RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 GBP6Q6ZN66 633 aa16.44■□□□□ 0.22
COL9A2-202ENST00000372748 P2RX5Q93086 422 aa16.44■□□□□ 0.22
COL9A2-202ENST00000372748 CAPN7Q9Y6W3 813 aa16.44■□□□□ 0.22
COL9A2-202ENST00000372748 BUB1O43683 1085 aa16.44■□□□□ 0.22
COL9A2-202ENST00000372748 AKR1B10O60218 316 aa16.44■□□□□ 0.22
COL9A2-202ENST00000372748 C8orf74Q6P047 294 aa16.44■□□□□ 0.22
COL9A2-202ENST00000372748 CLEC4GQ6UXB4 293 aa16.44■□□□□ 0.22
COL9A2-202ENST00000372748 PTF1AQ7RTS3 328 aa16.44■□□□□ 0.22
COL9A2-202ENST00000372748 STAG2Q8N3U4 1231 aa16.44■□□□□ 0.22
COL9A2-202ENST00000372748 RETREG2Q8NC44 543 aa16.44■□□□□ 0.22
COL9A2-202ENST00000372748 DYNLL2Q96FJ2 89 aa16.44■□□□□ 0.22
COL9A2-202ENST00000372748 NGLY1Q96IV0 654 aa16.44■□□□□ 0.22
COL9A2-202ENST00000372748 CDCA7Q9BWT1 371 aaPredicted RBP16.44■□□□□ 0.22
COL9A2-202ENST00000372748 TSGA10Q9BZW7 698 aa16.44■□□□□ 0.22
COL9A2-202ENST00000372748 MYO1FO00160 1098 aa16.43■□□□□ 0.22
COL9A2-202ENST00000372748 GUCY1A3Q02108 690 aa16.43■□□□□ 0.22
COL9A2-202ENST00000372748 NNTQ13423 1086 aa16.43■□□□□ 0.22
COL9A2-202ENST00000372748 IFT81Q8WYA0 676 aa16.43■□□□□ 0.22
COL9A2-202ENST00000372748 KBTBD4Q9NVX7 518 aa16.43■□□□□ 0.22
COL9A2-202ENST00000372748 CCDC194A0A1B0GVG4 234 aa16.43■□□□□ 0.22
COL9A2-202ENST00000372748 FAM153BP0C7A2 387 aa16.43■□□□□ 0.22
COL9A2-202ENST00000372748 NAP1L1P55209 391 aaKnown RBP16.43■□□□□ 0.22
COL9A2-202ENST00000372748 APBA1Q02410 837 aa16.43■□□□□ 0.22
COL9A2-202ENST00000372748 FAM153CQ494X1 144 aa16.43■□□□□ 0.22
COL9A2-202ENST00000372748 RCSD1Q6JBY9 416 aa16.43■□□□□ 0.22
COL9A2-202ENST00000372748 CERKQ8TCT0 537 aa16.43■□□□□ 0.22
COL9A2-202ENST00000372748 MMRN2Q9H8L6 949 aa16.43■□□□□ 0.22
COL9A2-202ENST00000372748 FAM153AQ9UHL3 310 aa16.43■□□□□ 0.22
COL9A2-202ENST00000372748 ORC4O43929 436 aa16.42■□□□□ 0.22
COL9A2-202ENST00000372748 ASIC1P78348 528 aa16.42■□□□□ 0.22
COL9A2-202ENST00000372748 TFAP4Q01664 338 aa16.42■□□□□ 0.22
COL9A2-202ENST00000372748 DHTKD1Q96HY7 919 aaPredicted RBP16.42■□□□□ 0.22
COL9A2-202ENST00000372748 CCDC43Q96MW1 224 aaKnown RBP16.42■□□□□ 0.22
COL9A2-202ENST00000372748 MYCBPQ99417 103 aaPredicted RBP16.42■□□□□ 0.22
COL9A2-202ENST00000372748 NFU1Q9UMS0 254 aa16.42■□□□□ 0.22
COL9A2-202ENST00000372748 HYOU1Q9Y4L1 999 aa16.42■□□□□ 0.22
COL9A2-202ENST00000372748 MYH10P35580 1976 aa16.42■□□□□ 0.22
COL9A2-202ENST00000372748 H0YHG0 523 aa16.42■□□□□ 0.22
COL9A2-202ENST00000372748 GLI1P08151 1106 aa16.42■□□□□ 0.22
COL9A2-202ENST00000372748 PLCG1P19174 1290 aa16.42■□□□□ 0.22
COL9A2-202ENST00000372748 CCNE1P24864 410 aa16.42■□□□□ 0.22
COL9A2-202ENST00000372748 CARSP49589 748 aaKnown RBP16.42■□□□□ 0.22
COL9A2-202ENST00000372748 GUCY2FP51841 1108 aa16.42■□□□□ 0.22
COL9A2-202ENST00000372748 EMBQ6PCB8 327 aa16.42■□□□□ 0.22
COL9A2-202ENST00000372748 TMC4Q7Z404 712 aa16.42■□□□□ 0.22
COL9A2-202ENST00000372748 PAFAH1B1P43034 410 aa16.41■□□□□ 0.22
COL9A2-202ENST00000372748 RNASE9P60153 205 aaKnown RBP16.41■□□□□ 0.22
COL9A2-202ENST00000372748 RNPC3Q96LT9 517 aaKnown RBP16.41■□□□□ 0.22
COL9A2-202ENST00000372748 NLRP3Q96P20 1036 aa16.41■□□□□ 0.22
COL9A2-202ENST00000372748 ALS2CR12Q96Q35 445 aa16.41■□□□□ 0.22
COL9A2-202ENST00000372748 PLAGL2Q9UPG8 496 aa16.41■□□□□ 0.22
COL9A2-202ENST00000372748 TCP1P17987 556 aaKnown RBP16.41■□□□□ 0.22
COL9A2-202ENST00000372748 RASSF7Q02833 373 aa16.41■□□□□ 0.22
COL9A2-202ENST00000372748 GFPT1Q06210 699 aaPredicted RBP16.41■□□□□ 0.22
COL9A2-202ENST00000372748 RRAGAQ7L523 313 aa16.41■□□□□ 0.22
COL9A2-202ENST00000372748 NBPF5PQ86XG9 351 aaPredicted RBP16.41■□□□□ 0.22
COL9A2-202ENST00000372748 USP17L3A6NCW0 530 aa16.4■□□□□ 0.22
COL9A2-202ENST00000372748 USP17L4A6NCW7 530 aa16.4■□□□□ 0.22
COL9A2-202ENST00000372748 PCP11498 1178 aaKnown RBP16.4■□□□□ 0.22
COL9A2-202ENST00000372748 KCTD19Q17RG1 926 aaPredicted RBP16.4■□□□□ 0.22
COL9A2-202ENST00000372748 ALS2CLQ60I27 953 aa16.4■□□□□ 0.22
COL9A2-202ENST00000372748 USP17L1Q7RTZ2 530 aa16.4■□□□□ 0.22
COL9A2-202ENST00000372748 DZIP1Q86YF9 867 aaKnown RBP16.4■□□□□ 0.22
COL9A2-202ENST00000372748 POTEDQ86YR6 584 aa16.4■□□□□ 0.22
COL9A2-202ENST00000372748 OTUD6BQ8N6M0 293 aa16.4■□□□□ 0.22
COL9A2-202ENST00000372748 NOC3LQ8WTT2 800 aaKnown RBP16.4■□□□□ 0.22
COL9A2-202ENST00000372748 MTMR8Q96EF0 704 aa16.4■□□□□ 0.22
COL9A2-202ENST00000372748 SLC39A2Q9NP94 309 aa16.4■□□□□ 0.22
COL9A2-202ENST00000372748 IL17RBQ9NRM6 502 aa16.4■□□□□ 0.22
COL9A2-202ENST00000372748 ATP8A2Q9NTI2 1148 aa16.4■□□□□ 0.22
COL9A2-202ENST00000372748 LRRC53A6NM62 1247 aa16.4■□□□□ 0.22
COL9A2-202ENST00000372748 MAGEA1P43355 309 aa16.4■□□□□ 0.22
COL9A2-202ENST00000372748 SEC24CP53992 1094 aa16.4■□□□□ 0.22
COL9A2-202ENST00000372748 GUCY2DQ02846 1103 aa16.4■□□□□ 0.22
COL9A2-202ENST00000372748 TRADDQ15628 312 aa16.4■□□□□ 0.22
COL9A2-202ENST00000372748 ERGIC2Q96RQ1 377 aa16.4■□□□□ 0.22
COL9A2-202ENST00000372748 CEP89Q96ST8 783 aa16.4■□□□□ 0.22
COL9A2-202ENST00000372748 TLR10Q9BXR5 811 aa16.4■□□□□ 0.22
COL9A2-202ENST00000372748 TRIM9Q9C026 710 aa16.4■□□□□ 0.22
COL9A2-202ENST00000372748 PCDHA4Q9UN74 947 aa16.4■□□□□ 0.22
COL9A2-202ENST00000372748 A0A1B0GUL6 1792 aa16.4■□□□□ 0.22
COL9A2-202ENST00000372748 BICDL2A1A5D9 508 aa16.4■□□□□ 0.22
COL9A2-202ENST00000372748 ZNF233A6NK53 670 aa16.4■□□□□ 0.22
COL9A2-202ENST00000372748 KIAA0754O94854 1291 aa16.4■□□□□ 0.22
COL9A2-202ENST00000372748 EPB41P11171 864 aaKnown RBP16.4■□□□□ 0.22
COL9A2-202ENST00000372748 CALML3P27482 149 aa16.4■□□□□ 0.22
COL9A2-202ENST00000372748 HSPA1LP34931 641 aa16.4■□□□□ 0.22
COL9A2-202ENST00000372748 SKOR1P84550 965 aa16.4■□□□□ 0.22
COL9A2-202ENST00000372748 TXNRD1Q16881 649 aa16.4■□□□□ 0.22
COL9A2-202ENST00000372748 SWT1Q5T5J6 900 aaKnown RBP16.4■□□□□ 0.22
COL9A2-202ENST00000372748 PNMA1Q8ND90 353 aa16.4■□□□□ 0.22
COL9A2-202ENST00000372748 EPB41L5Q9HCM4 733 aa16.4■□□□□ 0.22
COL9A2-202ENST00000372748 ARPP21Q9UBL0 812 aaPredicted RBP16.4■□□□□ 0.22
COL9A2-202ENST00000372748 THRAP3Q9Y2W1 955 aaKnown RBP16.4■□□□□ 0.22
COL9A2-202ENST00000372748 CDK17Q00537 523 aa16.39■□□□□ 0.21
COL9A2-202ENST00000372748 CFAP58Q5T655 872 aa16.39■□□□□ 0.21
COL9A2-202ENST00000372748 ZNF572Q7Z3I7 529 aaPredicted RBP16.39■□□□□ 0.21
COL9A2-202ENST00000372748 FAM114A1Q8IWE2 563 aa16.39■□□□□ 0.21
COL9A2-202ENST00000372748 CCDC155Q8N6L0 562 aa16.39■□□□□ 0.21
COL9A2-202ENST00000372748 SLC44A5Q8NCS7 719 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms