RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 IL1R1P14778 569 aa11.1□□□□□ -0.63
KDM4A-201ENST00000372396 CDC25BP30305 580 aa11.1□□□□□ -0.63
KDM4A-201ENST00000372396 PPP1R18Q6NYC8 613 aa11.1□□□□□ -0.63
KDM4A-201ENST00000372396 C15orf52Q6ZUT6 534 aaKnown RBP11.1□□□□□ -0.63
KDM4A-201ENST00000372396 C16orf86Q6ZW13 317 aa11.1□□□□□ -0.63
KDM4A-201ENST00000372396 TRIM74Q86UV6 250 aa11.1□□□□□ -0.63
KDM4A-201ENST00000372396 TRIM73Q86UV7 250 aa11.1□□□□□ -0.63
KDM4A-201ENST00000372396 CNGA4Q8IV77 575 aa11.1□□□□□ -0.63
KDM4A-201ENST00000372396 SYCP3Q8IZU3 236 aa11.1□□□□□ -0.63
KDM4A-201ENST00000372396 ACRBPQ8NEB7 543 aa11.1□□□□□ -0.63
KDM4A-201ENST00000372396 BAG1Q99933 345 aaPredicted RBP11.1□□□□□ -0.63
KDM4A-201ENST00000372396 PCDHA5Q9Y5H7 936 aa11.1□□□□□ -0.63
KDM4A-201ENST00000372396 IKBKBO14920 756 aa11.09□□□□□ -0.63
KDM4A-201ENST00000372396 WDHD1O75717 1129 aaPredicted RBP11.09□□□□□ -0.63
KDM4A-201ENST00000372396 ZRANB2O95218 330 aaKnown RBP eCLIP11.09□□□□□ -0.63
KDM4A-201ENST00000372396 BMP3P12645 472 aa11.09□□□□□ -0.63
KDM4A-201ENST00000372396 MCM3P25205 808 aa11.09□□□□□ -0.63
KDM4A-201ENST00000372396 IQCEQ6IPM2 695 aa11.09□□□□□ -0.63
KDM4A-201ENST00000372396 NYAP1Q6ZVC0 841 aa11.09□□□□□ -0.63
KDM4A-201ENST00000372396 PPP1R13BQ96KQ4 1090 aa11.09□□□□□ -0.63
KDM4A-201ENST00000372396 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.09□□□□□ -0.63
KDM4A-201ENST00000372396 ATRNO75882 1429 aa11.09□□□□□ -0.63
KDM4A-201ENST00000372396 MYL1P05976 194 aa11.09□□□□□ -0.63
KDM4A-201ENST00000372396 MYBL2P10244 700 aa11.09□□□□□ -0.63
KDM4A-201ENST00000372396 TUBB4BP68371 445 aa11.09□□□□□ -0.63
KDM4A-201ENST00000372396 KIFC2Q96AC6 838 aa11.09□□□□□ -0.63
KDM4A-201ENST00000372396 RMI1Q9H9A7 625 aa11.09□□□□□ -0.63
KDM4A-201ENST00000372396 NHSL1Q5SYE7 1610 aa11.09□□□□□ -0.63
KDM4A-201ENST00000372396 PSDA5PKW4 1024 aaPredicted RBP11.09□□□□□ -0.63
KDM4A-201ENST00000372396 CFBP00751 764 aa11.09□□□□□ -0.63
KDM4A-201ENST00000372396 TUBBP07437 444 aa11.09□□□□□ -0.63
KDM4A-201ENST00000372396 SRGNP10124 158 aa11.09□□□□□ -0.63
KDM4A-201ENST00000372396 HDLBPQ00341 1268 aaKnown RBP11.09□□□□□ -0.63
KDM4A-201ENST00000372396 UBXN1Q04323 297 aa11.09□□□□□ -0.63
KDM4A-201ENST00000372396 ORC2Q13416 577 aaPredicted RBP11.09□□□□□ -0.63
KDM4A-201ENST00000372396 E2F5Q15329 346 aa11.09□□□□□ -0.63
KDM4A-201ENST00000372396 WDR78Q5VTH9 848 aa11.09□□□□□ -0.63
KDM4A-201ENST00000372396 OSBPL5Q9H0X9 879 aaPredicted RBP11.09□□□□□ -0.63
KDM4A-201ENST00000372396 DDX25Q9UHL0 483 aaKnown RBP11.09□□□□□ -0.63
KDM4A-201ENST00000372396 KIF28PB7ZC32 967 aa11.09□□□□□ -0.63
KDM4A-201ENST00000372396 MAFGO15525 162 aa11.09□□□□□ -0.63
KDM4A-201ENST00000372396 BUB1BO60566 1050 aaPredicted RBP11.09□□□□□ -0.63
KDM4A-201ENST00000372396 GDF11O95390 407 aa11.09□□□□□ -0.63
KDM4A-201ENST00000372396 CHRNA5P30532 468 aa11.09□□□□□ -0.63
KDM4A-201ENST00000372396 CYLC1P35663 651 aaPredicted RBP11.09□□□□□ -0.63
KDM4A-201ENST00000372396 MFSD4BQ5TF39 518 aa11.09□□□□□ -0.63
KDM4A-201ENST00000372396 TCERG1LQ5VWI1 586 aa11.09□□□□□ -0.63
KDM4A-201ENST00000372396 FMR1NBQ8N0W7 255 aaPredicted RBP11.09□□□□□ -0.63
KDM4A-201ENST00000372396 RASGRP4Q8TDF6 673 aa11.09□□□□□ -0.63
KDM4A-201ENST00000372396 SPZ1Q9BXG8 430 aa11.09□□□□□ -0.63
KDM4A-201ENST00000372396 LRP6O75581 1613 aa11.09□□□□□ -0.63
KDM4A-201ENST00000372396 GCOM1H8Y6P7 765 aaPredicted RBP11.08□□□□□ -0.64
KDM4A-201ENST00000372396 POLR2MP0CAP2 368 aa11.08□□□□□ -0.64
KDM4A-201ENST00000372396 ERCC5P28715 1186 aaPredicted RBP11.08□□□□□ -0.64
KDM4A-201ENST00000372396 ACTN3Q08043 901 aaPredicted RBP11.08□□□□□ -0.64
KDM4A-201ENST00000372396 CCDC174Q6PII3 467 aa11.08□□□□□ -0.64
KDM4A-201ENST00000372396 LRRC31Q6UY01 552 aa11.08□□□□□ -0.64
KDM4A-201ENST00000372396 KCTD1Q719H9 257 aa11.08□□□□□ -0.64
KDM4A-201ENST00000372396 SPATS2Q86XZ4 545 aaKnown RBP11.08□□□□□ -0.64
KDM4A-201ENST00000372396 POLLQ9UGP5 575 aa11.08□□□□□ -0.64
KDM4A-201ENST00000372396 LAMB4A4D0S4 1761 aa11.08□□□□□ -0.64
KDM4A-201ENST00000372396 TECP42680 631 aa11.08□□□□□ -0.64
KDM4A-201ENST00000372396 NCAPH2Q6IBW4 605 aa11.08□□□□□ -0.64
KDM4A-201ENST00000372396 CCDC121Q6ZUS5 278 aa11.08□□□□□ -0.64
KDM4A-201ENST00000372396 PTF1AQ7RTS3 328 aa11.08□□□□□ -0.64
KDM4A-201ENST00000372396 RNF168Q8IYW5 571 aaPredicted RBP11.08□□□□□ -0.64
KDM4A-201ENST00000372396 TBCKQ8TEA7 893 aa11.08□□□□□ -0.64
KDM4A-201ENST00000372396 NELFBQ8WX92 580 aa11.08□□□□□ -0.64
KDM4A-201ENST00000372396 CD248Q9HCU0 757 aa11.08□□□□□ -0.64
KDM4A-201ENST00000372396 PCDHA12Q9UN75 941 aa11.08□□□□□ -0.64
KDM4A-201ENST00000372396 DNM3Q9UQ16 869 aa11.08□□□□□ -0.64
KDM4A-201ENST00000372396 USP17L5A8MUK1 530 aa11.08□□□□□ -0.64
KDM4A-201ENST00000372396 AKR1B15C9JRZ8 316 aaPredicted RBP11.08□□□□□ -0.64
KDM4A-201ENST00000372396 TPD52L2O43399 206 aaKnown RBP11.08□□□□□ -0.64
KDM4A-201ENST00000372396 CHMP4BP1P59074 171 aa11.08□□□□□ -0.64
KDM4A-201ENST00000372396 SYDE2Q5VT97 1194 aa11.08□□□□□ -0.64
KDM4A-201ENST00000372396 HHATQ5VTY9 493 aa11.08□□□□□ -0.64
KDM4A-201ENST00000372396 TXNRD3Q86VQ6 643 aa11.08□□□□□ -0.64
KDM4A-201ENST00000372396 REXO1L1PQ8IX06 675 aa11.08□□□□□ -0.64
KDM4A-201ENST00000372396 EHBP1Q8NDI1 1231 aa11.08□□□□□ -0.64
KDM4A-201ENST00000372396 TRIM4Q9C037 500 aa11.08□□□□□ -0.64
KDM4A-201ENST00000372396 BLZF1Q9H2G9 400 aa11.08□□□□□ -0.64
KDM4A-201ENST00000372396 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.08□□□□□ -0.641e-6■■■■■ 90.5
KDM4A-201ENST00000372396 BARHL2Q9NY43 387 aa11.08□□□□□ -0.64
KDM4A-201ENST00000372396 PHLPP2Q6ZVD8 1323 aa11.08□□□□□ -0.64
KDM4A-201ENST00000372396 RPL13P26373 211 aaKnown RBP11.07□□□□□ -0.64
KDM4A-201ENST00000372396 PLS1Q14651 629 aa11.07□□□□□ -0.64
KDM4A-201ENST00000372396 TDRD12Q587J7 1177 aaKnown RBP11.07□□□□□ -0.64
KDM4A-201ENST00000372396 HS2ST1Q7LGA3 356 aa11.07□□□□□ -0.64
KDM4A-201ENST00000372396 MCF2L2Q86YR7 1114 aa11.07□□□□□ -0.64
KDM4A-201ENST00000372396 CSGALNACT2Q8N6G5 542 aa11.07□□□□□ -0.64
KDM4A-201ENST00000372396 TDRD3Q9H7E2 651 aaKnown RBP11.07□□□□□ -0.64
KDM4A-201ENST00000372396 L2HGDHQ9H9P8 463 aa11.07□□□□□ -0.64
KDM4A-201ENST00000372396 ATF5Q9Y2D1 282 aaPredicted RBP11.07□□□□□ -0.64
KDM4A-201ENST00000372396 RASA1P20936 1047 aa11.07□□□□□ -0.64
KDM4A-201ENST00000372396 HOXA7P31268 230 aaPredicted RBP11.07□□□□□ -0.64
KDM4A-201ENST00000372396 MATR3P43243 847 aaKnown RBP eCLIP11.07□□□□□ -0.641e-8■■□□□ 12.6
KDM4A-201ENST00000372396 KIF4BQ2VIQ3 1234 aa11.07□□□□□ -0.64
KDM4A-201ENST00000372396 FAM160B2Q86V87 743 aa11.07□□□□□ -0.64
KDM4A-201ENST00000372396 SRBD1Q8N5C6 995 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms