ -0.28
NCDN-202ENST00000373243 ZBED6P86452 979 aa13.33□□□□□ -0.28
NCDN-202ENST00000373243 TROAPQ12815 778 aa13.33□□□□□ -0.28
NCDN-202ENST00000373243 STK4Q13043 487 aa13.33□□□□□ -0.28
NCDN-202ENST00000373243 PDCLQ13371 301 aa13.33□□□□□ -0.28
NCDN-202ENST00000373243 UBE4AQ14139 1066 aa13.33□□□□□ -0.28
NCDN-202ENST00000373243 KCTD19Q17RG1 926 aaPredicted RBP13.33□□□□□ -0.28
NCDN-202ENST00000373243 PLA2G12BQ9BX93 195 aa13.33□□□□□ -0.28
NCDN-202ENST00000373243 FAM208AQ9UK61 1670 aaKnown RBP13.33□□□□□ -0.28
NCDN-202ENST00000373243 KCNK3O14649 394 aa13.32□□□□□ -0.28
NCDN-202ENST00000373243 FANCGO15287 622 aa13.32□□□□□ -0.28
NCDN-202ENST00000373243 KLRK1P26718 216 aa13.32□□□□□ -0.28
NCDN-202ENST00000373243 KIF11P52732 1056 aa13.32□□□□□ -0.28
NCDN-202ENST00000373243 PMS1P54277 932 aaKnown RBP13.32□□□□□ -0.28
NCDN-202ENST00000373243 PFKFB3Q16875 520 aaPredicted RBP13.32□□□□□ -0.28
NCDN-202ENST00000373243 CFAP221Q4G0U5 840 aa13.32□□□□□ -0.28
NCDN-202ENST00000373243 ANKRD40Q6AI12 368 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms