RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 DENND2CQ68D51 928 aa15.28■□□□□ 0.04
COL6A1-201ENST00000361866 WDR66Q8TBY9 1149 aa15.28■□□□□ 0.04
COL6A1-201ENST00000361866 TCP11Q8WWU5 503 aa15.28■□□□□ 0.04
COL6A1-201ENST00000361866 EFCC1Q9HA90 598 aa15.28■□□□□ 0.04
COL6A1-201ENST00000361866 RIPOR2Q9Y4F9 1068 aa15.28■□□□□ 0.04
COL6A1-201ENST00000361866 FCER1AP12319 257 aa15.28■□□□□ 0.04
COL6A1-201ENST00000361866 CD44P16070 742 aaKnown RBP15.28■□□□□ 0.04
COL6A1-201ENST00000361866 SLC1A4P43007 532 aa15.28■□□□□ 0.04
COL6A1-201ENST00000361866 CYP2J2P51589 502 aa15.28■□□□□ 0.04
COL6A1-201ENST00000361866 SP4Q02446 784 aa15.28■□□□□ 0.04
COL6A1-201ENST00000361866 TMC4Q7Z404 712 aa15.28■□□□□ 0.04
COL6A1-201ENST00000361866 THAP9Q9H5L6 903 aa15.28■□□□□ 0.04
COL6A1-201ENST00000361866 NOVA2Q9UNW9 492 aaKnown RBP15.28■□□□□ 0.04
COL6A1-201ENST00000361866 PXDNLA1KZ92 1463 aa15.28■□□□□ 0.04
COL6A1-201ENST00000361866 DLC1Q96QB1 1528 aa15.28■□□□□ 0.04
COL6A1-201ENST00000361866 HMGB2P26583 209 aaKnown RBP15.28■□□□□ 0.04
COL6A1-201ENST00000361866 PRDX5P30044 214 aa15.28■□□□□ 0.04
COL6A1-201ENST00000361866 SLCO1A2P46721 670 aa15.28■□□□□ 0.04
COL6A1-201ENST00000361866 BEND6Q5SZJ8 279 aaPredicted RBP15.28■□□□□ 0.04
COL6A1-201ENST00000361866 SLC44A5Q8NCS7 719 aa15.28■□□□□ 0.04
COL6A1-201ENST00000361866 NUCKS1Q9H1E3 243 aaKnown RBP15.28■□□□□ 0.04
COL6A1-201ENST00000361866 SWAP70Q9UH65 585 aa15.28■□□□□ 0.04
COL6A1-201ENST00000361866 KIDINS220Q9ULH0 1771 aa15.28■□□□□ 0.04
COL6A1-201ENST00000361866 LRRC53A6NM62 1247 aa15.28■□□□□ 0.04
COL6A1-201ENST00000361866 DDX39AO00148 427 aaKnown RBP15.28■□□□□ 0.04
COL6A1-201ENST00000361866 EXOC3O60645 756 aa15.28■□□□□ 0.04
COL6A1-201ENST00000361866 FKBP3Q00688 224 aaKnown RBP15.28■□□□□ 0.04
COL6A1-201ENST00000361866 PIGSQ96S52 555 aa15.28■□□□□ 0.04
COL6A1-201ENST00000361866 NYXQ9GZU5 481 aa15.28■□□□□ 0.04
COL6A1-201ENST00000361866 ABCC12Q96J65 1359 aa15.28■□□□□ 0.04
COL6A1-201ENST00000361866 UTYO14607 1347 aa15.27■□□□□ 0.04
COL6A1-201ENST00000361866 NR2F2P24468 414 aa15.27■□□□□ 0.04
COL6A1-201ENST00000361866 PABPC4Q13310 644 aaKnown RBP eCLIP15.27■□□□□ 0.04
COL6A1-201ENST00000361866 PRR16Q569H4 304 aa15.27■□□□□ 0.04
COL6A1-201ENST00000361866 HAUS3Q68CZ6 603 aa15.27■□□□□ 0.04
COL6A1-201ENST00000361866 ISCA1Q9BUE6 129 aa15.27■□□□□ 0.04
COL6A1-201ENST00000361866 EPB41L4AQ9HCS5 686 aaPredicted RBP15.27■□□□□ 0.04
COL6A1-201ENST00000361866 NKIRAS1Q9NYS0 192 aa15.27■□□□□ 0.04
COL6A1-201ENST00000361866 ZNF335Q9H4Z2 1342 aaPredicted RBP15.27■□□□□ 0.04
COL6A1-201ENST00000361866 CPDO75976 1380 aa15.27■□□□□ 0.04
COL6A1-201ENST00000361866 A0A0U1RQJ8 604 aa15.27■□□□□ 0.04
COL6A1-201ENST00000361866 TXNRD1Q16881 649 aa15.27■□□□□ 0.04
COL6A1-201ENST00000361866 RTCBQ9Y3I0 505 aaKnown RBP15.27■□□□□ 0.04
COL6A1-201ENST00000361866 CD2APQ9Y5K6 639 aa15.27■□□□□ 0.04
COL6A1-201ENST00000361866 DHX9Q08211 1270 aaKnown RBP15.27■□□□□ 0.03
COL6A1-201ENST00000361866 FBXW10Q5XX13 1052 aa15.27■□□□□ 0.03
COL6A1-201ENST00000361866 VSIG1Q86XK7 387 aa15.27■□□□□ 0.03
COL6A1-201ENST00000361866 MICAL1Q8TDZ2 1067 aa15.27■□□□□ 0.03
COL6A1-201ENST00000361866 NAP1L3Q99457 506 aaPredicted RBP15.27■□□□□ 0.03
COL6A1-201ENST00000361866 ATP8A2Q9NTI2 1148 aa15.27■□□□□ 0.03
COL6A1-201ENST00000361866 HPSEQ9Y251 543 aa15.27■□□□□ 0.03
COL6A1-201ENST00000361866 POTEMA6NI47 508 aa15.26■□□□□ 0.03
COL6A1-201ENST00000361866 PALMO75781 387 aa15.26■□□□□ 0.03
COL6A1-201ENST00000361866 PLTPP55058 493 aa15.26■□□□□ 0.03
COL6A1-201ENST00000361866 LACTBP83111 547 aaPredicted RBP15.26■□□□□ 0.03
COL6A1-201ENST00000361866 EXOC3L4Q17RC7 722 aa15.26■□□□□ 0.03
COL6A1-201ENST00000361866 PROCA1Q8NCQ7 364 aaPredicted RBP15.26■□□□□ 0.03
COL6A1-201ENST00000361866 SPATA4Q8NEY3 305 aa15.26■□□□□ 0.03
COL6A1-201ENST00000361866 DUSP10Q9Y6W6 482 aa15.26■□□□□ 0.03
COL6A1-201ENST00000361866 WDR19Q8NEZ3 1342 aa15.26■□□□□ 0.03
COL6A1-201ENST00000361866 CTNND1O60716 968 aaKnown RBP15.26■□□□□ 0.03
COL6A1-201ENST00000361866 KLK7P49862 253 aa15.26■□□□□ 0.03
COL6A1-201ENST00000361866 TOB1P50616 345 aaPredicted RBP15.26■□□□□ 0.03
COL6A1-201ENST00000361866 MTMR3Q13615 1198 aa15.26■□□□□ 0.03
COL6A1-201ENST00000361866 FAM98CQ17RN3 349 aaKnown RBP15.26■□□□□ 0.03
COL6A1-201ENST00000361866 MMS22LQ6ZRQ5 1243 aa15.26■□□□□ 0.03
COL6A1-201ENST00000361866 TPH2Q8IWU9 490 aa15.26■□□□□ 0.03
COL6A1-201ENST00000361866 OSBPL9Q96SU4 736 aa15.26■□□□□ 0.03
COL6A1-201ENST00000361866 SLC16A2P36021 539 aa15.26■□□□□ 0.03
COL6A1-201ENST00000361866 GUCY1A3Q02108 690 aa15.26■□□□□ 0.03
COL6A1-201ENST00000361866 MECOMQ03112 1051 aa15.26■□□□□ 0.03
COL6A1-201ENST00000361866 ZYXQ15942 572 aaKnown RBP15.26■□□□□ 0.03
COL6A1-201ENST00000361866 INTS8Q75QN2 995 aaKnown RBP15.26■□□□□ 0.03
COL6A1-201ENST00000361866 MS4A14Q96JA4 679 aa15.26■□□□□ 0.03
COL6A1-201ENST00000361866 MEIS1O00470 390 aa15.25■□□□□ 0.03
COL6A1-201ENST00000361866 CLIC2O15247 247 aa15.25■□□□□ 0.03
COL6A1-201ENST00000361866 KRT5P13647 590 aa15.25■□□□□ 0.03
COL6A1-201ENST00000361866 CRKLP46109 303 aaKnown RBP15.25■□□□□ 0.03
COL6A1-201ENST00000361866 ERVK-24P63145 666 aa15.25■□□□□ 0.03
COL6A1-201ENST00000361866 MFSD14BQ5SR56 506 aa15.25■□□□□ 0.03
COL6A1-201ENST00000361866 EMBQ6PCB8 327 aa15.25■□□□□ 0.03
COL6A1-201ENST00000361866 SRBD1Q8N5C6 995 aaKnown RBP15.25■□□□□ 0.03
COL6A1-201ENST00000361866 EHD2Q9NZN4 543 aa15.25■□□□□ 0.03
COL6A1-201ENST00000361866 DDX25Q9UHL0 483 aaKnown RBP15.25■□□□□ 0.03
COL6A1-201ENST00000361866 CALUO43852 315 aaPredicted RBP15.25■□□□□ 0.03
COL6A1-201ENST00000361866 KRT14P02533 472 aa15.25■□□□□ 0.03
COL6A1-201ENST00000361866 DPYDQ12882 1025 aa15.25■□□□□ 0.03
COL6A1-201ENST00000361866 LZTS2Q9BRK4 669 aa15.25■□□□□ 0.03
COL6A1-201ENST00000361866 PSTPIP2Q9H939 334 aa15.25■□□□□ 0.03
COL6A1-201ENST00000361866 L1RE1Q9UN81 338 aa15.25■□□□□ 0.03
COL6A1-201ENST00000361866 LRRIQ3A6PVS8 624 aaPredicted RBP15.25■□□□□ 0.03
COL6A1-201ENST00000361866 ARL6IP4Q66PJ3 421 aaKnown RBP15.25■□□□□ 0.03
COL6A1-201ENST00000361866 CAPN12Q6ZSI9 719 aa15.25■□□□□ 0.03
COL6A1-201ENST00000361866 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.25■□□□□ 0.03
COL6A1-201ENST00000361866 PTPN22Q9Y2R2 807 aa15.25■□□□□ 0.03
COL6A1-201ENST00000361866 IKBKGQ9Y6K9 419 aa15.25■□□□□ 0.03
COL6A1-201ENST00000361866 NCAPD2Q15021 1401 aa15.25■□□□□ 0.03
COL6A1-201ENST00000361866 VWDEQ8N2E2 1590 aa15.25■□□□□ 0.03
COL6A1-201ENST00000361866 ACTN3Q08043 901 aaPredicted RBP15.25■□□□□ 0.03
COL6A1-201ENST00000361866 SETDB1Q15047 1291 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms