RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 IFNL3Q8IZI9 196 aa13.82□□□□□ -0.2
GPC4-201ENST00000370828 CEP70Q8NHQ1 597 aa13.82□□□□□ -0.2
GPC4-201ENST00000370828 LRRC1Q9BTT6 524 aa13.82□□□□□ -0.2
GPC4-201ENST00000370828 GDAQ9Y2T3 454 aa13.82□□□□□ -0.2
GPC4-201ENST00000370828 FANCAO15360 1455 aa13.82□□□□□ -0.2
GPC4-201ENST00000370828 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.82□□□□□ -0.2
GPC4-201ENST00000370828 ANO9A1A5B4 782 aa13.82□□□□□ -0.2
GPC4-201ENST00000370828 RASSF10A6NK89 507 aa13.82□□□□□ -0.2
GPC4-201ENST00000370828 ZNF185O15231 689 aa13.82□□□□□ -0.2
GPC4-201ENST00000370828 TRPA1O75762 1119 aa13.82□□□□□ -0.2
GPC4-201ENST00000370828 HLA-DOAP06340 250 aa13.82□□□□□ -0.2
GPC4-201ENST00000370828 CUL1Q13616 776 aa13.82□□□□□ -0.2
GPC4-201ENST00000370828 TMED2Q15363 201 aa13.82□□□□□ -0.2
GPC4-201ENST00000370828 MAP3K21Q5TCX8 1036 aa13.82□□□□□ -0.2
GPC4-201ENST00000370828 PALM2Q8IXS6 379 aa13.82□□□□□ -0.2
GPC4-201ENST00000370828 FAM133AQ8N9E0 248 aa13.82□□□□□ -0.2
GPC4-201ENST00000370828 PRR29P0C7W0 189 aa13.82□□□□□ -0.2
GPC4-201ENST00000370828 PDE6CP51160 858 aa13.82□□□□□ -0.2
GPC4-201ENST00000370828 MRPL12P52815 198 aaKnown RBP13.82□□□□□ -0.2
GPC4-201ENST00000370828 GSTO1P78417 241 aa13.82□□□□□ -0.2
GPC4-201ENST00000370828 GLE1Q53GS7 698 aaKnown RBP13.82□□□□□ -0.2
GPC4-201ENST00000370828 MAEAQ7L5Y9 396 aa13.82□□□□□ -0.2
GPC4-201ENST00000370828 WDR75Q8IWA0 830 aaKnown RBP13.82□□□□□ -0.2
GPC4-201ENST00000370828 GPKOWQ92917 476 aaPredicted RBP eCLIP13.82□□□□□ -0.2
GPC4-201ENST00000370828 DNAJC17Q9NVM6 304 aaKnown RBP13.82□□□□□ -0.2
GPC4-201ENST00000370828 TMOD2Q9NZR1 351 aa13.82□□□□□ -0.2
GPC4-201ENST00000370828 SRPRBQ9Y5M8 271 aaKnown RBP13.82□□□□□ -0.2
GPC4-201ENST00000370828 EDC4Q6P2E9 1401 aaKnown RBP13.82□□□□□ -0.2
GPC4-201ENST00000370828 YTHDC2Q9H6S0 1430 aaKnown RBP13.82□□□□□ -0.2
GPC4-201ENST00000370828 BCORL1Q5H9F3 1711 aa13.82□□□□□ -0.2
GPC4-201ENST00000370828 RAD23BP54727 409 aa13.82□□□□□ -0.2
GPC4-201ENST00000370828 NAIF1Q69YI7 327 aaPredicted RBP13.82□□□□□ -0.2
GPC4-201ENST00000370828 DHTKD1Q96HY7 919 aaPredicted RBP13.82□□□□□ -0.2
GPC4-201ENST00000370828 SNUPNO95149 360 aaKnown RBP13.81□□□□□ -0.2
GPC4-201ENST00000370828 LONP1P36776 959 aaKnown RBP13.81□□□□□ -0.2
GPC4-201ENST00000370828 ADAM9Q13443 819 aa13.81□□□□□ -0.2
GPC4-201ENST00000370828 MESDQ14696 234 aa13.81□□□□□ -0.2
GPC4-201ENST00000370828 LRRC24Q50LG9 513 aa13.81□□□□□ -0.2
GPC4-201ENST00000370828 LIN9Q5TKA1 542 aa13.81□□□□□ -0.2
GPC4-201ENST00000370828 LRRN4CLQ8ND94 238 aa13.81□□□□□ -0.2
GPC4-201ENST00000370828 SLC40A1Q9NP59 571 aa13.81□□□□□ -0.2
GPC4-201ENST00000370828 PALMDQ9NP74 551 aa13.81□□□□□ -0.2
GPC4-201ENST00000370828 ERVK-7P63135 1459 aa13.81□□□□□ -0.2
GPC4-201ENST00000370828 M0R2C6 588 aa13.81□□□□□ -0.2
GPC4-201ENST00000370828 MMP1P03956 469 aa13.81□□□□□ -0.2
GPC4-201ENST00000370828 MDH1P40925 334 aaKnown RBP13.81□□□□□ -0.2
GPC4-201ENST00000370828 PPARAQ07869 468 aa13.81□□□□□ -0.2
GPC4-201ENST00000370828 LRRC41Q15345 812 aa13.81□□□□□ -0.2
GPC4-201ENST00000370828 LGSNQ5TDP6 509 aa13.81□□□□□ -0.2
GPC4-201ENST00000370828 HAUS3Q68CZ6 603 aa13.81□□□□□ -0.2
GPC4-201ENST00000370828 ANKRD35Q8N283 1001 aa13.81□□□□□ -0.2
GPC4-201ENST00000370828 MAIP1Q8WWC4 291 aa13.81□□□□□ -0.2
GPC4-201ENST00000370828 PNKPQ96T60 521 aa13.81□□□□□ -0.2
GPC4-201ENST00000370828 CENPKQ9BS16 269 aa13.81□□□□□ -0.2
GPC4-201ENST00000370828 ADAMTS1Q9UHI8 967 aa13.81□□□□□ -0.2
GPC4-201ENST00000370828 SAP30BPQ9UHR5 308 aaKnown RBP13.81□□□□□ -0.2
GPC4-201ENST00000370828 WDR91A4D1P6 747 aa13.81□□□□□ -0.2
GPC4-201ENST00000370828 KRT28Q7Z3Y7 464 aa13.81□□□□□ -0.2
GPC4-201ENST00000370828 CHMP6Q96FZ7 201 aa13.81□□□□□ -0.2
GPC4-201ENST00000370828 ECT2Q9H8V3 914 aa13.81□□□□□ -0.2
GPC4-201ENST00000370828 ETNK1Q9HBU6 452 aa13.81□□□□□ -0.2
GPC4-201ENST00000370828 TYW1Q9NV66 732 aaKnown RBP13.81□□□□□ -0.2
GPC4-201ENST00000370828 BIN2Q9UBW5 565 aaPredicted RBP13.81□□□□□ -0.2
GPC4-201ENST00000370828 WDR62O43379 1518 aa13.81□□□□□ -0.2
GPC4-201ENST00000370828 F8W031 263 aaPredicted RBP13.81□□□□□ -0.2
GPC4-201ENST00000370828 PALMO75781 387 aa13.81□□□□□ -0.2
GPC4-201ENST00000370828 SNX1Q13596 522 aa13.81□□□□□ -0.2
GPC4-201ENST00000370828 PUM3Q15397 648 aaKnown RBP13.81□□□□□ -0.2
GPC4-201ENST00000370828 MAN2A1Q16706 1144 aa13.81□□□□□ -0.2
GPC4-201ENST00000370828 MYCT1Q8N699 235 aa13.81□□□□□ -0.2
GPC4-201ENST00000370828 PIP4K2CQ8TBX8 421 aa13.81□□□□□ -0.2
GPC4-201ENST00000370828 PBKQ96KB5 322 aa13.81□□□□□ -0.2
GPC4-201ENST00000370828 KDM5AP29375 1690 aaKnown RBP13.81□□□□□ -0.2
GPC4-201ENST00000370828 FMNL1O95466 1100 aaPredicted RBP13.8□□□□□ -0.2
GPC4-201ENST00000370828 ACSL3O95573 720 aa13.8□□□□□ -0.2
GPC4-201ENST00000370828 MX2P20592 715 aa13.8□□□□□ -0.2
GPC4-201ENST00000370828 EIF6P56537 245 aaKnown RBP13.8□□□□□ -0.2
GPC4-201ENST00000370828 PITPNM3Q9BZ71 974 aa13.8□□□□□ -0.2
GPC4-201ENST00000370828 TTC26A0AVF1 554 aa13.8□□□□□ -0.2
GPC4-201ENST00000370828 LSP1P33241 339 aa13.8□□□□□ -0.2
GPC4-201ENST00000370828 C6orf118Q5T5N4 469 aa13.8□□□□□ -0.2
GPC4-201ENST00000370828 ST13P4Q8IZP2 240 aaPredicted RBP13.8□□□□□ -0.2
GPC4-201ENST00000370828 SPATA4Q8NEY3 305 aa13.8□□□□□ -0.2
GPC4-201ENST00000370828 PKD2L1Q9P0L9 805 aa13.8□□□□□ -0.2
GPC4-201ENST00000370828 G3BP2Q9UN86 482 aaKnown RBP13.8□□□□□ -0.2
GPC4-201ENST00000370828 SLC4A7Q9Y6M7 1214 aa13.8□□□□□ -0.2
GPC4-201ENST00000370828 TARSL2A2RTX5 802 aaKnown RBP13.8□□□□□ -0.2
GPC4-201ENST00000370828 TRIM49BA6NDI0 452 aa13.8□□□□□ -0.2
GPC4-201ENST00000370828 KRT14P02533 472 aa13.8□□□□□ -0.2
GPC4-201ENST00000370828 PDE6AP16499 860 aa13.8□□□□□ -0.2
GPC4-201ENST00000370828 STRN3Q13033 797 aa13.8□□□□□ -0.2
GPC4-201ENST00000370828 CCNI2Q6ZMN8 369 aaPredicted RBP13.8□□□□□ -0.2
GPC4-201ENST00000370828 GPBP1Q86WP2 473 aa13.8□□□□□ -0.2
GPC4-201ENST00000370828 RIC8AQ9NPQ8 531 aa13.8□□□□□ -0.2
GPC4-201ENST00000370828 OR52Z1P0C646 297 aa13.8□□□□□ -0.2
GPC4-201ENST00000370828 SCG2P13521 617 aa13.8□□□□□ -0.2
GPC4-201ENST00000370828 TPP2P29144 1249 aaPredicted RBP13.8□□□□□ -0.2
GPC4-201ENST00000370828 EXOC3L4Q17RC7 722 aa13.8□□□□□ -0.2
GPC4-201ENST00000370828 FAM26FQ5R3K3 315 aa13.8□□□□□ -0.2
GPC4-201ENST00000370828 CCDC89Q8N998 374 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms