RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 GPATCH11Q8N954 259 aa15.09■□□□□ 0.01
PRKN-205ENST00000366897 MTMR8Q96EF0 704 aa15.09■□□□□ 0.01
PRKN-205ENST00000366897 ZIM3Q96PE6 472 aa15.09■□□□□ 0.01
PRKN-205ENST00000366897 PYM1Q9BRP8 204 aaKnown RBP15.09■□□□□ 0.01
PRKN-205ENST00000366897 FAM107BQ9H098 131 aa15.09■□□□□ 0.01
PRKN-205ENST00000366897 KANSL2Q9H9L4 492 aa15.09■□□□□ 0.01
PRKN-205ENST00000366897 DCP1AQ9NPI6 582 aaPredicted RBP15.09■□□□□ 0.01
PRKN-205ENST00000366897 TFCP2L1Q9NZI6 479 aa15.09■□□□□ 0.01
PRKN-205ENST00000366897 PCDHA6Q9UN73 950 aa15.09■□□□□ 0.01
PRKN-205ENST00000366897 PCDHA4Q9UN74 947 aa15.09■□□□□ 0.01
PRKN-205ENST00000366897 PACSIN2Q9UNF0 486 aaPredicted RBP15.09■□□□□ 0.01
PRKN-205ENST00000366897 PCDHA8Q9Y5H6 950 aa15.09■□□□□ 0.01
PRKN-205ENST00000366897 BCORQ6W2J9 1755 aa15.09■□□□□ 0.01
PRKN-205ENST00000366897 DUOX1Q9NRD9 1551 aa15.09■□□□□ 0.01
PRKN-205ENST00000366897 DOCK2Q92608 1830 aa15.09■□□□□ 0.01
PRKN-205ENST00000366897 CICQ96RK0 1608 aaPredicted RBP15.09■□□□□ 0.01
PRKN-205ENST00000366897 USP17L3A6NCW0 530 aa15.09■□□□□ 0.01
PRKN-205ENST00000366897 USP17L4A6NCW7 530 aa15.09■□□□□ 0.01
PRKN-205ENST00000366897 LRRC53A6NM62 1247 aa15.09■□□□□ 0.01
PRKN-205ENST00000366897 GUCY2CP25092 1073 aa15.09■□□□□ 0.01
PRKN-205ENST00000366897 PRDX5P30044 214 aa15.09■□□□□ 0.01
PRKN-205ENST00000366897 CARSP49589 748 aaKnown RBP15.09■□□□□ 0.01
PRKN-205ENST00000366897 KCNB1Q14721 858 aa15.09■□□□□ 0.01
PRKN-205ENST00000366897 USP17L1Q7RTZ2 530 aa15.09■□□□□ 0.01
PRKN-205ENST00000366897 CABP7Q86V35 215 aa15.09■□□□□ 0.01
PRKN-205ENST00000366897 TRIM58Q8NG06 486 aa15.09■□□□□ 0.01
PRKN-205ENST00000366897 TRIM9Q9C026 710 aa15.09■□□□□ 0.01
PRKN-205ENST00000366897 SEMA6BQ9H3T3 888 aa15.09■□□□□ 0.01
PRKN-205ENST00000366897 NFU1Q9UMS0 254 aa15.09■□□□□ 0.01
PRKN-205ENST00000366897 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.09■□□□□ 0.014e-10■■■■□ 21.6
PRKN-205ENST00000366897 SHTN1A0MZ66 631 aa15.08■□□□□ 0.01
PRKN-205ENST00000366897 NDUFAB1O14561 156 aa15.08■□□□□ 0.01
PRKN-205ENST00000366897 USO1O60763 962 aaKnown RBP15.08■□□□□ 0.01
PRKN-205ENST00000366897 GLI1P08151 1106 aa15.08■□□□□ 0.01
PRKN-205ENST00000366897 TECP42680 631 aa15.08■□□□□ 0.01
PRKN-205ENST00000366897 SLC1A4P43007 532 aa15.08■□□□□ 0.01
PRKN-205ENST00000366897 TFAP4Q01664 338 aa15.08■□□□□ 0.01
PRKN-205ENST00000366897 IQCEQ6IPM2 695 aa15.08■□□□□ 0.01
PRKN-205ENST00000366897 AMOTL1Q8IY63 956 aa15.08■□□□□ 0.01
PRKN-205ENST00000366897 MMGT1Q8N4V1 131 aa15.08■□□□□ 0.01
PRKN-205ENST00000366897 PROCA1Q8NCQ7 364 aaPredicted RBP15.08■□□□□ 0.01
PRKN-205ENST00000366897 KIAA0895Q8NCT3 520 aa15.08■□□□□ 0.01
PRKN-205ENST00000366897 GLIS3Q8NEA6 775 aa15.08■□□□□ 0.01
PRKN-205ENST00000366897 BRIP1Q9BX63 1249 aa15.08■□□□□ 0.01
PRKN-205ENST00000366897 NLRC4Q9NPP4 1024 aa15.08■□□□□ 0.01
PRKN-205ENST00000366897 STIM2Q9P246 746 aa15.08■□□□□ 0.01
PRKN-205ENST00000366897 GUCY1A3Q02108 690 aa15.08■□□□□ 0
PRKN-205ENST00000366897 MECOMQ03112 1051 aa15.08■□□□□ 0
PRKN-205ENST00000366897 C8orf74Q6P047 294 aa15.08■□□□□ 0
PRKN-205ENST00000366897 SMIM5Q71RC9 77 aa15.08■□□□□ 0
PRKN-205ENST00000366897 CCDC43Q96MW1 224 aaKnown RBP15.08■□□□□ 0
PRKN-205ENST00000366897 UIMC1Q96RL1 719 aa15.08■□□□□ 0
PRKN-205ENST00000366897 MCM9Q9NXL9 1143 aa15.08■□□□□ 0
PRKN-205ENST00000366897 RREB1Q92766 1687 aa15.08■□□□□ 0
PRKN-205ENST00000366897 CYTH3O43739 400 aa15.07■□□□□ 0
PRKN-205ENST00000366897 CALML3P27482 149 aa15.07■□□□□ 0
PRKN-205ENST00000366897 MAGEA1P43355 309 aa15.07■□□□□ 0
PRKN-205ENST00000366897 LRRC41Q15345 812 aa15.07■□□□□ 0
PRKN-205ENST00000366897 KCNV1Q6PIU1 500 aa15.07■□□□□ 0
PRKN-205ENST00000366897 MMS22LQ6ZRQ5 1243 aa15.07■□□□□ 0
PRKN-205ENST00000366897 SLC44A5Q8NCS7 719 aa15.07■□□□□ 0
PRKN-205ENST00000366897 PNMA1Q8ND90 353 aa15.07■□□□□ 0
PRKN-205ENST00000366897 DHTKD1Q96HY7 919 aaPredicted RBP15.07■□□□□ 0
PRKN-205ENST00000366897 NUP58Q9BVL2 599 aa15.07■□□□□ 0
PRKN-205ENST00000366897 NUP98P52948 1817 aa15.07■□□□□ 0
PRKN-205ENST00000366897 LOC102724159A0A0B4J2E5 919 aa15.07■□□□□ 0
PRKN-205ENST00000366897 ERVV-1B6SEH8 477 aa15.07■□□□□ 0
PRKN-205ENST00000366897 MYO1FO00160 1098 aa15.07■□□□□ 0
PRKN-205ENST00000366897 FTCDO95954 541 aa15.07■□□□□ 0
PRKN-205ENST00000366897 PWP2Q15269 919 aaKnown RBP15.07■□□□□ 0
PRKN-205ENST00000366897 TDRD12Q587J7 1177 aaKnown RBP15.07■□□□□ 0
PRKN-205ENST00000366897 TLR10Q9BXR5 811 aa15.07■□□□□ 0
PRKN-205ENST00000366897 IL17RBQ9NRM6 502 aa15.07■□□□□ 0
PRKN-205ENST00000366897 DOT1LQ8TEK3 1739 aa15.07■□□□□ 0
PRKN-205ENST00000366897 BTAF1O14981 1849 aa15.07■□□□□ 0
PRKN-205ENST00000366897 CCNT1O60563 726 aaKnown RBP15.07■□□□□ 0
PRKN-205ENST00000366897 HSF2BPO75031 334 aa15.07■□□□□ 0
PRKN-205ENST00000366897 INPP5BP32019 993 aa15.07■□□□□ 0
PRKN-205ENST00000366897 IL6STP40189 918 aaPredicted RBP15.07■□□□□ 0
PRKN-205ENST00000366897 SEC24CP53992 1094 aa15.07■□□□□ 0
PRKN-205ENST00000366897 ARID5AQ03989 594 aa15.07■□□□□ 0
PRKN-205ENST00000366897 NNTQ13423 1086 aa15.07■□□□□ 0
PRKN-205ENST00000366897 CCDC24Q8N4L8 307 aa15.07■□□□□ 0
PRKN-205ENST00000366897 SH3GL2Q99962 352 aa15.07■□□□□ 0
PRKN-205ENST00000366897 TANGO6Q9C0B7 1094 aa15.07■□□□□ 0
PRKN-205ENST00000366897 HYOU1Q9Y4L1 999 aa15.07■□□□□ 0
PRKN-205ENST00000366897 CAPN7Q9Y6W3 813 aa15.07■□□□□ 0
PRKN-205ENST00000366897 FLT1P17948 1338 aa15.06■□□□□ 0
PRKN-205ENST00000366897 MNAT1P51948 309 aa15.06■□□□□ 0
PRKN-205ENST00000366897 GUCY2DQ02846 1103 aa15.06■□□□□ 0
PRKN-205ENST00000366897 DNAAF5Q86Y56 855 aa15.06■□□□□ 0
PRKN-205ENST00000366897 FAM84BQ96KN1 310 aaPredicted RBP15.06■□□□□ 0
PRKN-205ENST00000366897 CENPHQ9H3R5 247 aa15.06■□□□□ 0
PRKN-205ENST00000366897 EPB41L5Q9HCM4 733 aa15.06■□□□□ 0
PRKN-205ENST00000366897 STX8Q9UNK0 236 aa15.06■□□□□ 0
PRKN-205ENST00000366897 PLAGL2Q9UPG8 496 aa15.06■□□□□ 0
PRKN-205ENST00000366897 FAM170AA1A519 330 aa15.06■□□□□ 0
PRKN-205ENST00000366897 CPP00450 1065 aa15.06■□□□□ 0
PRKN-205ENST00000366897 IBSPP21815 317 aaPredicted RBP15.06■□□□□ 0
PRKN-205ENST00000366897 HNRNPH1P31943 449 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms