RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 ATP6V1G3Q96LB4 118 aa16.53■□□□□ 0.24
UBAP1-202ENST00000359544 BRIP1Q9BX63 1249 aa16.53■□□□□ 0.24
UBAP1-202ENST00000359544 ZSWIM5Q9P217 1185 aa16.53■□□□□ 0.24
UBAP1-202ENST00000359544 TRMT112Q9UI30 125 aaKnown RBP16.53■□□□□ 0.24
UBAP1-202ENST00000359544 NRXN2Q9P2S2 1712 aa16.53■□□□□ 0.24
UBAP1-202ENST00000359544 MYH13Q9UKX3 1938 aa16.53■□□□□ 0.24
UBAP1-202ENST00000359544 ZNF233A6NK53 670 aa16.53■□□□□ 0.24
UBAP1-202ENST00000359544 RPN1P04843 607 aaKnown RBP16.53■□□□□ 0.24
UBAP1-202ENST00000359544 SRGNP10124 158 aa16.53■□□□□ 0.24
UBAP1-202ENST00000359544 MATR3P43243 847 aaKnown RBP eCLIP16.53■□□□□ 0.24
UBAP1-202ENST00000359544 PPARAQ07869 468 aa16.53■□□□□ 0.24
UBAP1-202ENST00000359544 NOC3LQ8WTT2 800 aaKnown RBP16.53■□□□□ 0.24
UBAP1-202ENST00000359544 STAMQ92783 540 aa16.53■□□□□ 0.24
UBAP1-202ENST00000359544 SGSM3Q96HU1 749 aa16.53■□□□□ 0.24
UBAP1-202ENST00000359544 FAXDC2Q96IV6 333 aa16.53■□□□□ 0.24
UBAP1-202ENST00000359544 TTYH3Q9C0H2 523 aa16.53■□□□□ 0.24
UBAP1-202ENST00000359544 DUSP10Q9Y6W6 482 aa16.53■□□□□ 0.24
UBAP1-202ENST00000359544 ANKRD31Q8N7Z5 1873 aa16.52■□□□□ 0.24
UBAP1-202ENST00000359544 E7EVH7 732 aa16.52■□□□□ 0.24
UBAP1-202ENST00000359544 H0YIN7 160 aa16.52■□□□□ 0.24
UBAP1-202ENST00000359544 WTAPQ15007 396 aa16.52■□□□□ 0.24
UBAP1-202ENST00000359544 CCDC57Q2TAC2 916 aa16.52■□□□□ 0.24
UBAP1-202ENST00000359544 PDXDC2PQ6P474 469 aa16.52■□□□□ 0.24
UBAP1-202ENST00000359544 CEP57Q86XR8 500 aa16.52■□□□□ 0.24
UBAP1-202ENST00000359544 IRF2BP1Q8IU81 584 aa16.52■□□□□ 0.24
UBAP1-202ENST00000359544 TMTC2Q8N394 836 aa16.52■□□□□ 0.24
UBAP1-202ENST00000359544 SH2D4AQ9H788 454 aa16.52■□□□□ 0.24
UBAP1-202ENST00000359544 ATP6V0A4Q9HBG4 840 aa16.52■□□□□ 0.24
UBAP1-202ENST00000359544 EXOC1Q9NV70 894 aa16.52■□□□□ 0.24
UBAP1-202ENST00000359544 ERICH2A1L162 156 aa16.52■□□□□ 0.23
UBAP1-202ENST00000359544 PRCPP42785 496 aa16.52■□□□□ 0.23
UBAP1-202ENST00000359544 IQCDQ96DY2 449 aa16.52■□□□□ 0.23
UBAP1-202ENST00000359544 CCDC42Q96M95 316 aa16.52■□□□□ 0.23
UBAP1-202ENST00000359544 GDF3Q9NR23 364 aa16.52■□□□□ 0.23
UBAP1-202ENST00000359544 PIM2Q9P1W9 311 aa16.52■□□□□ 0.23
UBAP1-202ENST00000359544 LRWD1Q9UFC0 647 aa16.52■□□□□ 0.23
UBAP1-202ENST00000359544 DDX20Q9UHI6 824 aaKnown RBP16.52■□□□□ 0.23
UBAP1-202ENST00000359544 KIF13BQ9NQT8 1826 aa16.51■□□□□ 0.23
UBAP1-202ENST00000359544 CLNS1AP54105 237 aaKnown RBP16.51■□□□□ 0.23
UBAP1-202ENST00000359544 FUKQ8N0W3 1084 aa16.51■□□□□ 0.23
UBAP1-202ENST00000359544 CYFIP2Q96F07 1278 aa16.51■□□□□ 0.23
UBAP1-202ENST00000359544 MTA3Q9BTC8 594 aa16.51■□□□□ 0.23
UBAP1-202ENST00000359544 ISCA1Q9BUE6 129 aa16.51■□□□□ 0.23
UBAP1-202ENST00000359544 RNF26Q9BY78 433 aaPredicted RBP16.51■□□□□ 0.23
UBAP1-202ENST00000359544 TRIM6Q9C030 488 aaPredicted RBP16.51■□□□□ 0.23
UBAP1-202ENST00000359544 RNF14Q9UBS8 474 aa16.51■□□□□ 0.23
UBAP1-202ENST00000359544 DCAF8L1A6NGE4 600 aa16.51■□□□□ 0.23
UBAP1-202ENST00000359544 GOLGA6L10A6NI86 522 aa16.51■□□□□ 0.23
UBAP1-202ENST00000359544 NEBLO76041 1014 aa16.51■□□□□ 0.23
UBAP1-202ENST00000359544 SEC24CP53992 1094 aa16.51■□□□□ 0.23
UBAP1-202ENST00000359544 P3H4Q92791 437 aa16.51■□□□□ 0.23
UBAP1-202ENST00000359544 AGPAT5Q9NUQ2 364 aa16.51■□□□□ 0.23
UBAP1-202ENST00000359544 TSKSQ9UJT2 592 aa16.51■□□□□ 0.23
UBAP1-202ENST00000359544 A0A1W2PQJ5 194 aa16.5■□□□□ 0.23
UBAP1-202ENST00000359544 IRX1P78414 480 aaPredicted RBP16.5■□□□□ 0.23
UBAP1-202ENST00000359544 ATP2B2Q01814 1243 aa16.5■□□□□ 0.23
UBAP1-202ENST00000359544 CYP27A1Q02318 531 aa16.5■□□□□ 0.23
UBAP1-202ENST00000359544 ITGB3BPQ13352 177 aaPredicted RBP16.5■□□□□ 0.23
UBAP1-202ENST00000359544 ADSSL1Q8N142 457 aa16.5■□□□□ 0.23
UBAP1-202ENST00000359544 CCDC82Q8N4S0 544 aa16.5■□□□□ 0.23
UBAP1-202ENST00000359544 WHAMMQ8TF30 809 aa16.5■□□□□ 0.23
UBAP1-202ENST00000359544 IFIH1Q9BYX4 1025 aaKnown RBP16.5■□□□□ 0.23
UBAP1-202ENST00000359544 CAPN6Q9Y6Q1 641 aa16.5■□□□□ 0.23
UBAP1-202ENST00000359544 TIAM2Q8IVF5 1701 aa16.5■□□□□ 0.23
UBAP1-202ENST00000359544 TNRC6CQ9HCJ0 1690 aaKnown RBP16.5■□□□□ 0.23
UBAP1-202ENST00000359544 PDE6BP35913 854 aa16.5■□□□□ 0.23
UBAP1-202ENST00000359544 ATP2C1P98194 919 aaPredicted RBP16.5■□□□□ 0.23
UBAP1-202ENST00000359544 CTDSPL2Q05D32 466 aa16.5■□□□□ 0.23
UBAP1-202ENST00000359544 FIGNQ5HY92 759 aa16.5■□□□□ 0.23
UBAP1-202ENST00000359544 NFRKBQ6P4R8 1299 aa16.5■□□□□ 0.23
UBAP1-202ENST00000359544 PI16Q6UXB8 463 aa16.5■□□□□ 0.23
UBAP1-202ENST00000359544 ARMC9Q7Z3E5 817 aa16.5■□□□□ 0.23
UBAP1-202ENST00000359544 NAPBQ9H115 298 aa16.5■□□□□ 0.23
UBAP1-202ENST00000359544 GDAQ9Y2T3 454 aa16.5■□□□□ 0.23
UBAP1-202ENST00000359544 CHD4Q14839 1912 aa16.5■□□□□ 0.23
UBAP1-202ENST00000359544 FAM205CA6NFA0 338 aa16.49■□□□□ 0.23
UBAP1-202ENST00000359544 PPP2R5BQ15173 497 aa16.49■□□□□ 0.23
UBAP1-202ENST00000359544 CFAP221Q4G0U5 840 aa16.49■□□□□ 0.23
UBAP1-202ENST00000359544 DALRD3Q5D0E6 543 aaKnown RBP16.49■□□□□ 0.23
UBAP1-202ENST00000359544 TTC38Q5R3I4 469 aa16.49■□□□□ 0.23
UBAP1-202ENST00000359544 AKNAD1Q5T1N1 836 aa16.49■□□□□ 0.23
UBAP1-202ENST00000359544 TRIM47Q96LD4 638 aa16.49■□□□□ 0.23
UBAP1-202ENST00000359544 CCDC85AQ96PX6 553 aaPredicted RBP16.49■□□□□ 0.23
UBAP1-202ENST00000359544 PHF20Q9BVI0 1012 aa16.49■□□□□ 0.23
UBAP1-202ENST00000359544 RBM28Q9NW13 759 aaKnown RBP16.49■□□□□ 0.23
UBAP1-202ENST00000359544 ANKRD18BA2A2Z9 1011 aa16.49■□□□□ 0.23
UBAP1-202ENST00000359544 B4DLN1 442 aa16.49■□□□□ 0.23
UBAP1-202ENST00000359544 SEMA3FQ13275 785 aa16.49■□□□□ 0.23
UBAP1-202ENST00000359544 NBPF9Q3BBW0 867 aa16.49■□□□□ 0.23
UBAP1-202ENST00000359544 PARP10Q53GL7 1025 aa16.49■□□□□ 0.23
UBAP1-202ENST00000359544 MFSD6Q6ZSS7 791 aa16.49■□□□□ 0.23
UBAP1-202ENST00000359544 FANCBQ8NB91 859 aa16.49■□□□□ 0.23
UBAP1-202ENST00000359544 SCLT1Q96NL6 688 aa16.49■□□□□ 0.23
UBAP1-202ENST00000359544 NYXQ9GZU5 481 aa16.49■□□□□ 0.23
UBAP1-202ENST00000359544 NFU1Q9UMS0 254 aa16.49■□□□□ 0.23
UBAP1-202ENST00000359544 PCDHA13Q9Y5I0 950 aa16.49■□□□□ 0.23
UBAP1-202ENST00000359544 ZNF532Q9HCE3 1301 aa16.49■□□□□ 0.23
UBAP1-202ENST00000359544 COL11A2P13942 1736 aaPredicted RBP16.49■□□□□ 0.23
UBAP1-202ENST00000359544 GMNCA6NCL1 334 aa16.48■□□□□ 0.23
UBAP1-202ENST00000359544 TRIM49BA6NDI0 452 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms