RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 ADGRF4Q8IZF3 695 aa17.64■□□□□ 0.41
SS18L1-202ENST00000370848 CLEC4DQ8WXI8 215 aa17.64■□□□□ 0.41
SS18L1-202ENST00000370848 FAM161BQ96MY7 647 aa17.64■□□□□ 0.41
SS18L1-202ENST00000370848 VAT1LQ9HCJ6 419 aa17.64■□□□□ 0.41
SS18L1-202ENST00000370848 ADD3Q9UEY8 706 aaKnown RBP17.64■□□□□ 0.41
SS18L1-202ENST00000370848 SCN10AQ9Y5Y9 1956 aa17.64■□□□□ 0.41
SS18L1-202ENST00000370848 PALM3A6NDB9 673 aaPredicted RBP17.63■□□□□ 0.41
SS18L1-202ENST00000370848 RXRAP19793 462 aa17.63■□□□□ 0.41
SS18L1-202ENST00000370848 DNAJB2P25686 324 aa17.63■□□□□ 0.41
SS18L1-202ENST00000370848 ALDH5A1P51649 535 aaPredicted RBP17.63■□□□□ 0.41
SS18L1-202ENST00000370848 BEX3Q00994 111 aa17.63■□□□□ 0.41
SS18L1-202ENST00000370848 EXOSC10Q01780 885 aaKnown RBP17.63■□□□□ 0.41
SS18L1-202ENST00000370848 CDC37Q16543 378 aaPredicted RBP17.63■□□□□ 0.41
SS18L1-202ENST00000370848 DUSP28Q4G0W2 176 aa17.63■□□□□ 0.41
SS18L1-202ENST00000370848 PSRC1Q6PGN9 363 aaPredicted RBP17.63■□□□□ 0.41
SS18L1-202ENST00000370848 NFXL1Q6ZNB6 911 aa17.63■□□□□ 0.41
SS18L1-202ENST00000370848 ZNF654Q8IZM8 581 aa17.63■□□□□ 0.41
SS18L1-202ENST00000370848 TMEM199Q8N511 208 aa17.63■□□□□ 0.41
SS18L1-202ENST00000370848 TMEM87BQ96K49 555 aa17.63■□□□□ 0.41
SS18L1-202ENST00000370848 JAKMIP1Q96N16 626 aaKnown RBP17.63■□□□□ 0.41
SS18L1-202ENST00000370848 USP26Q9BXU7 913 aa17.63■□□□□ 0.41
SS18L1-202ENST00000370848 JMJD4Q9H9V9 463 aa17.63■□□□□ 0.41
SS18L1-202ENST00000370848 PDGFCQ9NRA1 345 aa17.63■□□□□ 0.41
SS18L1-202ENST00000370848 KLRF2D3W0D1 207 aa17.62■□□□□ 0.41
SS18L1-202ENST00000370848 NFIBO00712 420 aa17.62■□□□□ 0.41
SS18L1-202ENST00000370848 DHX16O60231 1041 aaKnown RBP17.62■□□□□ 0.41
SS18L1-202ENST00000370848 ITGA7Q13683 1181 aa17.62■□□□□ 0.41
SS18L1-202ENST00000370848 QRICH1Q2TAL8 776 aa17.62■□□□□ 0.41
SS18L1-202ENST00000370848 CXCL17Q6UXB2 119 aa17.62■□□□□ 0.41
SS18L1-202ENST00000370848 CATIPQ7Z7H3 387 aa17.62■□□□□ 0.41
SS18L1-202ENST00000370848 FBXO16Q8IX29 292 aaPredicted RBP17.62■□□□□ 0.41
SS18L1-202ENST00000370848 RGS22Q8NE09 1264 aa17.62■□□□□ 0.41
SS18L1-202ENST00000370848 MAFAQ8NHW3 353 aaPredicted RBP17.62■□□□□ 0.41
SS18L1-202ENST00000370848 CCDC69A6NI79 296 aa17.61■□□□□ 0.41
SS18L1-202ENST00000370848 ZEB2O60315 1214 aa17.61■□□□□ 0.41
SS18L1-202ENST00000370848 CSF2RAP15509 400 aa17.61■□□□□ 0.41
SS18L1-202ENST00000370848 BAATQ14032 418 aaPredicted RBP17.61■□□□□ 0.41
SS18L1-202ENST00000370848 KRT32Q14532 448 aa17.61■□□□□ 0.41
SS18L1-202ENST00000370848 USH1GQ495M9 461 aa17.61■□□□□ 0.41
SS18L1-202ENST00000370848 NSMFQ6X4W1 530 aa17.61■□□□□ 0.41
SS18L1-202ENST00000370848 DHX32Q7L7V1 743 aaKnown RBP17.61■□□□□ 0.41
SS18L1-202ENST00000370848 DNERQ8NFT8 737 aa17.61■□□□□ 0.41
SS18L1-202ENST00000370848 MYLIPQ8WY64 445 aa17.61■□□□□ 0.41
SS18L1-202ENST00000370848 HERVK_113Q902F9 699 aa17.61■□□□□ 0.41
SS18L1-202ENST00000370848 PURBQ96QR8 312 aaKnown RBP17.61■□□□□ 0.41
SS18L1-202ENST00000370848 MTA3Q9BTC8 594 aa17.61■□□□□ 0.41
SS18L1-202ENST00000370848 COL25A1Q9BXS0 654 aaPredicted RBP17.61■□□□□ 0.41
SS18L1-202ENST00000370848 AP5M1Q9H0R1 490 aa17.61■□□□□ 0.41
SS18L1-202ENST00000370848 IL23AQ9NPF7 189 aa17.61■□□□□ 0.41
SS18L1-202ENST00000370848 TRANK1O15050 2925 aa17.61■□□□□ 0.41
SS18L1-202ENST00000370848 CYTH3O43739 400 aa17.6■□□□□ 0.41
SS18L1-202ENST00000370848 DDAH1O94760 285 aa17.6■□□□□ 0.41
SS18L1-202ENST00000370848 LIFRP42702 1097 aa17.6■□□□□ 0.41
SS18L1-202ENST00000370848 TMEM63BQ5T3F8 832 aa17.6■□□□□ 0.41
SS18L1-202ENST00000370848 NOC4LQ9BVI4 516 aaKnown RBP17.6■□□□□ 0.41
SS18L1-202ENST00000370848 BRPF3Q9ULD4 1205 aa17.6■□□□□ 0.41
SS18L1-202ENST00000370848 DDX49Q9Y6V7 483 aaKnown RBP17.6■□□□□ 0.41
SS18L1-202ENST00000370848 NKRFO15226 690 aaKnown RBP eCLIP17.59■□□□□ 0.41
SS18L1-202ENST00000370848 DYNC1LI2O43237 492 aaPredicted RBP17.59■□□□□ 0.41
SS18L1-202ENST00000370848 PPP1R11O60927 126 aaPredicted RBP17.59■□□□□ 0.41
SS18L1-202ENST00000370848 PLEKHA8P1O95397 391 aa17.59■□□□□ 0.41
SS18L1-202ENST00000370848 SEC24BO95487 1268 aa17.59■□□□□ 0.41
SS18L1-202ENST00000370848 SLC30A10Q6XR72 485 aa17.59■□□□□ 0.41
SS18L1-202ENST00000370848 HOMER1Q86YM7 354 aa17.59■□□□□ 0.41
SS18L1-202ENST00000370848 PIBF1Q8WXW3 757 aa17.59■□□□□ 0.41
SS18L1-202ENST00000370848 VWCEQ96DN2 955 aa17.59■□□□□ 0.41
SS18L1-202ENST00000370848 TANC1Q9C0D5 1861 aa17.58■□□□□ 0.41
SS18L1-202ENST00000370848 TTC28Q96AY4 2481 aa17.58■□□□□ 0.41
SS18L1-202ENST00000370848 B4GALT4O60513 344 aa17.58■□□□□ 0.4
SS18L1-202ENST00000370848 FOSL2P15408 326 aa17.58■□□□□ 0.4
SS18L1-202ENST00000370848 PTGS1P23219 599 aa17.58■□□□□ 0.4
SS18L1-202ENST00000370848 RPS6P62753 249 aaKnown RBP17.58■□□□□ 0.4
SS18L1-202ENST00000370848 PURAQ00577 322 aaKnown RBP17.58■□□□□ 0.4
SS18L1-202ENST00000370848 GRIN2CQ14957 1233 aa17.58■□□□□ 0.4
SS18L1-202ENST00000370848 RNF207Q6ZRF8 634 aa17.58■□□□□ 0.4
SS18L1-202ENST00000370848 ZNF365Q70YC5 407 aa17.58■□□□□ 0.4
SS18L1-202ENST00000370848 SGMS1Q86VZ5 419 aa17.58■□□□□ 0.4
SS18L1-202ENST00000370848 MICU3Q86XE3 530 aa17.58■□□□□ 0.4
SS18L1-202ENST00000370848 CMTR1Q8N1G2 835 aaKnown RBP17.58■□□□□ 0.4
SS18L1-202ENST00000370848 VTI1AQ96AJ9 217 aa17.58■□□□□ 0.4
SS18L1-202ENST00000370848 TIFAQ96CG3 184 aa17.58■□□□□ 0.4
SS18L1-202ENST00000370848 MTMR8Q96EF0 704 aa17.58■□□□□ 0.4
SS18L1-202ENST00000370848 PIGSQ96S52 555 aa17.58■□□□□ 0.4
SS18L1-202ENST00000370848 PBX4Q9BYU1 374 aa17.58■□□□□ 0.4
SS18L1-202ENST00000370848 WNT8AQ9H1J5 351 aa17.58■□□□□ 0.4
SS18L1-202ENST00000370848 HIPK3Q9H422 1215 aa17.58■□□□□ 0.4
SS18L1-202ENST00000370848 ZNF576Q9H609 170 aa17.58■□□□□ 0.4
SS18L1-202ENST00000370848 POLR3EQ9NVU0 708 aa17.58■□□□□ 0.4
SS18L1-202ENST00000370848 SLC12A7Q9Y666 1083 aa17.58■□□□□ 0.4
SS18L1-202ENST00000370848 GBF1Q92538 1859 aa17.57■□□□□ 0.4
SS18L1-202ENST00000370848 A6NJR5 290 aa17.57■□□□□ 0.4
SS18L1-202ENST00000370848 EPB41L2O43491 1005 aaKnown RBP17.57■□□□□ 0.4
SS18L1-202ENST00000370848 CASTP20810 708 aaKnown RBP17.57■□□□□ 0.4
SS18L1-202ENST00000370848 RPS6KB1P23443 525 aa17.57■□□□□ 0.4
SS18L1-202ENST00000370848 CYP2C18P33260 490 aa17.57■□□□□ 0.4
SS18L1-202ENST00000370848 CPT1AP50416 773 aa17.57■□□□□ 0.4
SS18L1-202ENST00000370848 GHRHRQ02643 423 aa17.57■□□□□ 0.4
SS18L1-202ENST00000370848 BLOC1S2Q6QNY1 142 aa17.57■□□□□ 0.4
SS18L1-202ENST00000370848 NOL8Q76FK4 1167 aaKnown RBP17.57■□□□□ 0.4
SS18L1-202ENST00000370848 EEPD1Q7L9B9 569 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 210.5 ms