RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 KIF1CO43896 1103 aaKnown RBP19.34■□□□□ 0.69
CHTOP-203ENST00000368690 NAP1L1P55209 391 aaKnown RBP19.34■□□□□ 0.69
CHTOP-203ENST00000368690 IFT20Q8IY31 132 aa19.34■□□□□ 0.69
CHTOP-203ENST00000368690 C4orf32Q8N8J7 132 aa19.34■□□□□ 0.69
CHTOP-203ENST00000368690 ZIM3Q96PE6 472 aa19.34■□□□□ 0.69
CHTOP-203ENST00000368690 MAGEF1Q9HAY2 307 aa19.34■□□□□ 0.69
CHTOP-203ENST00000368690 LRWD1Q9UFC0 647 aa19.34■□□□□ 0.69
CHTOP-203ENST00000368690 SAMM50Q9Y512 469 aa19.34■□□□□ 0.69
CHTOP-203ENST00000368690 PCDHA13Q9Y5I0 950 aa19.34■□□□□ 0.69
CHTOP-203ENST00000368690 ZNF263O14978 683 aa19.33■□□□□ 0.69
CHTOP-203ENST00000368690 LSP1P33241 339 aa19.33■□□□□ 0.69
CHTOP-203ENST00000368690 PDCLQ13371 301 aa19.33■□□□□ 0.69
CHTOP-203ENST00000368690 CCDC96Q2M329 555 aa19.33■□□□□ 0.69
CHTOP-203ENST00000368690 DUSP9Q99956 384 aaKnown RBP19.33■□□□□ 0.69
CHTOP-203ENST00000368690 IFIH1Q9BYX4 1025 aaKnown RBP19.33■□□□□ 0.69
CHTOP-203ENST00000368690 GDF3Q9NR23 364 aa19.33■□□□□ 0.69
CHTOP-203ENST00000368690 CAPN6Q9Y6Q1 641 aa19.33■□□□□ 0.69
CHTOP-203ENST00000368690 CNTNAP5Q8WYK1 1306 aa19.33■□□□□ 0.69
CHTOP-203ENST00000368690 DUOX1Q9NRD9 1551 aa19.33■□□□□ 0.68
CHTOP-203ENST00000368690 PJA2O43164 708 aa19.33■□□□□ 0.68
CHTOP-203ENST00000368690 PLEKHA8P1O95397 391 aa19.33■□□□□ 0.68
CHTOP-203ENST00000368690 HMGB2P26583 209 aaKnown RBP19.33■□□□□ 0.68
CHTOP-203ENST00000368690 CYP27A1Q02318 531 aa19.33■□□□□ 0.68
CHTOP-203ENST00000368690 TROAPQ12815 778 aa19.33■□□□□ 0.68
CHTOP-203ENST00000368690 NFIXQ14938 502 aa19.33■□□□□ 0.68
CHTOP-203ENST00000368690 CCDC181Q5TID7 509 aa19.33■□□□□ 0.68
CHTOP-203ENST00000368690 CSGALNACT2Q8N6G5 542 aa19.33■□□□□ 0.68
CHTOP-203ENST00000368690 KBTBD4Q9NVX7 518 aa19.33■□□□□ 0.68
CHTOP-203ENST00000368690 DONSONQ9NYP3 566 aa19.33■□□□□ 0.68
CHTOP-203ENST00000368690 CCDC172P0C7W6 258 aa19.32■□□□□ 0.68
CHTOP-203ENST00000368690 CCNE1P24864 410 aa19.32■□□□□ 0.68
CHTOP-203ENST00000368690 IFIT1BQ5T764 474 aaKnown RBP19.32■□□□□ 0.68
CHTOP-203ENST00000368690 C8orf74Q6P047 294 aa19.32■□□□□ 0.68
CHTOP-203ENST00000368690 C3orf67Q6ZVT6 689 aa19.32■□□□□ 0.68
CHTOP-203ENST00000368690 C3orf20Q8ND61 904 aa19.32■□□□□ 0.68
CHTOP-203ENST00000368690 CUEDC2Q9H467 287 aa19.32■□□□□ 0.68
CHTOP-203ENST00000368690 H0YHG0 523 aa19.32■□□□□ 0.68
CHTOP-203ENST00000368690 CHUKO15111 745 aa19.32■□□□□ 0.68
CHTOP-203ENST00000368690 GYS1P13807 737 aa19.32■□□□□ 0.68
CHTOP-203ENST00000368690 MCM7P33993 719 aa19.32■□□□□ 0.68
CHTOP-203ENST00000368690 IGHMBP2P38935 993 aaKnown RBP19.32■□□□□ 0.68
CHTOP-203ENST00000368690 PSEN1P49768 467 aa19.32■□□□□ 0.68
CHTOP-203ENST00000368690 SMTNP53814 917 aa19.32■□□□□ 0.68
CHTOP-203ENST00000368690 PAK2Q13177 524 aa19.32■□□□□ 0.68
CHTOP-203ENST00000368690 NAALADL2Q58DX5 795 aa19.32■□□□□ 0.68
CHTOP-203ENST00000368690 NAA35Q5VZE5 725 aa19.32■□□□□ 0.68
CHTOP-203ENST00000368690 PIK3AP1Q6ZUJ8 805 aa19.32■□□□□ 0.68
CHTOP-203ENST00000368690 P2RX5Q93086 422 aa19.32■□□□□ 0.68
CHTOP-203ENST00000368690 CCSER1Q9C0I3 900 aa19.32■□□□□ 0.68
CHTOP-203ENST00000368690 C21orf2O43822 256 aa19.31■□□□□ 0.68
CHTOP-203ENST00000368690 FGRP09769 529 aa19.31■□□□□ 0.68
CHTOP-203ENST00000368690 COBLL1Q53SF7 1204 aa19.31■□□□□ 0.68
CHTOP-203ENST00000368690 MIIPQ5JXC2 388 aa19.31■□□□□ 0.68
CHTOP-203ENST00000368690 FKBP15Q5T1M5 1219 aa19.31■□□□□ 0.68
CHTOP-203ENST00000368690 CFAP58Q5T655 872 aa19.31■□□□□ 0.68
CHTOP-203ENST00000368690 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.31■□□□□ 0.68
CHTOP-203ENST00000368690 VCPKMTQ9H867 229 aa19.31■□□□□ 0.68
CHTOP-203ENST00000368690 LAMB2P55268 1798 aa19.31■□□□□ 0.68
CHTOP-203ENST00000368690 HMGB1P1B2RPK0 211 aaPredicted RBP19.3■□□□□ 0.68
CHTOP-203ENST00000368690 PPP1R37O75864 691 aa19.3■□□□□ 0.68
CHTOP-203ENST00000368690 SCG2P13521 617 aa19.3■□□□□ 0.68
CHTOP-203ENST00000368690 CALML3P27482 149 aa19.3■□□□□ 0.68
CHTOP-203ENST00000368690 NLRP5P59047 1200 aa19.3■□□□□ 0.68
CHTOP-203ENST00000368690 PTGISQ16647 500 aa19.3■□□□□ 0.68
CHTOP-203ENST00000368690 RNF10Q8N5U6 811 aaKnown RBP19.3■□□□□ 0.68
CHTOP-203ENST00000368690 HELBQ8NG08 1087 aaPredicted RBP19.3■□□□□ 0.68
CHTOP-203ENST00000368690 NLRP3Q96P20 1036 aa19.3■□□□□ 0.68
CHTOP-203ENST00000368690 MYH10P35580 1976 aa19.3■□□□□ 0.68
CHTOP-203ENST00000368690 TNS1Q9HBL0 1735 aaKnown RBP19.3■□□□□ 0.68
CHTOP-203ENST00000368690 SLC7A5Q01650 507 aa19.3■□□□□ 0.68
CHTOP-203ENST00000368690 EN1Q05925 392 aaPredicted RBP19.3■□□□□ 0.68
CHTOP-203ENST00000368690 ACTN3Q08043 901 aaPredicted RBP19.3■□□□□ 0.68
CHTOP-203ENST00000368690 PPP4R3AQ6IN85 833 aa19.3■□□□□ 0.68
CHTOP-203ENST00000368690 TMED8Q6PL24 325 aaPredicted RBP19.3■□□□□ 0.68
CHTOP-203ENST00000368690 IQCA1Q86XH1 822 aa19.3■□□□□ 0.68
CHTOP-203ENST00000368690 EIF1ADQ8N9N8 165 aaKnown RBP19.3■□□□□ 0.68
CHTOP-203ENST00000368690 CNBD1Q8NA66 436 aa19.3■□□□□ 0.68
CHTOP-203ENST00000368690 CCDC47Q96A33 483 aaKnown RBP19.3■□□□□ 0.68
CHTOP-203ENST00000368690 CNOT6LQ96LI5 555 aaKnown RBP19.3■□□□□ 0.68
CHTOP-203ENST00000368690 RNPC3Q96LT9 517 aaKnown RBP19.3■□□□□ 0.68
CHTOP-203ENST00000368690 MOCS3O95396 460 aa19.29■□□□□ 0.68
CHTOP-203ENST00000368690 KIF11P52732 1056 aa19.29■□□□□ 0.68
CHTOP-203ENST00000368690 CFAP221Q4G0U5 840 aa19.29■□□□□ 0.68
CHTOP-203ENST00000368690 TTC19Q6DKK2 380 aaPredicted RBP19.29■□□□□ 0.68
CHTOP-203ENST00000368690 ARHGAP27Q6ZUM4 889 aa19.29■□□□□ 0.68
CHTOP-203ENST00000368690 WHAMMQ8TF30 809 aa19.29■□□□□ 0.68
CHTOP-203ENST00000368690 ZNF473Q8WTR7 871 aaKnown RBP19.29■□□□□ 0.68
CHTOP-203ENST00000368690 NOC4LQ9BVI4 516 aaKnown RBP19.29■□□□□ 0.68
CHTOP-203ENST00000368690 CEP83Q9Y592 693 aa19.29■□□□□ 0.68
CHTOP-203ENST00000368690 hCG_1642624A0A1W2PR95 340 aa19.29■□□□□ 0.68
CHTOP-203ENST00000368690 ZNF233A6NK53 670 aa19.29■□□□□ 0.68
CHTOP-203ENST00000368690 MYO1FO00160 1098 aa19.29■□□□□ 0.68
CHTOP-203ENST00000368690 FAM107AO95990 144 aa19.29■□□□□ 0.68
CHTOP-203ENST00000368690 NR1D1P20393 614 aa19.29■□□□□ 0.68
CHTOP-203ENST00000368690 PFKFB3Q16875 520 aaPredicted RBP19.29■□□□□ 0.68
CHTOP-203ENST00000368690 NFRKBQ6P4R8 1299 aa19.29■□□□□ 0.68
CHTOP-203ENST00000368690 RABEP2Q9H5N1 569 aa19.29■□□□□ 0.68
CHTOP-203ENST00000368690 MLXIPQ9HAP2 919 aa19.29■□□□□ 0.68
CHTOP-203ENST00000368690 ARHGAP20Q9P2F6 1191 aa19.29■□□□□ 0.68
CHTOP-203ENST00000368690 COL24A1Q17RW2 1714 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms