RNA–Protein interactions for RNA: ENST00000366740.5

MRPL55-213, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-213ENST00000366740 ORC4O43929 436 aa13.74□□□□□ -0.21
MRPL55-213ENST00000366740 ACTN1P12814 892 aa13.74□□□□□ -0.21
MRPL55-213ENST00000366740 KCNQ1P51787 676 aa13.74□□□□□ -0.21
MRPL55-213ENST00000366740 PTPN11Q06124 597 aaPredicted RBP13.74□□□□□ -0.21
MRPL55-213ENST00000366740 NMIQ13287 307 aaPredicted RBP13.74□□□□□ -0.21
MRPL55-213ENST00000366740 NFRKBQ6P4R8 1299 aa13.74□□□□□ -0.21
MRPL55-213ENST00000366740 DEFB128Q7Z7B8 93 aa13.74□□□□□ -0.21
MRPL55-213ENST00000366740 MICALL1Q8N3F8 863 aa13.74□□□□□ -0.21
MRPL55-213ENST00000366740 MTG1Q9BT17 334 aaPredicted RBP13.74□□□□□ -0.21
MRPL55-213ENST00000366740 C1QTNF1Q9BXJ1 281 aa13.74□□□□□ -0.21
MRPL55-213ENST00000366740 INCENPQ9NQS7 918 aa13.74□□□□□ -0.21
MRPL55-213ENST00000366740 HELLSQ9NRZ9 838 aa13.74□□□□□ -0.21
MRPL55-213ENST00000366740 LOXHD1Q8IVV2 1947 aa13.74□□□□□ -0.21
MRPL55-213ENST00000366740 RFXAPO00287 272 aa13.73□□□□□ -0.21
MRPL55-213ENST00000366740 MYL3P08590 195 aa13.73□□□□□ -0.21
MRPL55-213ENST00000366740 IQCF3P0C7M6 154 aa13.73□□□□□ -0.21
MRPL55-213ENST00000366740 SDSP20132 328 aa13.73□□□□□ -0.21
MRPL55-213ENST00000366740 EDNRBP24530 442 aa13.73□□□□□ -0.21
MRPL55-213ENST00000366740 CCDC96Q2M329 555 aa13.73□□□□□ -0.21
MRPL55-213ENST00000366740 NBPF20Q3BBV1 942 aa13.73□□□□□ -0.21
MRPL55-213ENST00000366740 SYDE2Q5VT97 1194 aa13.73□□□□□ -0.21
MRPL55-213ENST00000366740 TTBK2Q6IQ55 1244 aa13.73□□□□□ -0.21
MRPL55-213ENST00000366740 SLC30A10Q6XR72 485 aa13.73□□□□□ -0.21
MRPL55-213ENST00000366740 OR6J1Q8NGC5 347 aa13.73□□□□□ -0.21
MRPL55-213ENST00000366740 CLEC4DQ8WXI8 215 aa13.73□□□□□ -0.21
MRPL55-213ENST00000366740 COG5Q9UP83 839 aa13.73□□□□□ -0.21
MRPL55-213ENST00000366740 RAD50Q92878 1312 aa13.72□□□□□ -0.21
MRPL55-213ENST00000366740 PTPDC1A2A3K4 754 aa13.72□□□□□ -0.21
MRPL55-213ENST00000366740 A6NJR5 290 aa13.72□□□□□ -0.21
MRPL55-213ENST00000366740 GTPBP6O43824 516 aaPredicted RBP13.72□□□□□ -0.21
MRPL55-213ENST00000366740 KPNA6O60684 536 aa13.72□□□□□ -0.21
MRPL55-213ENST00000366740 ARHGEF15O94989 841 aa13.72□□□□□ -0.21
MRPL55-213ENST00000366740 SLC16A2P36021 539 aa13.72□□□□□ -0.21
MRPL55-213ENST00000366740 TAP1Q03518 808 aa13.72□□□□□ -0.21
MRPL55-213ENST00000366740 PPP2R5BQ15173 497 aa13.72□□□□□ -0.21
MRPL55-213ENST00000366740 MCMDC2Q4G0Z9 681 aa13.72□□□□□ -0.21
MRPL55-213ENST00000366740 ZNF589Q86UQ0 364 aaPredicted RBP13.72□□□□□ -0.21
MRPL55-213ENST00000366740 TICAM2Q86XR7 235 aa13.72□□□□□ -0.21
MRPL55-213ENST00000366740 HERC6Q8IVU3 1022 aa13.72□□□□□ -0.21
MRPL55-213ENST00000366740 GPHNQ9NQX3 736 aaPredicted RBP13.72□□□□□ -0.21
MRPL55-213ENST00000366740 KIAA1671Q9BY89 1806 aa13.71□□□□□ -0.21
MRPL55-213ENST00000366740 WDR19Q8NEZ3 1342 aa13.71□□□□□ -0.21
MRPL55-213ENST00000366740 RANBP6O60518 1105 aaKnown RBP13.71□□□□□ -0.21
MRPL55-213ENST00000366740 BAIAP3O94812 1187 aa13.71□□□□□ -0.21
MRPL55-213ENST00000366740 TOP1P11387 765 aaKnown RBP13.71□□□□□ -0.21
MRPL55-213ENST00000366740 GSPT1P15170 499 aaKnown RBP13.71□□□□□ -0.21
MRPL55-213ENST00000366740 ALX1Q15699 326 aa13.71□□□□□ -0.21
MRPL55-213ENST00000366740 BRDTQ58F21 947 aaPredicted RBP13.71□□□□□ -0.21
MRPL55-213ENST00000366740 FAM47CQ5HY64 1035 aa13.71□□□□□ -0.21
MRPL55-213ENST00000366740 RNF207Q6ZRF8 634 aa13.71□□□□□ -0.21
MRPL55-213ENST00000366740 DNERQ8NFT8 737 aa13.71□□□□□ -0.21
MRPL55-213ENST00000366740 SCFD2Q8WU76 684 aa13.71□□□□□ -0.21
MRPL55-213ENST00000366740 FAM122AQ96E09 287 aa13.71□□□□□ -0.21
MRPL55-213ENST00000366740 TMEM47Q9BQJ4 181 aa13.71□□□□□ -0.21
MRPL55-213ENST00000366740 CERS4Q9HA82 394 aa13.71□□□□□ -0.21
MRPL55-213ENST00000366740 TCP11L1Q9NUJ3 509 aa13.71□□□□□ -0.21
MRPL55-213ENST00000366740 PNMA2Q9UL42 364 aa13.71□□□□□ -0.21
MRPL55-213ENST00000366740 MTMR7Q9Y216 660 aa13.71□□□□□ -0.21
MRPL55-213ENST00000366740 ZMYM6O95789 1325 aa13.7□□□□□ -0.22
MRPL55-213ENST00000366740 TLL1O43897 1013 aa13.7□□□□□ -0.22
MRPL55-213ENST00000366740 LPXNO60711 386 aa13.7□□□□□ -0.22
MRPL55-213ENST00000366740 PDHBP11177 359 aa13.7□□□□□ -0.22
MRPL55-213ENST00000366740 RPS6P62753 249 aaKnown RBP13.7□□□□□ -0.22
MRPL55-213ENST00000366740 PDE4DQ08499 809 aa13.7□□□□□ -0.22
MRPL55-213ENST00000366740 BFSP2Q13515 415 aa13.7□□□□□ -0.22
MRPL55-213ENST00000366740 SKIV2LQ15477 1246 aaKnown RBP13.7□□□□□ -0.22
MRPL55-213ENST00000366740 TTC22Q5TAA0 569 aa13.7□□□□□ -0.22
MRPL55-213ENST00000366740 KRT40Q6A162 431 aa13.7□□□□□ -0.22
MRPL55-213ENST00000366740 RETREG2Q8NC44 543 aa13.7□□□□□ -0.22
MRPL55-213ENST00000366740 COPS5Q92905 334 aa13.7□□□□□ -0.22
MRPL55-213ENST00000366740 MPHOSPH6Q99547 160 aaKnown RBP13.7□□□□□ -0.22
MRPL55-213ENST00000366740 ARIH1Q9Y4X5 557 aaPredicted RBP13.7□□□□□ -0.22
MRPL55-213ENST00000366740 FRMPD2Q68DX3 1309 aaPredicted RBP13.69□□□□□ -0.22
MRPL55-213ENST00000366740 ARIH2O95376 493 aa13.69□□□□□ -0.22
MRPL55-213ENST00000366740 FGAP02671 866 aa13.69□□□□□ -0.22
MRPL55-213ENST00000366740 SNHG28P0DPA3 235 aa13.69□□□□□ -0.22
MRPL55-213ENST00000366740 HSPD1P10809 573 aaKnown RBP13.69□□□□□ -0.22
MRPL55-213ENST00000366740 CALML3P27482 149 aa13.69□□□□□ -0.22
MRPL55-213ENST00000366740 RBL2Q08999 1139 aa13.69□□□□□ -0.22
MRPL55-213ENST00000366740 GRB10Q13322 594 aa13.69□□□□□ -0.22
MRPL55-213ENST00000366740 SESTD1Q86VW0 696 aa13.69□□□□□ -0.22
MRPL55-213ENST00000366740 CAGE1Q8TC20 777 aa13.69□□□□□ -0.22
MRPL55-213ENST00000366740 PPP1R13LQ8WUF5 828 aa13.69□□□□□ -0.22
MRPL55-213ENST00000366740 ARNTL2Q8WYA1 636 aa13.69□□□□□ -0.22
MRPL55-213ENST00000366740 CTAGE1Q96RT6 745 aa13.69□□□□□ -0.22
MRPL55-213ENST00000366740 GPCPD1Q9NPB8 672 aa13.69□□□□□ -0.22
MRPL55-213ENST00000366740 COL4A6Q14031 1691 aa13.69□□□□□ -0.22
MRPL55-213ENST00000366740 KIF28PB7ZC32 967 aa13.68□□□□□ -0.22
MRPL55-213ENST00000366740 TXNP10599 105 aaKnown RBP13.68□□□□□ -0.22
MRPL55-213ENST00000366740 HOXD11P31277 338 aaPredicted RBP13.68□□□□□ -0.22
MRPL55-213ENST00000366740 WDR5P61964 334 aaKnown RBP13.68□□□□□ -0.22
MRPL55-213ENST00000366740 ZNF543Q08ER8 600 aa13.68□□□□□ -0.22
MRPL55-213ENST00000366740 GPNMBQ14956 572 aa13.68□□□□□ -0.22
MRPL55-213ENST00000366740 CWC27Q6UX04 472 aaKnown RBP13.68□□□□□ -0.22
MRPL55-213ENST00000366740 SPRED2Q7Z698 418 aa13.68□□□□□ -0.22
MRPL55-213ENST00000366740 CCDC155Q8N6L0 562 aa13.68□□□□□ -0.22
MRPL55-213ENST00000366740 AFAP1L1Q8TED9 768 aa13.68□□□□□ -0.22
MRPL55-213ENST00000366740 HLA-CQ95604 372 aa13.68□□□□□ -0.22
MRPL55-213ENST00000366740 FTOQ9C0B1 505 aaKnown RBP eCLIP13.68□□□□□ -0.22
MRPL55-213ENST00000366740 MAF1Q9H063 256 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms