RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 MYPNQ86TC9 1320 aa15.72■□□□□ 0.11
PDLIM5-203ENST00000359265 SYCE3A1L190 88 aa15.72■□□□□ 0.11
PDLIM5-203ENST00000359265 USP17L15C9J2P7 530 aa15.72■□□□□ 0.11
PDLIM5-203ENST00000359265 USP17L13C9JLJ4 530 aa15.72■□□□□ 0.11
PDLIM5-203ENST00000359265 USP17L11C9JVI0 530 aa15.72■□□□□ 0.11
PDLIM5-203ENST00000359265 USP17L18D6R9N7 530 aa15.72■□□□□ 0.11
PDLIM5-203ENST00000359265 USP17L22D6RA61 530 aa15.72■□□□□ 0.11
PDLIM5-203ENST00000359265 USP17L17D6RBQ6 530 aa15.72■□□□□ 0.11
PDLIM5-203ENST00000359265 USP17L19D6RCP7 530 aa15.72■□□□□ 0.11
PDLIM5-203ENST00000359265 USP17L20D6RJB6 530 aa15.72■□□□□ 0.11
PDLIM5-203ENST00000359265 PFKFB1P16118 471 aa15.72■□□□□ 0.11
PDLIM5-203ENST00000359265 GTF2A2P52657 109 aa15.72■□□□□ 0.11
PDLIM5-203ENST00000359265 USP17L24Q0WX57 530 aa15.72■□□□□ 0.11
PDLIM5-203ENST00000359265 PABPC4Q13310 644 aaKnown RBP eCLIP15.72■□□□□ 0.11
PDLIM5-203ENST00000359265 LETM2Q2VYF4 491 aa15.72■□□□□ 0.11
PDLIM5-203ENST00000359265 SHC4Q6S5L8 630 aa15.72■□□□□ 0.11
PDLIM5-203ENST00000359265 GADL1Q6ZQY3 521 aa15.72■□□□□ 0.11
PDLIM5-203ENST00000359265 CLIC6Q96NY7 704 aa15.72■□□□□ 0.11
PDLIM5-203ENST00000359265 ANO3Q9BYT9 981 aa15.72■□□□□ 0.11
PDLIM5-203ENST00000359265 TNMDQ9H2S6 317 aa15.72■□□□□ 0.11
PDLIM5-203ENST00000359265 SLC38A10Q9HBR0 1119 aa15.72■□□□□ 0.11
PDLIM5-203ENST00000359265 RANBP2P49792 3224 aaKnown RBP15.71■□□□□ 0.11
PDLIM5-203ENST00000359265 FAM237AA0A1B0GTK4 181 aa15.71■□□□□ 0.11
PDLIM5-203ENST00000359265 A0A1B0GVL5 298 aa15.71■□□□□ 0.11
PDLIM5-203ENST00000359265 SPDYE3A6NKU9 549 aa15.71■□□□□ 0.11
PDLIM5-203ENST00000359265 PIK3CDO00329 1044 aa15.71■□□□□ 0.11
PDLIM5-203ENST00000359265 MEIS2O14770 477 aa15.71■□□□□ 0.11
PDLIM5-203ENST00000359265 CTAGE5O15320 804 aa15.71■□□□□ 0.11
PDLIM5-203ENST00000359265 NEMFO60524 1076 aa15.71■□□□□ 0.11
PDLIM5-203ENST00000359265 CCNT1O60563 726 aaKnown RBP15.71■□□□□ 0.11
PDLIM5-203ENST00000359265 GCFC2P16383 781 aaKnown RBP15.71■□□□□ 0.11
PDLIM5-203ENST00000359265 TAL1P17542 331 aaPredicted RBP15.71■□□□□ 0.11
PDLIM5-203ENST00000359265 MKRN3Q13064 507 aaKnown RBP15.71■□□□□ 0.11
PDLIM5-203ENST00000359265 USP17L6PQ6QN14 398 aa15.71■□□□□ 0.11
PDLIM5-203ENST00000359265 CATSPERGQ6ZRH7 1159 aa15.71■□□□□ 0.11
PDLIM5-203ENST00000359265 FMR1NBQ8N0W7 255 aaPredicted RBP15.71■□□□□ 0.11
PDLIM5-203ENST00000359265 ENGASEQ8NFI3 743 aa15.71■□□□□ 0.11
PDLIM5-203ENST00000359265 CFHR5Q9BXR6 569 aa15.71■□□□□ 0.11
PDLIM5-203ENST00000359265 EHMT1Q9H9B1 1298 aa15.71■□□□□ 0.11
PDLIM5-203ENST00000359265 MRVI1Q9Y6F6 885 aa15.71■□□□□ 0.11
PDLIM5-203ENST00000359265 ZNF536O15090 1300 aa15.7■□□□□ 0.1
PDLIM5-203ENST00000359265 CETPP11597 493 aa15.7■□□□□ 0.1
PDLIM5-203ENST00000359265 PRPHP41219 470 aa15.7■□□□□ 0.1
PDLIM5-203ENST00000359265 SYKP43405 635 aa15.7■□□□□ 0.1
PDLIM5-203ENST00000359265 NDUFA8P51970 172 aa15.7■□□□□ 0.1
PDLIM5-203ENST00000359265 COG2Q14746 738 aa15.7■□□□□ 0.1
PDLIM5-203ENST00000359265 ARMC5Q96C12 935 aa15.7■□□□□ 0.1
PDLIM5-203ENST00000359265 ATG4CQ96DT6 458 aa15.7■□□□□ 0.1
PDLIM5-203ENST00000359265 HOXC10Q9NYD6 342 aa15.7■□□□□ 0.1
PDLIM5-203ENST00000359265 AGTPBP1Q9UPW5 1226 aa15.7■□□□□ 0.1
PDLIM5-203ENST00000359265 VWA3AA6NCI4 1184 aa15.69■□□□□ 0.1
PDLIM5-203ENST00000359265 GCOM1H8Y6P7 765 aaPredicted RBP15.69■□□□□ 0.1
PDLIM5-203ENST00000359265 VWA5AO00534 786 aa15.69■□□□□ 0.1
PDLIM5-203ENST00000359265 OPLAHO14841 1288 aa15.69■□□□□ 0.1
PDLIM5-203ENST00000359265 OR52Z1P0C646 297 aa15.69■□□□□ 0.1
PDLIM5-203ENST00000359265 POLR2MP0CAP2 368 aa15.69■□□□□ 0.1
PDLIM5-203ENST00000359265 HOXA7P31268 230 aaPredicted RBP15.69■□□□□ 0.1
PDLIM5-203ENST00000359265 GJA5P36382 358 aa15.69■□□□□ 0.1
PDLIM5-203ENST00000359265 OAZ1P54368 228 aa15.69■□□□□ 0.1
PDLIM5-203ENST00000359265 CAP1Q01518 475 aa15.69■□□□□ 0.1
PDLIM5-203ENST00000359265 GRIN1Q05586 938 aa15.69■□□□□ 0.1
PDLIM5-203ENST00000359265 SNW1Q13573 536 aaKnown RBP15.69■□□□□ 0.1
PDLIM5-203ENST00000359265 SPRYD7Q5W111 196 aa15.69■□□□□ 0.1
PDLIM5-203ENST00000359265 MOXD1Q6UVY6 613 aa15.69■□□□□ 0.1
PDLIM5-203ENST00000359265 LRSAM1Q6UWE0 723 aa15.69■□□□□ 0.1
PDLIM5-203ENST00000359265 MCF2L2Q86YR7 1114 aa15.69■□□□□ 0.1
PDLIM5-203ENST00000359265 CPXCR1Q8N123 301 aa15.69■□□□□ 0.1
PDLIM5-203ENST00000359265 SAMD3Q8N6K7 520 aa15.69■□□□□ 0.1
PDLIM5-203ENST00000359265 C4orf32Q8N8J7 132 aa15.69■□□□□ 0.1
PDLIM5-203ENST00000359265 AGBL1Q96MI9 1066 aa15.69■□□□□ 0.1
PDLIM5-203ENST00000359265 COL25A1Q9BXS0 654 aaPredicted RBP15.69■□□□□ 0.1
PDLIM5-203ENST00000359265 CSRNP2Q9H175 543 aa15.69■□□□□ 0.1
PDLIM5-203ENST00000359265 RAVER2Q9HCJ3 691 aaKnown RBP15.69■□□□□ 0.1
PDLIM5-203ENST00000359265 HPSEQ9Y251 543 aa15.69■□□□□ 0.1
PDLIM5-203ENST00000359265 PTPN22Q9Y2R2 807 aa15.69■□□□□ 0.1
PDLIM5-203ENST00000359265 ZNF202O95125 648 aa15.68■□□□□ 0.1
PDLIM5-203ENST00000359265 CFBP00751 764 aa15.68■□□□□ 0.1
PDLIM5-203ENST00000359265 ALAS1P13196 640 aa15.68■□□□□ 0.1
PDLIM5-203ENST00000359265 OSBPP22059 807 aa15.68■□□□□ 0.1
PDLIM5-203ENST00000359265 LONP1P36776 959 aaKnown RBP15.68■□□□□ 0.1
PDLIM5-203ENST00000359265 SREBF1P36956 1147 aa15.68■□□□□ 0.1
PDLIM5-203ENST00000359265 USP11P51784 963 aa15.68■□□□□ 0.1
PDLIM5-203ENST00000359265 IRX3P78415 501 aaPredicted RBP15.68■□□□□ 0.1
PDLIM5-203ENST00000359265 PPP4R3AQ6IN85 833 aa15.68■□□□□ 0.1
PDLIM5-203ENST00000359265 DTHD1Q6ZMT9 781 aa15.68■□□□□ 0.1
PDLIM5-203ENST00000359265 TIGD1Q96MW7 591 aa15.68■□□□□ 0.1
PDLIM5-203ENST00000359265 TMEM60Q9H2L4 133 aa15.68■□□□□ 0.1
PDLIM5-203ENST00000359265 PRO3102Q9H379 93 aa15.68■□□□□ 0.1
PDLIM5-203ENST00000359265 PNMA3Q9UL41 463 aa15.68■□□□□ 0.1
PDLIM5-203ENST00000359265 KCNH3Q9ULD8 1083 aa15.68■□□□□ 0.1
PDLIM5-203ENST00000359265 ADAMTS5Q9UNA0 930 aa15.68■□□□□ 0.1
PDLIM5-203ENST00000359265 GOLGA6L3A6NEY3 463 aa15.67■□□□□ 0.1
PDLIM5-203ENST00000359265 SOX1O00570 391 aaPredicted RBP15.67■□□□□ 0.1
PDLIM5-203ENST00000359265 TDP2O95551 362 aa15.67■□□□□ 0.1
PDLIM5-203ENST00000359265 HOXA13P31271 388 aaPredicted RBP15.67■□□□□ 0.1
PDLIM5-203ENST00000359265 TXLNAP40222 546 aa15.67■□□□□ 0.1
PDLIM5-203ENST00000359265 ARHGAP4P98171 946 aa15.67■□□□□ 0.1
PDLIM5-203ENST00000359265 CAMK4Q16566 473 aa15.67■□□□□ 0.1
PDLIM5-203ENST00000359265 CALCRLQ16602 461 aa15.67■□□□□ 0.1
PDLIM5-203ENST00000359265 TREML2Q5T2D2 321 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms