RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 ATP1A1P05023 1023 aaKnown RBP15.24■□□□□ 0.03
SMC5-201ENST00000361138 CCDC14Q49A88 953 aa15.24■□□□□ 0.03
SMC5-201ENST00000361138 METTL14Q9HCE5 456 aaKnown RBP15.24■□□□□ 0.03
SMC5-201ENST00000361138 STK36Q9NRP7 1315 aa15.24■□□□□ 0.03
SMC5-201ENST00000361138 KIF28PB7ZC32 967 aa15.24■□□□□ 0.03
SMC5-201ENST00000361138 PCCAP05165 728 aaPredicted RBP15.24■□□□□ 0.03
SMC5-201ENST00000361138 SMTNP53814 917 aa15.24■□□□□ 0.03
SMC5-201ENST00000361138 ACTN3Q08043 901 aaPredicted RBP15.24■□□□□ 0.03
SMC5-201ENST00000361138 PNMA1Q8ND90 353 aa15.24■□□□□ 0.03
SMC5-201ENST00000361138 LARP4BQ92615 738 aaKnown RBP15.24■□□□□ 0.03
SMC5-201ENST00000361138 FAM212AQ96EL1 285 aa15.24■□□□□ 0.03
SMC5-201ENST00000361138 RIC8AQ9NPQ8 531 aa15.24■□□□□ 0.03
SMC5-201ENST00000361138 GMNCA6NCL1 334 aa15.24■□□□□ 0.03
SMC5-201ENST00000361138 DCAF8L1A6NGE4 600 aa15.24■□□□□ 0.03
SMC5-201ENST00000361138 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.24■□□□□ 0.03
SMC5-201ENST00000361138 HVCN1Q96D96 273 aa15.24■□□□□ 0.03
SMC5-201ENST00000361138 PSMD1Q99460 953 aa15.24■□□□□ 0.03
SMC5-201ENST00000361138 NCAPGQ9BPX3 1015 aa15.24■□□□□ 0.03
SMC5-201ENST00000361138 ZMYND12Q9H0C1 365 aa15.24■□□□□ 0.03
SMC5-201ENST00000361138 NEK9Q8TD19 979 aa15.24■□□□□ 0.03
SMC5-201ENST00000361138 ZSWIM5Q9P217 1185 aa15.24■□□□□ 0.03
SMC5-201ENST00000361138 LIFRP42702 1097 aa15.23■□□□□ 0.03
SMC5-201ENST00000361138 PHKA1P46020 1223 aa15.23■□□□□ 0.03
SMC5-201ENST00000361138 DPH6Q7L8W6 267 aa15.23■□□□□ 0.03
SMC5-201ENST00000361138 DDX25Q9UHL0 483 aaKnown RBP15.23■□□□□ 0.03
SMC5-201ENST00000361138 ABCC3O15438 1527 aa15.23■□□□□ 0.03
SMC5-201ENST00000361138 WDR19Q8NEZ3 1342 aa15.23■□□□□ 0.03
SMC5-201ENST00000361138 H2AFXP16104 143 aaPredicted RBP15.23■□□□□ 0.03
SMC5-201ENST00000361138 ARHGEF18Q6ZSZ5 1173 aa15.23■□□□□ 0.03
SMC5-201ENST00000361138 CCDC89Q8N998 374 aa15.23■□□□□ 0.03
SMC5-201ENST00000361138 MAGOHBQ96A72 148 aaKnown RBP15.23■□□□□ 0.03
SMC5-201ENST00000361138 SLC24A3Q9HC58 644 aa15.23■□□□□ 0.03
SMC5-201ENST00000361138 EFCAB6Q5THR3 1501 aa15.23■□□□□ 0.03
SMC5-201ENST00000361138 OSBPL9Q96SU4 736 aa15.23■□□□□ 0.03
SMC5-201ENST00000361138 FMO2Q99518 471 aa15.23■□□□□ 0.03
SMC5-201ENST00000361138 L2HGDHQ9H9P8 463 aa15.23■□□□□ 0.03
SMC5-201ENST00000361138 COL4A3BPQ9Y5P4 624 aa15.23■□□□□ 0.03
SMC5-201ENST00000361138 HECW2Q9P2P5 1572 aa15.23■□□□□ 0.03
SMC5-201ENST00000361138 ARHGAP42A6NI28 874 aa15.23■□□□□ 0.03
SMC5-201ENST00000361138 BCAMP50895 628 aa15.23■□□□□ 0.03
SMC5-201ENST00000361138 CYP2J2P51589 502 aa15.23■□□□□ 0.03
SMC5-201ENST00000361138 TPD52P55327 224 aaPredicted RBP15.23■□□□□ 0.03
SMC5-201ENST00000361138 NDST4Q9H3R1 872 aa15.23■□□□□ 0.03
SMC5-201ENST00000361138 ATG3Q9NT62 314 aa15.23■□□□□ 0.03
SMC5-201ENST00000361138 SCOCQ9UIL1 159 aa15.23■□□□□ 0.03
SMC5-201ENST00000361138 PALM2Q8IXS6 379 aa15.23■□□□□ 0.03
SMC5-201ENST00000361138 HPCAL4Q9UM19 191 aa15.23■□□□□ 0.03
SMC5-201ENST00000361138 PALMO75781 387 aa15.22■□□□□ 0.03
SMC5-201ENST00000361138 SLMAPQ14BN4 828 aa15.22■□□□□ 0.03
SMC5-201ENST00000361138 C6orf118Q5T5N4 469 aa15.22■□□□□ 0.03
SMC5-201ENST00000361138 ATP8A2Q9NTI2 1148 aa15.22■□□□□ 0.03
SMC5-201ENST00000361138 PKD2L1Q9P0L9 805 aa15.22■□□□□ 0.03
SMC5-201ENST00000361138 TMEM2Q9UHN6 1383 aa15.22■□□□□ 0.03
SMC5-201ENST00000361138 MMEP08473 750 aa15.22■□□□□ 0.03
SMC5-201ENST00000361138 BEND6Q5SZJ8 279 aaPredicted RBP15.22■□□□□ 0.03
SMC5-201ENST00000361138 FBXW10Q5XX13 1052 aa15.22■□□□□ 0.03
SMC5-201ENST00000361138 TGFBRAP1Q8WUH2 860 aa15.22■□□□□ 0.03
SMC5-201ENST00000361138 ATP6V1G3Q96LB4 118 aa15.22■□□□□ 0.03
SMC5-201ENST00000361138 MLXIPQ9HAP2 919 aa15.22■□□□□ 0.03
SMC5-201ENST00000361138 PCDHA12Q9UN75 941 aa15.22■□□□□ 0.03
SMC5-201ENST00000361138 METP08581 1390 aa15.22■□□□□ 0.03
SMC5-201ENST00000361138 DR1Q01658 176 aa15.22■□□□□ 0.03
SMC5-201ENST00000361138 TPTE2Q6XPS3 522 aa15.22■□□□□ 0.03
SMC5-201ENST00000361138 SMCR8Q8TEV9 937 aaPredicted RBP15.22■□□□□ 0.03
SMC5-201ENST00000361138 FUCA2Q9BTY2 467 aa15.22■□□□□ 0.03
SMC5-201ENST00000361138 SUFUQ9UMX1 484 aa15.22■□□□□ 0.03
SMC5-201ENST00000361138 GDAQ9Y2T3 454 aa15.22■□□□□ 0.03
SMC5-201ENST00000361138 AFPP02771 609 aaKnown RBP15.22■□□□□ 0.03
SMC5-201ENST00000361138 SLCO1A2P46721 670 aa15.22■□□□□ 0.03
SMC5-201ENST00000361138 VPS41P49754 854 aa15.22■□□□□ 0.03
SMC5-201ENST00000361138 MAEAQ7L5Y9 396 aa15.22■□□□□ 0.03
SMC5-201ENST00000361138 CFAP61Q8NHU2 1237 aa15.22■□□□□ 0.03
SMC5-201ENST00000361138 RASGRP4Q8TDF6 673 aa15.22■□□□□ 0.03
SMC5-201ENST00000361138 FBXO41Q8TF61 875 aa15.22■□□□□ 0.03
SMC5-201ENST00000361138 TRIM6Q9C030 488 aaPredicted RBP15.22■□□□□ 0.03
SMC5-201ENST00000361138 TFCP2L1Q9NZI6 479 aa15.22■□□□□ 0.03
SMC5-201ENST00000361138 PLEKHG1Q9ULL1 1385 aa15.22■□□□□ 0.03
SMC5-201ENST00000361138 CASP1P29466 404 aa15.21■□□□□ 0.03
SMC5-201ENST00000361138 ADCY2Q08462 1091 aa15.21■□□□□ 0.03
SMC5-201ENST00000361138 METTL16Q86W50 562 aaKnown RBP15.21■□□□□ 0.03
SMC5-201ENST00000361138 RNF168Q8IYW5 571 aaPredicted RBP15.21■□□□□ 0.03
SMC5-201ENST00000361138 ELAC2Q9BQ52 826 aaKnown RBP15.21■□□□□ 0.03
SMC5-201ENST00000361138 TCHPQ9BT92 498 aa15.21■□□□□ 0.03
SMC5-201ENST00000361138 ATP10DQ9P241 1426 aa15.21■□□□□ 0.03
SMC5-201ENST00000361138 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.21■□□□□ 0.03
SMC5-201ENST00000361138 EIF3HO15372 352 aaKnown RBP eCLIP15.21■□□□□ 0.03
SMC5-201ENST00000361138 AP5Z1O43299 807 aa15.21■□□□□ 0.03
SMC5-201ENST00000361138 CORO7P57737 925 aa15.21■□□□□ 0.03
SMC5-201ENST00000361138 RNASELQ05823 741 aaKnown RBP15.21■□□□□ 0.03
SMC5-201ENST00000361138 SEPT2Q15019 361 aa15.21■□□□□ 0.03
SMC5-201ENST00000361138 DISC1Q9NRI5 854 aa15.21■□□□□ 0.03
SMC5-201ENST00000361138 SOS2Q07890 1332 aaPredicted RBP15.21■□□□□ 0.03
SMC5-201ENST00000361138 FOXN1O15353 648 aa15.21■□□□□ 0.03
SMC5-201ENST00000361138 LTKP29376 864 aa15.21■□□□□ 0.03
SMC5-201ENST00000361138 CDC25AP30304 524 aa15.21■□□□□ 0.03
SMC5-201ENST00000361138 MAN1A1P33908 653 aa15.21■□□□□ 0.03
SMC5-201ENST00000361138 PPP2R2AP63151 447 aa15.21■□□□□ 0.03
SMC5-201ENST00000361138 DRP2Q13474 957 aa15.21■□□□□ 0.03
SMC5-201ENST00000361138 LRRC41Q15345 812 aa15.21■□□□□ 0.03
SMC5-201ENST00000361138 RDH13Q8NBN7 331 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms