RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 CHUKO15111 745 aa17.38■□□□□ 0.37
COL17A1-202ENST00000369733 PRPF3O43395 683 aaKnown RBP17.38■□□□□ 0.37
COL17A1-202ENST00000369733 ALDH8A1Q9H2A2 487 aaPredicted RBP17.38■□□□□ 0.37
COL17A1-202ENST00000369733 COL4A3BPQ9Y5P4 624 aa17.38■□□□□ 0.37
COL17A1-202ENST00000369733 EVI5O60447 810 aa17.37■□□□□ 0.37
COL17A1-202ENST00000369733 SLCO1A2P46721 670 aa17.37■□□□□ 0.37
COL17A1-202ENST00000369733 GLE1Q53GS7 698 aaKnown RBP17.37■□□□□ 0.37
COL17A1-202ENST00000369733 SH2D4AQ9H788 454 aa17.37■□□□□ 0.37
COL17A1-202ENST00000369733 PDE6CP51160 858 aa17.37■□□□□ 0.37
COL17A1-202ENST00000369733 FKBP3Q00688 224 aaKnown RBP17.37■□□□□ 0.37
COL17A1-202ENST00000369733 CUL1Q13616 776 aa17.37■□□□□ 0.37
COL17A1-202ENST00000369733 IQCB1Q15051 598 aa17.37■□□□□ 0.37
COL17A1-202ENST00000369733 GJA10Q969M2 543 aa17.37■□□□□ 0.37
COL17A1-202ENST00000369733 AP1M1Q9BXS5 423 aa17.37■□□□□ 0.37
COL17A1-202ENST00000369733 NDST4Q9H3R1 872 aa17.37■□□□□ 0.37
COL17A1-202ENST00000369733 ARHGEF10LQ9HCE6 1279 aa17.37■□□□□ 0.37
COL17A1-202ENST00000369733 KIAA1024Q9UPX6 916 aa17.37■□□□□ 0.37
COL17A1-202ENST00000369733 PRKAB2O43741 272 aa17.37■□□□□ 0.37
COL17A1-202ENST00000369733 PPP2R5AQ15172 486 aa17.37■□□□□ 0.37
COL17A1-202ENST00000369733 TAF11Q15544 211 aa17.37■□□□□ 0.37
COL17A1-202ENST00000369733 CASC4Q6P4E1 433 aa17.37■□□□□ 0.37
COL17A1-202ENST00000369733 SPZ1Q9BXG8 430 aa17.37■□□□□ 0.37
COL17A1-202ENST00000369733 AFPP02771 609 aaKnown RBP17.37■□□□□ 0.37
COL17A1-202ENST00000369733 ADCY1Q08828 1119 aa17.37■□□□□ 0.37
COL17A1-202ENST00000369733 TTLL12Q14166 644 aaPredicted RBP17.37■□□□□ 0.37
COL17A1-202ENST00000369733 LARSQ9P2J5 1176 aaKnown RBP17.37■□□□□ 0.37
COL17A1-202ENST00000369733 ANO9A1A5B4 782 aa17.37■□□□□ 0.37
COL17A1-202ENST00000369733 GNPATO15228 680 aa17.37■□□□□ 0.37
COL17A1-202ENST00000369733 GAS7O60861 476 aa17.37■□□□□ 0.37
COL17A1-202ENST00000369733 DDIT3P35638 169 aa17.37■□□□□ 0.37
COL17A1-202ENST00000369733 MAP3K21Q5TCX8 1036 aa17.37■□□□□ 0.37
COL17A1-202ENST00000369733 SRLQ86TD4 932 aa17.37■□□□□ 0.37
COL17A1-202ENST00000369733 CNBD1Q8NA66 436 aa17.37■□□□□ 0.37
COL17A1-202ENST00000369733 NEK9Q8TD19 979 aa17.37■□□□□ 0.37
COL17A1-202ENST00000369733 LAMC1P11047 1609 aa17.37■□□□□ 0.37
COL17A1-202ENST00000369733 GMNNO75496 209 aa17.36■□□□□ 0.37
COL17A1-202ENST00000369733 STK10O94804 968 aaKnown RBP17.36■□□□□ 0.37
COL17A1-202ENST00000369733 EIF3BP55884 814 aaKnown RBP17.36■□□□□ 0.37
COL17A1-202ENST00000369733 GEN1Q17RS7 908 aa17.36■□□□□ 0.37
COL17A1-202ENST00000369733 GDAQ9Y2T3 454 aa17.36■□□□□ 0.37
COL17A1-202ENST00000369733 TMEM2Q9UHN6 1383 aa17.36■□□□□ 0.37
COL17A1-202ENST00000369733 POC1B-GALNT4F8VUJ3 575 aa17.36■□□□□ 0.37
COL17A1-202ENST00000369733 PRR29P0C7W0 189 aa17.36■□□□□ 0.37
COL17A1-202ENST00000369733 CUL4BQ13620 913 aa17.36■□□□□ 0.37
COL17A1-202ENST00000369733 ATF7P17544 494 aaPredicted RBP17.36■□□□□ 0.37
COL17A1-202ENST00000369733 FAM178BQ8IXR5 827 aa17.36■□□□□ 0.37
COL17A1-202ENST00000369733 ZNF710Q8N1W2 664 aa17.36■□□□□ 0.37
COL17A1-202ENST00000369733 ZNF579Q8NAF0 562 aaKnown RBP17.36■□□□□ 0.37
COL17A1-202ENST00000369733 ATP2A3Q93084 1043 aa17.36■□□□□ 0.37
COL17A1-202ENST00000369733 ATG3Q9NT62 314 aa17.36■□□□□ 0.37
COL17A1-202ENST00000369733 BCAP29Q9UHQ4 241 aa17.36■□□□□ 0.37
COL17A1-202ENST00000369733 CASP1P29466 404 aa17.36■□□□□ 0.37
COL17A1-202ENST00000369733 SH2D4BQ5SQS7 431 aa17.36■□□□□ 0.37
COL17A1-202ENST00000369733 FMO2Q99518 471 aa17.36■□□□□ 0.37
COL17A1-202ENST00000369733 BTG4Q9NY30 223 aa17.36■□□□□ 0.37
COL17A1-202ENST00000369733 TNNI1P19237 187 aa17.35■□□□□ 0.37
COL17A1-202ENST00000369733 USP14P54578 494 aa17.35■□□□□ 0.37
COL17A1-202ENST00000369733 CHRNDQ07001 517 aa17.35■□□□□ 0.37
COL17A1-202ENST00000369733 C10orf76Q5T2E6 689 aa17.35■□□□□ 0.37
COL17A1-202ENST00000369733 RBM26Q5T8P6 1007 aaKnown RBP17.35■□□□□ 0.37
COL17A1-202ENST00000369733 ARHGEF18Q6ZSZ5 1173 aa17.35■□□□□ 0.37
COL17A1-202ENST00000369733 TBC1D1Q86TI0 1168 aaPredicted RBP17.35■□□□□ 0.37
COL17A1-202ENST00000369733 METP08581 1390 aa17.35■□□□□ 0.37
COL17A1-202ENST00000369733 CD19P15391 556 aa17.35■□□□□ 0.37
COL17A1-202ENST00000369733 PPM1KQ8N3J5 372 aa17.35■□□□□ 0.37
COL17A1-202ENST00000369733 LCORLQ8N3X6 602 aa17.35■□□□□ 0.37
COL17A1-202ENST00000369733 LGALS16A8MUM7 142 aa17.35■□□□□ 0.37
COL17A1-202ENST00000369733 TEX33O43247 280 aa17.35■□□□□ 0.37
COL17A1-202ENST00000369733 MYCLP12524 364 aaPredicted RBP17.35■□□□□ 0.37
COL17A1-202ENST00000369733 PLCG1P19174 1290 aa17.35■□□□□ 0.37
COL17A1-202ENST00000369733 USP6P35125 1406 aa17.35■□□□□ 0.37
COL17A1-202ENST00000369733 KCNJ6P48051 423 aa17.35■□□□□ 0.37
COL17A1-202ENST00000369733 TXLNGQ9NUQ3 528 aa17.35■□□□□ 0.37
COL17A1-202ENST00000369733 HDAC6Q9UBN7 1215 aa17.35■□□□□ 0.37
COL17A1-202ENST00000369733 MYL7Q01449 175 aa17.34■□□□□ 0.37
COL17A1-202ENST00000369733 LRRC47Q8N1G4 583 aaKnown RBP17.34■□□□□ 0.37
COL17A1-202ENST00000369733 IWS1Q96ST2 819 aa17.34■□□□□ 0.37
COL17A1-202ENST00000369733 ZMYND12Q9H0C1 365 aa17.34■□□□□ 0.37
COL17A1-202ENST00000369733 NCOA3Q9Y6Q9 1424 aa17.34■□□□□ 0.37
COL17A1-202ENST00000369733 K7ENM7 598 aa17.34■□□□□ 0.37
COL17A1-202ENST00000369733 DKC1O60832 514 aaKnown RBP eCLIP17.34■□□□□ 0.37
COL17A1-202ENST00000369733 MAN1A1P33908 653 aa17.34■□□□□ 0.37
COL17A1-202ENST00000369733 PPP4R1Q8TF05 950 aa17.34■□□□□ 0.37
COL17A1-202ENST00000369733 DPF2Q92785 391 aa17.34■□□□□ 0.37
COL17A1-202ENST00000369733 STK17AQ9UEE5 414 aa17.34■□□□□ 0.37
COL17A1-202ENST00000369733 ZNF148Q9UQR1 794 aa17.34■□□□□ 0.37
COL17A1-202ENST00000369733 RASGRF2O14827 1237 aa17.34■□□□□ 0.37
COL17A1-202ENST00000369733 ANKRD35Q8N283 1001 aa17.34■□□□□ 0.37
COL17A1-202ENST00000369733 DISC1Q9NRI5 854 aa17.34■□□□□ 0.37
COL17A1-202ENST00000369733 VSNL1P62760 191 aa17.34■□□□□ 0.37
COL17A1-202ENST00000369733 ABCA8O94911 1581 aa17.34■□□□□ 0.37
COL17A1-202ENST00000369733 ECEL1O95672 775 aa17.34■□□□□ 0.37
COL17A1-202ENST00000369733 DR1Q01658 176 aa17.34■□□□□ 0.37
COL17A1-202ENST00000369733 SLMAPQ14BN4 828 aa17.34■□□□□ 0.37
COL17A1-202ENST00000369733 SCYL3Q8IZE3 742 aa17.34■□□□□ 0.37
COL17A1-202ENST00000369733 CCDC24Q8N4L8 307 aa17.34■□□□□ 0.37
COL17A1-202ENST00000369733 AFAP1L2Q8N4X5 818 aa17.34■□□□□ 0.37
COL17A1-202ENST00000369733 REREQ9P2R6 1566 aa17.33■□□□□ 0.37
COL17A1-202ENST00000369733 RPS8P62241 208 aaKnown RBP17.33■□□□□ 0.36
COL17A1-202ENST00000369733 ZYXQ15942 572 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms