RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 KAZALD1Q96I82 304 aa13.55□□□□□ -0.24
PTPRK-203ENST00000368207 MAK16Q9BXY0 300 aaKnown RBP13.55□□□□□ -0.24
PTPRK-203ENST00000368207 GOLPH3LQ9H4A5 285 aa13.55□□□□□ -0.24
PTPRK-203ENST00000368207 METTL14Q9HCE5 456 aaKnown RBP13.55□□□□□ -0.24
PTPRK-203ENST00000368207 CD163L1Q9NR16 1453 aa13.55□□□□□ -0.24
PTPRK-203ENST00000368207 CLIC2O15247 247 aa13.55□□□□□ -0.24
PTPRK-203ENST00000368207 EIF2AK2P19525 551 aaKnown RBP13.55□□□□□ -0.24
PTPRK-203ENST00000368207 HSPA1LP34931 641 aa13.55□□□□□ -0.24
PTPRK-203ENST00000368207 EXOSC10Q01780 885 aaKnown RBP13.55□□□□□ -0.24
PTPRK-203ENST00000368207 DHTKD1Q96HY7 919 aaPredicted RBP13.55□□□□□ -0.24
PTPRK-203ENST00000368207 ZNF277Q9NRM2 450 aaPredicted RBP13.55□□□□□ -0.24
PTPRK-203ENST00000368207 POLR1AO95602 1720 aaPredicted RBP13.54□□□□□ -0.24
PTPRK-203ENST00000368207 CHRNA5P30532 468 aa13.54□□□□□ -0.24
PTPRK-203ENST00000368207 IGBP1P78318 339 aa13.54□□□□□ -0.24
PTPRK-203ENST00000368207 EN1Q05925 392 aaPredicted RBP13.54□□□□□ -0.24
PTPRK-203ENST00000368207 SUPT20HL1Q3ZLR7 823 aa13.54□□□□□ -0.24
PTPRK-203ENST00000368207 ENOX1Q8TC92 643 aaKnown RBP13.54□□□□□ -0.24
PTPRK-203ENST00000368207 BCL2L12Q9HB09 334 aa13.54□□□□□ -0.24
PTPRK-203ENST00000368207 PIM2Q9P1W9 311 aa13.54□□□□□ -0.24
PTPRK-203ENST00000368207 WDR19Q8NEZ3 1342 aa13.54□□□□□ -0.24
PTPRK-203ENST00000368207 NTSR2O95665 410 aa13.54□□□□□ -0.24
PTPRK-203ENST00000368207 EEPD1Q7L9B9 569 aa13.54□□□□□ -0.24
PTPRK-203ENST00000368207 IQCDQ96DY2 449 aa13.54□□□□□ -0.24
PTPRK-203ENST00000368207 STK17AQ9UEE5 414 aa13.54□□□□□ -0.24
PTPRK-203ENST00000368207 A0A0G2JLW4 131 aa13.54□□□□□ -0.24
PTPRK-203ENST00000368207 FKBP3Q00688 224 aaKnown RBP13.54□□□□□ -0.24
PTPRK-203ENST00000368207 DMP1Q13316 513 aaPredicted RBP13.54□□□□□ -0.24
PTPRK-203ENST00000368207 EXOC3L4Q17RC7 722 aa13.54□□□□□ -0.24
PTPRK-203ENST00000368207 CFAP221Q4G0U5 840 aa13.54□□□□□ -0.24
PTPRK-203ENST00000368207 ZNF365Q70YC5 407 aa13.54□□□□□ -0.24
PTPRK-203ENST00000368207 SGMS1Q86VZ5 419 aa13.54□□□□□ -0.24
PTPRK-203ENST00000368207 GDAQ9Y2T3 454 aa13.54□□□□□ -0.24
PTPRK-203ENST00000368207 PNPLA7Q6ZV29 1317 aa13.54□□□□□ -0.24
PTPRK-203ENST00000368207 STK36Q9NRP7 1315 aa13.54□□□□□ -0.24
PTPRK-203ENST00000368207 GUCY1A2P33402 732 aa13.54□□□□□ -0.24
PTPRK-203ENST00000368207 RBL2Q08999 1139 aa13.54□□□□□ -0.24
PTPRK-203ENST00000368207 GOLGA5Q8TBA6 731 aa13.54□□□□□ -0.24
PTPRK-203ENST00000368207 POMGNT1Q8WZA1 660 aa13.54□□□□□ -0.24
PTPRK-203ENST00000368207 WDR11Q9BZH6 1224 aa13.54□□□□□ -0.24
PTPRK-203ENST00000368207 DISC1Q9NRI5 854 aa13.54□□□□□ -0.24
PTPRK-203ENST00000368207 SEPT9Q9UHD8 586 aaPredicted RBP13.54□□□□□ -0.24
PTPRK-203ENST00000368207 SPATA31D1Q6ZQQ2 1576 aa13.53□□□□□ -0.24
PTPRK-203ENST00000368207 MROH2AA6NES4 1674 aa13.53□□□□□ -0.24
PTPRK-203ENST00000368207 USP17L10C9JJH3 530 aa13.53□□□□□ -0.24
PTPRK-203ENST00000368207 KIF4AO95239 1232 aa13.53□□□□□ -0.24
PTPRK-203ENST00000368207 SLC8A3P57103 927 aa13.53□□□□□ -0.24
PTPRK-203ENST00000368207 KCTD2Q14681 263 aa13.53□□□□□ -0.24
PTPRK-203ENST00000368207 RESP18Q5W5W9 173 aa13.53□□□□□ -0.24
PTPRK-203ENST00000368207 ARL6IP4Q66PJ3 421 aaKnown RBP13.53□□□□□ -0.24
PTPRK-203ENST00000368207 ZBTB8OSQ8IWT0 167 aa13.53□□□□□ -0.24
PTPRK-203ENST00000368207 ST7Q9NRC1 585 aa13.53□□□□□ -0.24
PTPRK-203ENST00000368207 ANKFY1Q9P2R3 1169 aa13.53□□□□□ -0.24
PTPRK-203ENST00000368207 KCNG1Q9UIX4 513 aa13.53□□□□□ -0.24
PTPRK-203ENST00000368207 PNMA2Q9UL42 364 aa13.53□□□□□ -0.24
PTPRK-203ENST00000368207 POTEMA6NI47 508 aa13.53□□□□□ -0.24
PTPRK-203ENST00000368207 HNRNPDLO14979 420 aaKnown RBP13.53□□□□□ -0.24
PTPRK-203ENST00000368207 ASNSP08243 561 aa13.53□□□□□ -0.24
PTPRK-203ENST00000368207 EEF1GP26641 437 aaKnown RBP13.53□□□□□ -0.24
PTPRK-203ENST00000368207 USP14P54578 494 aa13.53□□□□□ -0.24
PTPRK-203ENST00000368207 KMT5BQ4FZB7 885 aa13.53□□□□□ -0.24
PTPRK-203ENST00000368207 SEPT14Q6ZU15 432 aa13.53□□□□□ -0.24
PTPRK-203ENST00000368207 HAUS4Q9H6D7 363 aa13.53□□□□□ -0.24
PTPRK-203ENST00000368207 KCNK9Q9NPC2 374 aa13.53□□□□□ -0.24
PTPRK-203ENST00000368207 KIF28PB7ZC32 967 aa13.53□□□□□ -0.24
PTPRK-203ENST00000368207 PRPF6O94906 941 aaKnown RBP13.53□□□□□ -0.24
PTPRK-203ENST00000368207 PLA2G4BP0C869 781 aa13.53□□□□□ -0.24
PTPRK-203ENST00000368207 HPDP32754 393 aaPredicted RBP13.53□□□□□ -0.24
PTPRK-203ENST00000368207 NKX1-1Q15270 411 aaPredicted RBP13.53□□□□□ -0.24
PTPRK-203ENST00000368207 TBC1D16Q8TBP0 767 aa13.53□□□□□ -0.24
PTPRK-203ENST00000368207 OGFRQ9NZT2 677 aa13.53□□□□□ -0.24
PTPRK-203ENST00000368207 ASIC3Q9UHC3 531 aa13.53□□□□□ -0.24
PTPRK-203ENST00000368207 FAM47CQ5HY64 1035 aa13.52□□□□□ -0.24
PTPRK-203ENST00000368207 STAG2Q8N3U4 1231 aa13.52□□□□□ -0.24
PTPRK-203ENST00000368207 TRIM58Q8NG06 486 aa13.52□□□□□ -0.24
PTPRK-203ENST00000368207 MRRFQ96E11 262 aaKnown RBP13.52□□□□□ -0.24
PTPRK-203ENST00000368207 HINFPQ9BQA5 517 aa13.52□□□□□ -0.24
PTPRK-203ENST00000368207 ZBTB5O15062 677 aa13.52□□□□□ -0.24
PTPRK-203ENST00000368207 ACTN4O43707 911 aaKnown RBP13.52□□□□□ -0.24
PTPRK-203ENST00000368207 AKR1B1P15121 316 aa13.52□□□□□ -0.24
PTPRK-203ENST00000368207 FAM83BQ5T0W9 1011 aa13.52□□□□□ -0.24
PTPRK-203ENST00000368207 SP8Q8IXZ3 490 aa13.52□□□□□ -0.24
PTPRK-203ENST00000368207 TSNARE1Q96NA8 513 aa13.52□□□□□ -0.24
PTPRK-203ENST00000368207 BHMT2Q9H2M3 363 aa13.52□□□□□ -0.24
PTPRK-203ENST00000368207 TMEM260Q9NX78 707 aa13.52□□□□□ -0.24
PTPRK-203ENST00000368207 RIMS1Q86UR5 1692 aaKnown RBP13.52□□□□□ -0.25
PTPRK-203ENST00000368207 TMEM131LA2VDJ0 1609 aa13.52□□□□□ -0.25
PTPRK-203ENST00000368207 CCNE1P24864 410 aa13.52□□□□□ -0.25
PTPRK-203ENST00000368207 CUL4BQ13620 913 aa13.52□□□□□ -0.25
PTPRK-203ENST00000368207 RC3H1Q5TC82 1133 aaKnown RBP13.52□□□□□ -0.25
PTPRK-203ENST00000368207 SND1Q7KZF4 910 aaKnown RBP eCLIP13.52□□□□□ -0.255e-6■□□□□ 9.5
PTPRK-203ENST00000368207 IFT20Q8IY31 132 aa13.52□□□□□ -0.25
PTPRK-203ENST00000368207 ARFGAP2Q8N6H7 521 aa13.52□□□□□ -0.25
PTPRK-203ENST00000368207 OTUD6BQ8N6M0 293 aa13.52□□□□□ -0.25
PTPRK-203ENST00000368207 CCDC97Q96F63 343 aaPredicted RBP13.52□□□□□ -0.25
PTPRK-203ENST00000368207 KCNK3O14649 394 aa13.52□□□□□ -0.25
PTPRK-203ENST00000368207 SYCE1Q8N0S2 351 aa13.52□□□□□ -0.25
PTPRK-203ENST00000368207 ATP6V0A1Q93050 837 aa13.52□□□□□ -0.25
PTPRK-203ENST00000368207 NACC1Q96RE7 527 aa13.52□□□□□ -0.25
PTPRK-203ENST00000368207 PCIF1Q9H4Z3 704 aa13.52□□□□□ -0.25
PTPRK-203ENST00000368207 UTP11Q9Y3A2 253 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms