RNA–Protein interactions for RNA: ENST00000372856.7

PABPC4-201, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC4, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-201ENST00000372856 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.58■□□□□ 0.4
PABPC4-201ENST00000372856 DGKHQ86XP1 1220 aa17.58■□□□□ 0.4
PABPC4-201ENST00000372856 NOC3LQ8WTT2 800 aaKnown RBP17.58■□□□□ 0.4
PABPC4-201ENST00000372856 NUP58Q9BVL2 599 aa17.58■□□□□ 0.4
PABPC4-201ENST00000372856 VIPAS39Q9H9C1 493 aa17.58■□□□□ 0.4
PABPC4-201ENST00000372856 STXBP3O00186 592 aa17.57■□□□□ 0.4
PABPC4-201ENST00000372856 CCNT1O60563 726 aaKnown RBP17.57■□□□□ 0.4
PABPC4-201ENST00000372856 MCM3P25205 808 aa17.57■□□□□ 0.4
PABPC4-201ENST00000372856 GGCXP38435 758 aa17.57■□□□□ 0.4
PABPC4-201ENST00000372856 GRM4Q14833 912 aa17.57■□□□□ 0.4
PABPC4-201ENST00000372856 DDB1Q16531 1140 aa17.57■□□□□ 0.4
PABPC4-201ENST00000372856 MIIPQ5JXC2 388 aa17.57■□□□□ 0.4
PABPC4-201ENST00000372856 ZKSCAN4Q969J2 545 aaPredicted RBP17.57■□□□□ 0.4
PABPC4-201ENST00000372856 CCDC42Q96M95 316 aa17.57■□□□□ 0.4
PABPC4-201ENST00000372856 NUTM2BA6NNL0 878 aaPredicted RBP17.57■□□□□ 0.4
PABPC4-201ENST00000372856 NUTM2EB1AL46 878 aaPredicted RBP17.57■□□□□ 0.4
PABPC4-201ENST00000372856 AARSP49588 968 aaKnown RBP eCLIP17.57■□□□□ 0.4
PABPC4-201ENST00000372856 RPS8P62241 208 aaKnown RBP17.57■□□□□ 0.4
PABPC4-201ENST00000372856 CCDC170Q8IYT3 715 aa17.57■□□□□ 0.4
PABPC4-201ENST00000372856 PSMB7Q99436 277 aa17.57■□□□□ 0.4
PABPC4-201ENST00000372856 CRACR2AQ9BSW2 395 aa17.57■□□□□ 0.4
PABPC4-201ENST00000372856 SELENOOQ9BVL4 669 aa17.57■□□□□ 0.4
PABPC4-201ENST00000372856 BARHL2Q9NY43 387 aa17.57■□□□□ 0.4
PABPC4-201ENST00000372856 FLT1P17948 1338 aa17.57■□□□□ 0.4
PABPC4-201ENST00000372856 PRPF6O94906 941 aaKnown RBP17.56■□□□□ 0.4
PABPC4-201ENST00000372856 MYL1P05976 194 aa17.56■□□□□ 0.4
PABPC4-201ENST00000372856 TSPY3P0CV98 308 aa17.56■□□□□ 0.4
PABPC4-201ENST00000372856 TSPY8P0CW00 308 aa17.56■□□□□ 0.4
PABPC4-201ENST00000372856 TECP42680 631 aa17.56■□□□□ 0.4
PABPC4-201ENST00000372856 SPA17Q15506 151 aa17.56■□□□□ 0.4
PABPC4-201ENST00000372856 EZH2Q15910 746 aaKnown RBP17.56■□□□□ 0.4
PABPC4-201ENST00000372856 C12orf60Q5U649 245 aa17.56■□□□□ 0.4
PABPC4-201ENST00000372856 CCDC47Q96A33 483 aaKnown RBP17.56■□□□□ 0.4
PABPC4-201ENST00000372856 MLXIPQ9HAP2 919 aa17.56■□□□□ 0.4
PABPC4-201ENST00000372856 SLC39A2Q9NP94 309 aa17.56■□□□□ 0.4
PABPC4-201ENST00000372856 ZC3H4Q9UPT8 1303 aaKnown RBP17.56■□□□□ 0.4
PABPC4-201ENST00000372856 BICDL2A1A5D9 508 aa17.56■□□□□ 0.4
PABPC4-201ENST00000372856 TARSL2A2RTX5 802 aaKnown RBP17.56■□□□□ 0.4
PABPC4-201ENST00000372856 MATR3P43243 847 aaKnown RBP eCLIP17.56■□□□□ 0.4
PABPC4-201ENST00000372856 CCNI2Q6ZMN8 369 aaPredicted RBP17.56■□□□□ 0.4
PABPC4-201ENST00000372856 RPGRIP1Q96KN7 1286 aa17.56■□□□□ 0.4
PABPC4-201ENST00000372856 FAM207AQ9NSI2 230 aaPredicted RBP17.56■□□□□ 0.4
PABPC4-201ENST00000372856 OR52Z1P0C646 297 aa17.56■□□□□ 0.4
PABPC4-201ENST00000372856 VAV2P52735 878 aa17.56■□□□□ 0.4
PABPC4-201ENST00000372856 ZNF662Q6ZS27 426 aa17.56■□□□□ 0.4
PABPC4-201ENST00000372856 POTEDQ86YR6 584 aa17.56■□□□□ 0.4
PABPC4-201ENST00000372856 C2CD5Q86YS7 1000 aa17.56■□□□□ 0.4
PABPC4-201ENST00000372856 RETREG2Q8NC44 543 aa17.56■□□□□ 0.4
PABPC4-201ENST00000372856 CAPN6Q9Y6Q1 641 aa17.56■□□□□ 0.4
PABPC4-201ENST00000372856 EPHB6O15197 1021 aa17.55■□□□□ 0.4
PABPC4-201ENST00000372856 GNAQP50148 359 aa17.55■□□□□ 0.4
PABPC4-201ENST00000372856 NAPAP54920 295 aa17.55■□□□□ 0.4
PABPC4-201ENST00000372856 FKBP15Q5T1M5 1219 aa17.55■□□□□ 0.4
PABPC4-201ENST00000372856 SH3RF3Q8TEJ3 882 aaPredicted RBP17.55■□□□□ 0.4
PABPC4-201ENST00000372856 HDAC7Q8WUI4 952 aa17.55■□□□□ 0.4
PABPC4-201ENST00000372856 ZBTB12Q9Y330 459 aaPredicted RBP17.55■□□□□ 0.4
PABPC4-201ENST00000372856 SHTN1A0MZ66 631 aa17.55■□□□□ 0.4
PABPC4-201ENST00000372856 KCNQ2O43526 872 aa17.55■□□□□ 0.4
PABPC4-201ENST00000372856 IRAK1P51617 712 aa17.55■□□□□ 0.4
PABPC4-201ENST00000372856 MARCH10Q8NA82 808 aaPredicted RBP17.55■□□□□ 0.4
PABPC4-201ENST00000372856 VAT1LQ9HCJ6 419 aa17.55■□□□□ 0.4
PABPC4-201ENST00000372856 SMARCAL1Q9NZC9 954 aa17.55■□□□□ 0.4
PABPC4-201ENST00000372856 ANO9A1A5B4 782 aa17.54■□□□□ 0.4
PABPC4-201ENST00000372856 MOCS3O95396 460 aa17.54■□□□□ 0.4
PABPC4-201ENST00000372856 CXCR5P32302 372 aa17.54■□□□□ 0.4
PABPC4-201ENST00000372856 DIXDC1Q155Q3 683 aa17.54■□□□□ 0.4
PABPC4-201ENST00000372856 SLC51AQ86UW1 340 aa17.54■□□□□ 0.4
PABPC4-201ENST00000372856 FAM114A1Q8IWE2 563 aa17.54■□□□□ 0.4
PABPC4-201ENST00000372856 ZNF444Q8N0Y2 327 aaPredicted RBP17.54■□□□□ 0.4
PABPC4-201ENST00000372856 KIAA0895Q8NCT3 520 aa17.54■□□□□ 0.4
PABPC4-201ENST00000372856 TMEM47Q9BQJ4 181 aa17.54■□□□□ 0.4
PABPC4-201ENST00000372856 IFIH1Q9BYX4 1025 aaKnown RBP17.54■□□□□ 0.4
PABPC4-201ENST00000372856 SEMA6BQ9H3T3 888 aa17.54■□□□□ 0.4
PABPC4-201ENST00000372856 SAP30BPQ9UHR5 308 aaKnown RBP17.54■□□□□ 0.4
PABPC4-201ENST00000372856 MCM8Q9UJA3 840 aa17.54■□□□□ 0.4
PABPC4-201ENST00000372856 SH3BP1Q9Y3L3 701 aa17.54■□□□□ 0.4
PABPC4-201ENST00000372856 A0A1B0GUL6 1792 aa17.54■□□□□ 0.4
PABPC4-201ENST00000372856 KLRF2D3W0D1 207 aa17.54■□□□□ 0.4
PABPC4-201ENST00000372856 C21orf2O43822 256 aa17.54■□□□□ 0.4
PABPC4-201ENST00000372856 TBC1D9BQ66K14 1250 aa17.54■□□□□ 0.4
PABPC4-201ENST00000372856 OTUD6BQ8N6M0 293 aa17.54■□□□□ 0.4
PABPC4-201ENST00000372856 DAGLBQ8NCG7 672 aa17.54■□□□□ 0.4
PABPC4-201ENST00000372856 PURBQ96QR8 312 aaKnown RBP17.54■□□□□ 0.4
PABPC4-201ENST00000372856 TRIM6Q9C030 488 aaPredicted RBP17.54■□□□□ 0.4
PABPC4-201ENST00000372856 ARHGAP20Q9P2F6 1191 aa17.54■□□□□ 0.4
PABPC4-201ENST00000372856 SRCAPQ6ZRS2 3230 aa17.54■□□□□ 0.4
PABPC4-201ENST00000372856 MYH14Q7Z406 1995 aaKnown RBP17.53■□□□□ 0.4
PABPC4-201ENST00000372856 AGPSO00116 658 aa17.53■□□□□ 0.4
PABPC4-201ENST00000372856 SSBP05455 408 aaKnown RBP eCLIP17.53■□□□□ 0.4
PABPC4-201ENST00000372856 PRPHP41219 470 aa17.53■□□□□ 0.4
PABPC4-201ENST00000372856 CREG2Q8IUH2 290 aa17.53■□□□□ 0.4
PABPC4-201ENST00000372856 TEX11Q8IYF3 940 aa17.53■□□□□ 0.4
PABPC4-201ENST00000372856 ERGIC2Q96RQ1 377 aa17.53■□□□□ 0.4
PABPC4-201ENST00000372856 MMRN2Q9H8L6 949 aa17.53■□□□□ 0.4
PABPC4-201ENST00000372856 DMGDHQ9UI17 866 aaKnown RBP17.53■□□□□ 0.4
PABPC4-201ENST00000372856 SNX12Q9UMY4 172 aa17.53■□□□□ 0.4
PABPC4-201ENST00000372856 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.53■□□□□ 0.4
PABPC4-201ENST00000372856 PHLPP1O60346 1717 aa17.53■□□□□ 0.4
PABPC4-201ENST00000372856 DLEC1Q9Y238 1755 aa17.53■□□□□ 0.4
PABPC4-201ENST00000372856 LAD1O00515 517 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms