RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 ZC3H12DA2A288 527 aaKnown RBP4.93□□□□□ -1.62
RNU4-48P-201ENST00000365559 HRKO00198 91 aa4.93□□□□□ -1.62
RNU4-48P-201ENST00000365559 ETV2O00321 342 aaPredicted RBP4.93□□□□□ -1.62
RNU4-48P-201ENST00000365559 MSCO60682 206 aa4.93□□□□□ -1.62
RNU4-48P-201ENST00000365559 BCL6P41182 706 aa4.93□□□□□ -1.62
RNU4-48P-201ENST00000365559 SRSF3P84103 164 aaKnown RBP4.93□□□□□ -1.62
RNU4-48P-201ENST00000365559 CCDC144BQ3MJ40 725 aa4.93□□□□□ -1.62
RNU4-48P-201ENST00000365559 FAM209AQ5JX71 171 aa4.93□□□□□ -1.62
RNU4-48P-201ENST00000365559 TMC6Q7Z403 805 aa4.93□□□□□ -1.62
RNU4-48P-201ENST00000365559 NLRP10Q86W26 655 aa4.93□□□□□ -1.62
RNU4-48P-201ENST00000365559 USP33Q8TEY7 942 aa4.93□□□□□ -1.62
RNU4-48P-201ENST00000365559 KCNN1Q92952 543 aa4.93□□□□□ -1.62
RNU4-48P-201ENST00000365559 KRTAP9-2Q9BYQ4 174 aa4.93□□□□□ -1.62
RNU4-48P-201ENST00000365559 ZSWIM4Q9H7M6 989 aa4.93□□□□□ -1.62
RNU4-48P-201ENST00000365559 GCM1Q9NP62 436 aa4.93□□□□□ -1.62
RNU4-48P-201ENST00000365559 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.93□□□□□ -1.62
RNU4-48P-201ENST00000365559 MBD1Q9UIS9 605 aaPredicted RBP4.93□□□□□ -1.62
RNU4-48P-201ENST00000365559 PLA2G2DQ9UNK4 145 aa4.93□□□□□ -1.62
RNU4-48P-201ENST00000365559 CDK11AQ9UQ88 783 aaPredicted RBP4.93□□□□□ -1.62
RNU4-48P-201ENST00000365559 PCDHA2Q9Y5H9 948 aa4.93□□□□□ -1.62
RNU4-48P-201ENST00000365559 TIMM13Q9Y5L4 95 aaPredicted RBP4.93□□□□□ -1.62
RNU4-48P-201ENST00000365559 C22orf46C9J442 243 aa4.92□□□□□ -1.62
RNU4-48P-201ENST00000365559 F8W031 263 aaPredicted RBP4.92□□□□□ -1.62
RNU4-48P-201ENST00000365559 ABLIM1O14639 778 aa4.92□□□□□ -1.62
RNU4-48P-201ENST00000365559 NTRK1P04629 796 aa4.92□□□□□ -1.62
RNU4-48P-201ENST00000365559 C1QTNF9P0C862 333 aa4.92□□□□□ -1.62
RNU4-48P-201ENST00000365559 FPR2P25090 351 aa4.92□□□□□ -1.62
RNU4-48P-201ENST00000365559 MAPKAPK2P49137 400 aa4.92□□□□□ -1.62
RNU4-48P-201ENST00000365559 RPL11P62913 178 aaKnown RBP4.92□□□□□ -1.62
RNU4-48P-201ENST00000365559 DLG4P78352 724 aa4.92□□□□□ -1.62
RNU4-48P-201ENST00000365559 PRR5P85299 388 aa4.92□□□□□ -1.62
RNU4-48P-201ENST00000365559 NR1I3Q14994 352 aa4.92□□□□□ -1.62
RNU4-48P-201ENST00000365559 TMEM132EQ6IEE7 984 aa4.92□□□□□ -1.62
RNU4-48P-201ENST00000365559 KCNT2Q6UVM3 1135 aa4.92□□□□□ -1.62
RNU4-48P-201ENST00000365559 LILRB2Q8N423 598 aa4.92□□□□□ -1.62
RNU4-48P-201ENST00000365559 EXOC2Q96KP1 924 aa4.92□□□□□ -1.62
RNU4-48P-201ENST00000365559 SLC38A3Q99624 504 aa4.92□□□□□ -1.62
RNU4-48P-201ENST00000365559 CDC6Q99741 560 aa4.92□□□□□ -1.62
RNU4-48P-201ENST00000365559 PHF20Q9BVI0 1012 aa4.92□□□□□ -1.62
RNU4-48P-201ENST00000365559 CNTD2Q9H8S5 307 aa4.92□□□□□ -1.62
RNU4-48P-201ENST00000365559 SIT1Q9Y3P8 196 aa4.92□□□□□ -1.62
RNU4-48P-201ENST00000365559 TRBV23-1A0A0A0MS06 115 aa4.91□□□□□ -1.62
RNU4-48P-201ENST00000365559 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.91□□□□□ -1.62
RNU4-48P-201ENST00000365559 MYO1BO43795 1136 aa4.91□□□□□ -1.62
RNU4-48P-201ENST00000365559 SEMA7AO75326 666 aa4.91□□□□□ -1.62
RNU4-48P-201ENST00000365559 TSPAN15O95858 294 aa4.91□□□□□ -1.62
RNU4-48P-201ENST00000365559 TMEM253P0C7T8 217 aa4.91□□□□□ -1.62
RNU4-48P-201ENST00000365559 GLDCP23378 1020 aa4.91□□□□□ -1.62
RNU4-48P-201ENST00000365559 EPHB3P54753 998 aa4.91□□□□□ -1.62
RNU4-48P-201ENST00000365559 TMEM62Q0P6H9 643 aa4.91□□□□□ -1.62
RNU4-48P-201ENST00000365559 NFE2L2Q16236 605 aa4.91□□□□□ -1.62
RNU4-48P-201ENST00000365559 WWC2Q6AWC2 1192 aa4.91□□□□□ -1.62
RNU4-48P-201ENST00000365559 ZC3H14Q6PJT7 736 aaKnown RBP4.91□□□□□ -1.62
RNU4-48P-201ENST00000365559 CEP68Q76N32 757 aa4.91□□□□□ -1.62
RNU4-48P-201ENST00000365559 DPH6Q7L8W6 267 aa4.91□□□□□ -1.62
RNU4-48P-201ENST00000365559 CABP7Q86V35 215 aa4.91□□□□□ -1.62
RNU4-48P-201ENST00000365559 KRTAP19-1Q8IUB9 90 aa4.91□□□□□ -1.62
RNU4-48P-201ENST00000365559 SCUBE1Q8IWY4 988 aa4.91□□□□□ -1.62
RNU4-48P-201ENST00000365559 Q8N1Y9 231 aa4.91□□□□□ -1.62
RNU4-48P-201ENST00000365559 CHAMP1Q96JM3 812 aa4.91□□□□□ -1.62
RNU4-48P-201ENST00000365559 CDIP1Q9H305 208 aa4.91□□□□□ -1.62
RNU4-48P-201ENST00000365559 PIF1Q9H611 641 aa4.91□□□□□ -1.62
RNU4-48P-201ENST00000365559 BCAS3Q9H6U6 928 aa4.91□□□□□ -1.62
RNU4-48P-201ENST00000365559 GPR27Q9NS67 375 aa4.91□□□□□ -1.62
RNU4-48P-201ENST00000365559 SIRT5Q9NXA8 310 aa4.91□□□□□ -1.62
RNU4-48P-201ENST00000365559 X6R8D5 127 aa4.91□□□□□ -1.62
RNU4-48P-201ENST00000365559 ASXL2Q76L83 1435 aa4.9□□□□□ -1.62
RNU4-48P-201ENST00000365559 KRTAP9-6A0A140TA67 174 aa4.9□□□□□ -1.63
RNU4-48P-201ENST00000365559 C6orf222P0C671 652 aaPredicted RBP4.9□□□□□ -1.63
RNU4-48P-201ENST00000365559 MED14OSP0DP75 135 aa4.9□□□□□ -1.63
RNU4-48P-201ENST00000365559 CDR1P51861 262 aa4.9□□□□□ -1.63
RNU4-48P-201ENST00000365559 NCKAP1LP55160 1127 aa4.9□□□□□ -1.63
RNU4-48P-201ENST00000365559 ZNF200P98182 395 aaPredicted RBP4.9□□□□□ -1.63
RNU4-48P-201ENST00000365559 LSAMPQ13449 338 aa4.9□□□□□ -1.63
RNU4-48P-201ENST00000365559 PKN1Q16512 942 aa4.9□□□□□ -1.63
RNU4-48P-201ENST00000365559 OLFML2BQ68BL8 750 aa4.9□□□□□ -1.63
RNU4-48P-201ENST00000365559 STYK1Q6J9G0 422 aa4.9□□□□□ -1.63
RNU4-48P-201ENST00000365559 ATG14Q6ZNE5 492 aa4.9□□□□□ -1.63
RNU4-48P-201ENST00000365559 LDHDQ86WU2 507 aa4.9□□□□□ -1.63
RNU4-48P-201ENST00000365559 JMYQ8N9B5 988 aa4.9□□□□□ -1.63
RNU4-48P-201ENST00000365559 NETO2Q8NC67 525 aa4.9□□□□□ -1.63
RNU4-48P-201ENST00000365559 BHLHE22Q8NFJ8 381 aaPredicted RBP4.9□□□□□ -1.63
RNU4-48P-201ENST00000365559 DCAF4Q8WV16 495 aa4.9□□□□□ -1.63
RNU4-48P-201ENST00000365559 TRMT2BQ96GJ1 504 aaKnown RBP4.9□□□□□ -1.63
RNU4-48P-201ENST00000365559 TMEM169Q96HH4 297 aa4.9□□□□□ -1.63
RNU4-48P-201ENST00000365559 PPP1R16BQ96T49 567 aa4.9□□□□□ -1.63
RNU4-48P-201ENST00000365559 KRTAP4-12Q9BQ66 201 aa4.9□□□□□ -1.63
RNU4-48P-201ENST00000365559 GOLGA2P5Q9HBQ8 144 aa4.9□□□□□ -1.63
RNU4-48P-201ENST00000365559 CD320Q9NPF0 282 aa4.9□□□□□ -1.63
RNU4-48P-201ENST00000365559 PPARGC1AQ9UBK2 798 aaKnown RBP4.9□□□□□ -1.63
RNU4-48P-201ENST00000365559 DBR1Q9UK59 544 aaKnown RBP4.9□□□□□ -1.63
RNU4-48P-201ENST00000365559 NFIBO00712 420 aa4.89□□□□□ -1.63
RNU4-48P-201ENST00000365559 RAP1GAPP47736 663 aa4.89□□□□□ -1.63
RNU4-48P-201ENST00000365559 GTF2A2P52657 109 aa4.89□□□□□ -1.63
RNU4-48P-201ENST00000365559 SUMO1P63165 101 aaKnown RBP4.89□□□□□ -1.63
RNU4-48P-201ENST00000365559 LONRF2Q1L5Z9 754 aa4.89□□□□□ -1.63
RNU4-48P-201ENST00000365559 C2orf27AQ580R0 203 aa4.89□□□□□ -1.63
RNU4-48P-201ENST00000365559 RSPO2Q6UXX9 243 aaPredicted RBP4.89□□□□□ -1.63
RNU4-48P-201ENST00000365559 IGDCC3Q8IVU1 814 aa4.89□□□□□ -1.63
RNU4-48P-201ENST00000365559 THAP3Q8WTV1 239 aaPredicted RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms