RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 DNM2P50570 870 aa12.84□□□□□ -0.35
RAB39B-201ENST00000369454 TRIM14Q14142 442 aa12.84□□□□□ -0.35
RAB39B-201ENST00000369454 KRT79Q5XKE5 535 aa12.84□□□□□ -0.35
RAB39B-201ENST00000369454 CDC42EP5Q6NZY7 148 aa12.84□□□□□ -0.35
RAB39B-201ENST00000369454 NELFCDQ8IXH7 590 aa12.84□□□□□ -0.35
RAB39B-201ENST00000369454 NOA1Q8NC60 698 aaKnown RBP12.84□□□□□ -0.35
RAB39B-201ENST00000369454 SMCR8Q8TEV9 937 aaPredicted RBP12.84□□□□□ -0.35
RAB39B-201ENST00000369454 DHTKD1Q96HY7 919 aaPredicted RBP12.84□□□□□ -0.35
RAB39B-201ENST00000369454 PNMA5Q96PV4 448 aa12.84□□□□□ -0.35
RAB39B-201ENST00000369454 PSMB7Q99436 277 aa12.84□□□□□ -0.35
RAB39B-201ENST00000369454 LACRTQ9GZZ8 138 aa12.84□□□□□ -0.35
RAB39B-201ENST00000369454 ZNHIT6Q9NWK9 470 aaKnown RBP12.84□□□□□ -0.35
RAB39B-201ENST00000369454 GAKO14976 1311 aa12.84□□□□□ -0.35
RAB39B-201ENST00000369454 RCCD1A6NED2 376 aa12.84□□□□□ -0.35
RAB39B-201ENST00000369454 RABGGTAQ92696 567 aa12.84□□□□□ -0.35
RAB39B-201ENST00000369454 DDX12PQ92771 950 aa12.84□□□□□ -0.35
RAB39B-201ENST00000369454 GDAP1L1Q96MZ0 367 aa12.84□□□□□ -0.35
RAB39B-201ENST00000369454 QTRT2Q9H974 415 aaKnown RBP12.84□□□□□ -0.35
RAB39B-201ENST00000369454 DDX25Q9UHL0 483 aaKnown RBP12.84□□□□□ -0.35
RAB39B-201ENST00000369454 SBF2Q86WG5 1849 aa12.83□□□□□ -0.35
RAB39B-201ENST00000369454 NAV1Q8NEY1 1877 aa12.83□□□□□ -0.35
RAB39B-201ENST00000369454 NPHP3-ACAD11A0A0J9YXS1 232 aa12.83□□□□□ -0.36
RAB39B-201ENST00000369454 EPHB6O15197 1021 aa12.83□□□□□ -0.36
RAB39B-201ENST00000369454 EDIL3O43854 480 aa12.83□□□□□ -0.36
RAB39B-201ENST00000369454 IPO7O95373 1038 aaKnown RBP12.83□□□□□ -0.36
RAB39B-201ENST00000369454 USH1GQ495M9 461 aa12.83□□□□□ -0.36
RAB39B-201ENST00000369454 CNNM4Q6P4Q7 775 aa12.83□□□□□ -0.36
RAB39B-201ENST00000369454 BICDL2A1A5D9 508 aa12.83□□□□□ -0.36
RAB39B-201ENST00000369454 ZMYND10O75800 440 aa12.83□□□□□ -0.36
RAB39B-201ENST00000369454 GDF11O95390 407 aa12.83□□□□□ -0.36
RAB39B-201ENST00000369454 ATP1A1P05023 1023 aaKnown RBP12.83□□□□□ -0.36
RAB39B-201ENST00000369454 ADRA2BP18089 450 aa12.83□□□□□ -0.36
RAB39B-201ENST00000369454 SHMT1P34896 483 aa12.83□□□□□ -0.36
RAB39B-201ENST00000369454 HERVK_113P62684 666 aa12.83□□□□□ -0.36
RAB39B-201ENST00000369454 ZNF543Q08ER8 600 aa12.83□□□□□ -0.36
RAB39B-201ENST00000369454 C15orf52Q6ZUT6 534 aaKnown RBP12.83□□□□□ -0.36
RAB39B-201ENST00000369454 ANKRD13CQ8N6S4 541 aa12.83□□□□□ -0.36
RAB39B-201ENST00000369454 PSTPIP2Q9H939 334 aa12.83□□□□□ -0.36
RAB39B-201ENST00000369454 NHEJ1Q9H9Q4 299 aaPredicted RBP12.83□□□□□ -0.36
RAB39B-201ENST00000369454 CAPN11Q9UMQ6 739 aa12.83□□□□□ -0.36
RAB39B-201ENST00000369454 COL24A1Q17RW2 1714 aa12.83□□□□□ -0.36
RAB39B-201ENST00000369454 CTAGE15A4D2H0 777 aa12.83□□□□□ -0.36
RAB39B-201ENST00000369454 RASSF10A6NK89 507 aa12.83□□□□□ -0.36
RAB39B-201ENST00000369454 CTAGE8P0CG41 777 aa12.83□□□□□ -0.36
RAB39B-201ENST00000369454 STAT3P40763 770 aa12.83□□□□□ -0.36
RAB39B-201ENST00000369454 MRPS25P82663 173 aaKnown RBP12.83□□□□□ -0.36
RAB39B-201ENST00000369454 LONRF2Q1L5Z9 754 aa12.83□□□□□ -0.36
RAB39B-201ENST00000369454 FKBP15Q5T1M5 1219 aa12.83□□□□□ -0.36
RAB39B-201ENST00000369454 CTAGE6Q86UF2 777 aa12.83□□□□□ -0.36
RAB39B-201ENST00000369454 C2CD5Q86YS7 1000 aa12.83□□□□□ -0.36
RAB39B-201ENST00000369454 CTAGE4Q8IX94 777 aa12.83□□□□□ -0.36
RAB39B-201ENST00000369454 C7orf25Q9BPX7 421 aa12.83□□□□□ -0.36
RAB39B-201ENST00000369454 ANKZF1Q9H8Y5 726 aa12.83□□□□□ -0.36
RAB39B-201ENST00000369454 MYO6Q9UM54 1294 aa12.83□□□□□ -0.36
RAB39B-201ENST00000369454 DDX60LQ5H9U9 1706 aaKnown RBP12.82□□□□□ -0.36
RAB39B-201ENST00000369454 E9PMD0 336 aa12.82□□□□□ -0.36
RAB39B-201ENST00000369454 SRGNP10124 158 aa12.82□□□□□ -0.36
RAB39B-201ENST00000369454 DNA2P51530 1060 aa12.82□□□□□ -0.36
RAB39B-201ENST00000369454 ASPRV1Q53RT3 343 aa12.82□□□□□ -0.36
RAB39B-201ENST00000369454 CEP112Q8N8E3 955 aa12.82□□□□□ -0.36
RAB39B-201ENST00000369454 FAM163AQ96GL9 167 aaPredicted RBP12.82□□□□□ -0.36
RAB39B-201ENST00000369454 MTMR9Q96QG7 549 aa12.82□□□□□ -0.36
RAB39B-201ENST00000369454 CRACR2AQ9BSW2 395 aa12.82□□□□□ -0.36
RAB39B-201ENST00000369454 PODXL2Q9NZ53 605 aa12.82□□□□□ -0.36
RAB39B-201ENST00000369454 FAM170AA1A519 330 aa12.82□□□□□ -0.36
RAB39B-201ENST00000369454 HLA-DOAP06340 250 aa12.82□□□□□ -0.36
RAB39B-201ENST00000369454 OAS2P29728 719 aaKnown RBP12.82□□□□□ -0.36
RAB39B-201ENST00000369454 GABPAQ06546 454 aa12.82□□□□□ -0.36
RAB39B-201ENST00000369454 GABPB1Q06547 395 aaPredicted RBP12.82□□□□□ -0.36
RAB39B-201ENST00000369454 MIIPQ5JXC2 388 aa12.82□□□□□ -0.36
RAB39B-201ENST00000369454 TEKT1Q969V4 418 aa12.82□□□□□ -0.36
RAB39B-201ENST00000369454 JAKMIP2Q96AA8 810 aa12.82□□□□□ -0.36
RAB39B-201ENST00000369454 COA1Q9GZY4 146 aa12.82□□□□□ -0.36
RAB39B-201ENST00000369454 TMX4Q9H1E5 349 aaPredicted RBP12.82□□□□□ -0.36
RAB39B-201ENST00000369454 PCDHA12Q9UN75 941 aa12.82□□□□□ -0.36
RAB39B-201ENST00000369454 PNMA6FA0A0J9YX94 578 aa12.82□□□□□ -0.36
RAB39B-201ENST00000369454 ZNF185O15231 689 aa12.82□□□□□ -0.36
RAB39B-201ENST00000369454 SLC1A4P43007 532 aa12.82□□□□□ -0.36
RAB39B-201ENST00000369454 APBA1Q02410 837 aa12.82□□□□□ -0.36
RAB39B-201ENST00000369454 UTP14CQ5TAP6 766 aaKnown RBP12.82□□□□□ -0.36
RAB39B-201ENST00000369454 SLC30A10Q6XR72 485 aa12.82□□□□□ -0.36
RAB39B-201ENST00000369454 CUL5Q93034 780 aa12.82□□□□□ -0.36
RAB39B-201ENST00000369454 FGFBP2Q9BYJ0 223 aa12.82□□□□□ -0.36
RAB39B-201ENST00000369454 TRIM34Q9BYJ4 488 aa12.82□□□□□ -0.36
RAB39B-201ENST00000369454 DEF6Q9H4E7 631 aa12.82□□□□□ -0.36
RAB39B-201ENST00000369454 NLRC4Q9NPP4 1024 aa12.82□□□□□ -0.36
RAB39B-201ENST00000369454 JADE2Q9NQC1 790 aa12.82□□□□□ -0.36
RAB39B-201ENST00000369454 KIAA1024Q9UPX6 916 aa12.82□□□□□ -0.36
RAB39B-201ENST00000369454 ATP6V0A2Q9Y487 856 aa12.82□□□□□ -0.36
RAB39B-201ENST00000369454 MAST2Q6P0Q8 1798 aa12.81□□□□□ -0.36
RAB39B-201ENST00000369454 TULP1O00294 542 aaPredicted RBP12.81□□□□□ -0.36
RAB39B-201ENST00000369454 ARID5AQ03989 594 aa12.81□□□□□ -0.36
RAB39B-201ENST00000369454 SMC1AQ14683 1233 aaKnown RBP12.81□□□□□ -0.36
RAB39B-201ENST00000369454 CERS3Q8IU89 383 aa12.81□□□□□ -0.36
RAB39B-201ENST00000369454 SP8Q8IXZ3 490 aa12.81□□□□□ -0.36
RAB39B-201ENST00000369454 SPICE1Q8N0Z3 855 aa12.81□□□□□ -0.36
RAB39B-201ENST00000369454 PROM2Q8N271 834 aa12.81□□□□□ -0.36
RAB39B-201ENST00000369454 CCDC42Q96M95 316 aa12.81□□□□□ -0.36
RAB39B-201ENST00000369454 CRAMP1Q96RY5 1269 aa12.81□□□□□ -0.36
RAB39B-201ENST00000369454 DNAJC7Q99615 494 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms