RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 GRK7Q8WTQ7 553 aa12.98□□□□□ -0.33
DEPDC1-201ENST00000370966 DYNLL2Q96FJ2 89 aa12.98□□□□□ -0.33
DEPDC1-201ENST00000370966 COA1Q9GZY4 146 aa12.98□□□□□ -0.33
DEPDC1-201ENST00000370966 CYP19A1P11511 503 aaPredicted RBP12.98□□□□□ -0.33
DEPDC1-201ENST00000370966 PLCG1P19174 1290 aa12.98□□□□□ -0.33
DEPDC1-201ENST00000370966 CFAP157Q5JU67 520 aa12.98□□□□□ -0.33
DEPDC1-201ENST00000370966 FOXP4Q8IVH2 680 aaPredicted RBP12.98□□□□□ -0.33
DEPDC1-201ENST00000370966 NACC1Q96RE7 527 aa12.98□□□□□ -0.33
DEPDC1-201ENST00000370966 GINS2Q9Y248 185 aa12.98□□□□□ -0.33
DEPDC1-201ENST00000370966 CSADQ9Y600 493 aa12.98□□□□□ -0.33
DEPDC1-201ENST00000370966 PLEKHA8P1O95397 391 aa12.98□□□□□ -0.33
DEPDC1-201ENST00000370966 AFPP02771 609 aaKnown RBP12.98□□□□□ -0.33
DEPDC1-201ENST00000370966 GUCY2FP51841 1108 aa12.98□□□□□ -0.33
DEPDC1-201ENST00000370966 FOXO4P98177 505 aa12.98□□□□□ -0.33
DEPDC1-201ENST00000370966 RASSF7Q02833 373 aa12.98□□□□□ -0.33
DEPDC1-201ENST00000370966 EHHADHQ08426 723 aa12.98□□□□□ -0.33
DEPDC1-201ENST00000370966 NARFQ9UHQ1 456 aa12.98□□□□□ -0.33
DEPDC1-201ENST00000370966 KRT19P08727 400 aa12.98□□□□□ -0.33
DEPDC1-201ENST00000370966 KRT15P19012 456 aa12.98□□□□□ -0.33
DEPDC1-201ENST00000370966 HHATQ5VTY9 493 aa12.98□□□□□ -0.33
DEPDC1-201ENST00000370966 PPFIBP2Q8ND30 876 aa12.98□□□□□ -0.33
DEPDC1-201ENST00000370966 CCDC110Q8TBZ0 833 aa12.98□□□□□ -0.33
DEPDC1-201ENST00000370966 P3H4Q92791 437 aa12.98□□□□□ -0.33
DEPDC1-201ENST00000370966 COA7Q96BR5 231 aa12.98□□□□□ -0.33
DEPDC1-201ENST00000370966 GJB4Q9NTQ9 266 aa12.98□□□□□ -0.33
DEPDC1-201ENST00000370966 MINPP1Q9UNW1 487 aa12.98□□□□□ -0.33
DEPDC1-201ENST00000370966 TNS3Q68CZ2 1445 aa12.97□□□□□ -0.33
DEPDC1-201ENST00000370966 PNMA6FA0A0J9YX94 578 aa12.97□□□□□ -0.33
DEPDC1-201ENST00000370966 PRPF6O94906 941 aaKnown RBP12.97□□□□□ -0.33
DEPDC1-201ENST00000370966 NDUFA10O95299 355 aa12.97□□□□□ -0.33
DEPDC1-201ENST00000370966 PFKFB3Q16875 520 aaPredicted RBP12.97□□□□□ -0.33
DEPDC1-201ENST00000370966 SLFNL1Q499Z3 407 aa12.97□□□□□ -0.33
DEPDC1-201ENST00000370966 KCTD1Q719H9 257 aa12.97□□□□□ -0.33
DEPDC1-201ENST00000370966 FAM186BQ8IYM0 893 aa12.97□□□□□ -0.33
DEPDC1-201ENST00000370966 GABPB2Q8TAK5 448 aaPredicted RBP12.97□□□□□ -0.33
DEPDC1-201ENST00000370966 LY9Q9HBG7 655 aa12.97□□□□□ -0.33
DEPDC1-201ENST00000370966 JRKLQ9Y4A0 524 aa12.97□□□□□ -0.33
DEPDC1-201ENST00000370966 USP17L3A6NCW0 530 aa12.97□□□□□ -0.33
DEPDC1-201ENST00000370966 USP17L4A6NCW7 530 aa12.97□□□□□ -0.33
DEPDC1-201ENST00000370966 NBPF26B4DH59 902 aa12.97□□□□□ -0.33
DEPDC1-201ENST00000370966 NBPF10Q6P3W6 841 aaKnown RBP12.97□□□□□ -0.33
DEPDC1-201ENST00000370966 CYB5R4Q7L1T6 521 aa12.97□□□□□ -0.33
DEPDC1-201ENST00000370966 USP17L1Q7RTZ2 530 aa12.97□□□□□ -0.33
DEPDC1-201ENST00000370966 NBPF15Q8N660 670 aa12.97□□□□□ -0.33
DEPDC1-201ENST00000370966 ATP6V0A1Q93050 837 aa12.97□□□□□ -0.33
DEPDC1-201ENST00000370966 CCDC127Q96BQ5 260 aa12.97□□□□□ -0.33
DEPDC1-201ENST00000370966 MIS12Q9H081 205 aa12.97□□□□□ -0.33
DEPDC1-201ENST00000370966 MLXIPQ9HAP2 919 aa12.97□□□□□ -0.33
DEPDC1-201ENST00000370966 OVOS2A0A0J9YW53 1432 aa12.97□□□□□ -0.33
DEPDC1-201ENST00000370966 OVOS2Q6IE36 1432 aa12.97□□□□□ -0.33
DEPDC1-201ENST00000370966 PXDNLA1KZ92 1463 aa12.97□□□□□ -0.33
DEPDC1-201ENST00000370966 EMILIN3Q9NT22 766 aa12.97□□□□□ -0.33
DEPDC1-201ENST00000370966 CEP152O94986 1710 aa12.96□□□□□ -0.33
DEPDC1-201ENST00000370966 GOLGA8FQ08AF8 430 aa12.96□□□□□ -0.33
DEPDC1-201ENST00000370966 GOLGA8DPQ0D2H9 430 aa12.96□□□□□ -0.33
DEPDC1-201ENST00000370966 SEMA3FQ13275 785 aa12.96□□□□□ -0.33
DEPDC1-201ENST00000370966 KMT5BQ4FZB7 885 aa12.96□□□□□ -0.33
DEPDC1-201ENST00000370966 PPP4R3CPQ6ZMV5 832 aa12.96□□□□□ -0.33
DEPDC1-201ENST00000370966 VSIG1Q86XK7 387 aa12.96□□□□□ -0.33
DEPDC1-201ENST00000370966 SPATS2Q86XZ4 545 aaKnown RBP12.96□□□□□ -0.33
DEPDC1-201ENST00000370966 PLA2G12BQ9BX93 195 aa12.96□□□□□ -0.33
DEPDC1-201ENST00000370966 OSBPL5Q9H0X9 879 aaPredicted RBP12.96□□□□□ -0.33
DEPDC1-201ENST00000370966 NEDD4P46934 1319 aa12.96□□□□□ -0.33
DEPDC1-201ENST00000370966 SETD1BQ9UPS6 1966 aaKnown RBP12.96□□□□□ -0.33
DEPDC1-201ENST00000370966 POLR2BP30876 1174 aaKnown RBP12.96□□□□□ -0.33
DEPDC1-201ENST00000370966 KRT31Q15323 416 aa12.96□□□□□ -0.33
DEPDC1-201ENST00000370966 TCP11X2Q5H9J9 407 aa12.96□□□□□ -0.33
DEPDC1-201ENST00000370966 C10orf76Q5T2E6 689 aa12.96□□□□□ -0.33
DEPDC1-201ENST00000370966 CCDC89Q8N998 374 aa12.96□□□□□ -0.33
DEPDC1-201ENST00000370966 FAM81BQ96LP2 452 aa12.96□□□□□ -0.33
DEPDC1-201ENST00000370966 RUNDC3BQ96NL0 473 aa12.96□□□□□ -0.33
DEPDC1-201ENST00000370966 ZNF577Q9BSK1 485 aa12.96□□□□□ -0.33
DEPDC1-201ENST00000370966 NDST4Q9H3R1 872 aa12.96□□□□□ -0.33
DEPDC1-201ENST00000370966 TYW1Q9NV66 732 aaKnown RBP12.96□□□□□ -0.33
DEPDC1-201ENST00000370966 ENAHQ8N8S7 591 aaPredicted RBP12.96□□□□□ -0.33
DEPDC1-201ENST00000370966 NT5C1BQ96P26 610 aa12.96□□□□□ -0.33
DEPDC1-201ENST00000370966 SRP68Q9UHB9 627 aaKnown RBP12.96□□□□□ -0.33
DEPDC1-201ENST00000370966 ENC1O14682 589 aa12.96□□□□□ -0.34
DEPDC1-201ENST00000370966 DAPK3O43293 454 aa12.96□□□□□ -0.34
DEPDC1-201ENST00000370966 MFAP3LO75121 409 aa12.96□□□□□ -0.34
DEPDC1-201ENST00000370966 COBLO75128 1261 aa12.96□□□□□ -0.34
DEPDC1-201ENST00000370966 SLC16A2P36021 539 aa12.96□□□□□ -0.34
DEPDC1-201ENST00000370966 ARL1P40616 181 aaPredicted RBP12.96□□□□□ -0.34
DEPDC1-201ENST00000370966 PTK2Q05397 1052 aa12.96□□□□□ -0.34
DEPDC1-201ENST00000370966 ITIH3Q06033 890 aa12.96□□□□□ -0.34
DEPDC1-201ENST00000370966 ORC2Q13416 577 aaPredicted RBP12.96□□□□□ -0.34
DEPDC1-201ENST00000370966 PPP2R5AQ15172 486 aa12.96□□□□□ -0.34
DEPDC1-201ENST00000370966 LRRC41Q15345 812 aa12.96□□□□□ -0.34
DEPDC1-201ENST00000370966 HADHQ16836 314 aaKnown RBP12.96□□□□□ -0.34
DEPDC1-201ENST00000370966 BBOF1Q8ND07 529 aa12.96□□□□□ -0.34
DEPDC1-201ENST00000370966 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.96□□□□□ -0.34
DEPDC1-201ENST00000370966 TMEM206Q9H813 350 aa12.96□□□□□ -0.34
DEPDC1-201ENST00000370966 NRBP2Q9NSY0 501 aa12.96□□□□□ -0.34
DEPDC1-201ENST00000370966 RNF40O75150 1001 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 MFAP3P55082 362 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 GNGT1P63211 74 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 MYL7Q01449 175 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 EXOSC10Q01780 885 aaKnown RBP12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 GUCY2DQ02846 1103 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 MAP7D1Q3KQU3 841 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms