RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 SGMS1Q86VZ5 419 aa11.5□□□□□ -0.57
NUP188-201ENST00000372577 TRIM11Q96F44 468 aa11.5□□□□□ -0.57
NUP188-201ENST00000372577 ITSN1Q15811 1721 aa11.5□□□□□ -0.57
NUP188-201ENST00000372577 NDUFAB1O14561 156 aa11.5□□□□□ -0.57
NUP188-201ENST00000372577 AFPP02771 609 aaKnown RBP11.5□□□□□ -0.57
NUP188-201ENST00000372577 CD19P15391 556 aa11.5□□□□□ -0.57
NUP188-201ENST00000372577 DNAJC21Q5F1R6 531 aaKnown RBP11.5□□□□□ -0.57
NUP188-201ENST00000372577 TMEM179Q6ZVK1 233 aa11.5□□□□□ -0.57
NUP188-201ENST00000372577 INTS8Q75QN2 995 aaKnown RBP11.5□□□□□ -0.57
NUP188-201ENST00000372577 TBC1D10CQ8IV04 446 aa11.5□□□□□ -0.57
NUP188-201ENST00000372577 CHAMP1Q96JM3 812 aa11.5□□□□□ -0.57
NUP188-201ENST00000372577 ZNF577Q9BSK1 485 aa11.5□□□□□ -0.57
NUP188-201ENST00000372577 MED4Q9NPJ6 270 aa11.5□□□□□ -0.57
NUP188-201ENST00000372577 PYCARDQ9ULZ3 195 aa11.5□□□□□ -0.57
NUP188-201ENST00000372577 PCDHB6Q9Y5E3 794 aa11.5□□□□□ -0.57
NUP188-201ENST00000372577 ODR4Q5SWX8 454 aa11.5□□□□□ -0.57
NUP188-201ENST00000372577 SRGAP1Q7Z6B7 1085 aa11.5□□□□□ -0.57
NUP188-201ENST00000372577 MICALL1Q8N3F8 863 aa11.5□□□□□ -0.57
NUP188-201ENST00000372577 BBOF1Q8ND07 529 aa11.5□□□□□ -0.57
NUP188-201ENST00000372577 P3H4Q92791 437 aa11.5□□□□□ -0.57
NUP188-201ENST00000372577 ACCSQ96QU6 501 aa11.5□□□□□ -0.57
NUP188-201ENST00000372577 HAUS2Q9NVX0 235 aa11.5□□□□□ -0.57
NUP188-201ENST00000372577 OAS2P29728 719 aaKnown RBP11.49□□□□□ -0.57
NUP188-201ENST00000372577 MFAP3P55082 362 aa11.49□□□□□ -0.57
NUP188-201ENST00000372577 ZBED6P86452 979 aa11.49□□□□□ -0.57
NUP188-201ENST00000372577 SLC27A3Q5K4L6 730 aa11.49□□□□□ -0.57
NUP188-201ENST00000372577 DENND2CQ68D51 928 aa11.49□□□□□ -0.57
NUP188-201ENST00000372577 DISC1Q9NRI5 854 aa11.49□□□□□ -0.57
NUP188-201ENST00000372577 ZNF215Q9UL58 517 aaPredicted RBP11.49□□□□□ -0.57
NUP188-201ENST00000372577 NR2F2P24468 414 aa11.49□□□□□ -0.57
NUP188-201ENST00000372577 POLR2BP30876 1174 aaKnown RBP11.49□□□□□ -0.57
NUP188-201ENST00000372577 RNASE9P60153 205 aaKnown RBP11.49□□□□□ -0.57
NUP188-201ENST00000372577 TSC1Q92574 1164 aa11.49□□□□□ -0.57
NUP188-201ENST00000372577 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.49□□□□□ -0.57
NUP188-201ENST00000372577 KCNK3O14649 394 aa11.49□□□□□ -0.57
NUP188-201ENST00000372577 MAN1A1P33908 653 aa11.49□□□□□ -0.57
NUP188-201ENST00000372577 ARHGAP25P42331 645 aa11.49□□□□□ -0.57
NUP188-201ENST00000372577 MYL7Q01449 175 aa11.49□□□□□ -0.57
NUP188-201ENST00000372577 CCDC117Q8IWD4 279 aaPredicted RBP11.49□□□□□ -0.57
NUP188-201ENST00000372577 ANKRD35Q8N283 1001 aa11.49□□□□□ -0.57
NUP188-201ENST00000372577 SRP68Q9UHB9 627 aaKnown RBP11.49□□□□□ -0.57
NUP188-201ENST00000372577 NOD1Q9Y239 953 aa11.49□□□□□ -0.57
NUP188-201ENST00000372577 DEPDC5O75140 1603 aa11.49□□□□□ -0.57
NUP188-201ENST00000372577 ORC4O43929 436 aa11.49□□□□□ -0.57
NUP188-201ENST00000372577 TFDP1Q14186 410 aa11.49□□□□□ -0.57
NUP188-201ENST00000372577 HADHQ16836 314 aaKnown RBP11.49□□□□□ -0.57
NUP188-201ENST00000372577 SUPT20HL1Q3ZLR7 823 aa11.49□□□□□ -0.57
NUP188-201ENST00000372577 SMCR8Q8TEV9 937 aaPredicted RBP11.49□□□□□ -0.57
NUP188-201ENST00000372577 LY9Q9HBG7 655 aa11.49□□□□□ -0.57
NUP188-201ENST00000372577 SUGT1Q9Y2Z0 365 aa11.49□□□□□ -0.57
NUP188-201ENST00000372577 UTYO14607 1347 aa11.49□□□□□ -0.57
NUP188-201ENST00000372577 NEDD4P46934 1319 aa11.49□□□□□ -0.57
NUP188-201ENST00000372577 CEMIPQ8WUJ3 1361 aa11.49□□□□□ -0.57
NUP188-201ENST00000372577 KRIT1O00522 736 aa11.49□□□□□ -0.57
NUP188-201ENST00000372577 VIMP08670 466 aaKnown RBP11.49□□□□□ -0.57
NUP188-201ENST00000372577 ATF7P17544 494 aaPredicted RBP11.49□□□□□ -0.57
NUP188-201ENST00000372577 HPDP32754 393 aaPredicted RBP11.49□□□□□ -0.57
NUP188-201ENST00000372577 DPY19L2Q6NUT2 758 aa11.49□□□□□ -0.57
NUP188-201ENST00000372577 SEPT12Q8IYM1 358 aa11.49□□□□□ -0.57
NUP188-201ENST00000372577 RDH13Q8NBN7 331 aa11.49□□□□□ -0.57
NUP188-201ENST00000372577 RASGRP4Q8TDF6 673 aa11.49□□□□□ -0.57
NUP188-201ENST00000372577 CEP63Q96MT8 703 aa11.49□□□□□ -0.57
NUP188-201ENST00000372577 ADPGKQ9BRR6 497 aa11.49□□□□□ -0.57
NUP188-201ENST00000372577 FTOQ9C0B1 505 aaKnown RBP eCLIP11.49□□□□□ -0.57
NUP188-201ENST00000372577 TYW1Q9NV66 732 aaKnown RBP11.49□□□□□ -0.57
NUP188-201ENST00000372577 BCS1LQ9Y276 419 aa11.49□□□□□ -0.57
NUP188-201ENST00000372577 RBL2Q08999 1139 aa11.48□□□□□ -0.57
NUP188-201ENST00000372577 KCTD1Q719H9 257 aa11.48□□□□□ -0.57
NUP188-201ENST00000372577 CACTINQ8WUQ7 758 aaKnown RBP11.48□□□□□ -0.57
NUP188-201ENST00000372577 DCPSQ96C86 337 aaKnown RBP11.48□□□□□ -0.57
NUP188-201ENST00000372577 RAB20Q9NX57 234 aa11.48□□□□□ -0.57
NUP188-201ENST00000372577 DDX41Q9UJV9 622 aaKnown RBP11.48□□□□□ -0.57
NUP188-201ENST00000372577 KRT19P08727 400 aa11.48□□□□□ -0.57
NUP188-201ENST00000372577 POLGP54098 1239 aaPredicted RBP11.48□□□□□ -0.57
NUP188-201ENST00000372577 ADD3Q9UEY8 706 aaKnown RBP11.48□□□□□ -0.57
NUP188-201ENST00000372577 SPATA31D1Q6ZQQ2 1576 aa11.48□□□□□ -0.57
NUP188-201ENST00000372577 DAPK3O43293 454 aa11.48□□□□□ -0.57
NUP188-201ENST00000372577 RXRBP28702 533 aa11.48□□□□□ -0.57
NUP188-201ENST00000372577 LACTBP83111 547 aaPredicted RBP11.48□□□□□ -0.57
NUP188-201ENST00000372577 ERCC6LQ2NKX8 1250 aa11.48□□□□□ -0.57
NUP188-201ENST00000372577 DYNLL2Q96FJ2 89 aa11.48□□□□□ -0.57
NUP188-201ENST00000372577 VWDEQ8N2E2 1590 aa11.48□□□□□ -0.57
NUP188-201ENST00000372577 NBPF26B4DH59 902 aa11.48□□□□□ -0.57
NUP188-201ENST00000372577 TMOD1P28289 359 aa11.48□□□□□ -0.57
NUP188-201ENST00000372577 TAF12Q16514 161 aa11.48□□□□□ -0.57
NUP188-201ENST00000372577 TTC31Q49AM3 519 aaPredicted RBP11.48□□□□□ -0.57
NUP188-201ENST00000372577 NBPF10Q6P3W6 841 aaKnown RBP11.48□□□□□ -0.57
NUP188-201ENST00000372577 USP17L2Q6R6M4 530 aa11.48□□□□□ -0.57
NUP188-201ENST00000372577 ATG9AQ7Z3C6 839 aa11.48□□□□□ -0.57
NUP188-201ENST00000372577 SULF1Q8IWU6 871 aa11.48□□□□□ -0.57
NUP188-201ENST00000372577 FAM186BQ8IYM0 893 aa11.48□□□□□ -0.57
NUP188-201ENST00000372577 NBPF15Q8N660 670 aa11.48□□□□□ -0.57
NUP188-201ENST00000372577 NT5C1BQ96P26 610 aa11.48□□□□□ -0.57
NUP188-201ENST00000372577 USTQ9Y2C2 406 aa11.48□□□□□ -0.57
NUP188-201ENST00000372577 RIPOR2Q9Y4F9 1068 aa11.48□□□□□ -0.57
NUP188-201ENST00000372577 DIP2BQ9P265 1576 aa11.47□□□□□ -0.57
NUP188-201ENST00000372577 PLCG1P19174 1290 aa11.47□□□□□ -0.57
NUP188-201ENST00000372577 ERCC3P19447 782 aa11.47□□□□□ -0.57
NUP188-201ENST00000372577 GRM4Q14833 912 aa11.47□□□□□ -0.57
NUP188-201ENST00000372577 DIXDC1Q155Q3 683 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms