RNA–Protein interactions for RNA: ENST00000358161.9

SPTAN1-201, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTAN1, Length 7,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-201ENST00000358161 AXIN2Q9Y2T1 843 aa11.33□□□□□ -0.6
SPTAN1-201ENST00000358161 BZW2Q9Y6E2 419 aaKnown RBP11.33□□□□□ -0.6
SPTAN1-201ENST00000358161 MTMR3Q13615 1198 aa11.33□□□□□ -0.6
SPTAN1-201ENST00000358161 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.33□□□□□ -0.6
SPTAN1-201ENST00000358161 ZSWIM5Q9P217 1185 aa11.33□□□□□ -0.6
SPTAN1-201ENST00000358161 OATP04181 439 aa11.33□□□□□ -0.6
SPTAN1-201ENST00000358161 MCAMP43121 646 aa11.33□□□□□ -0.6
SPTAN1-201ENST00000358161 PPM1KQ8N3J5 372 aa11.33□□□□□ -0.6
SPTAN1-201ENST00000358161 NSUN7Q8NE18 718 aaKnown RBP11.33□□□□□ -0.6
SPTAN1-201ENST00000358161 DHTKD1Q96HY7 919 aaPredicted RBP11.33□□□□□ -0.6
SPTAN1-201ENST00000358161 LRFN2Q9ULH4 789 aa11.33□□□□□ -0.6
SPTAN1-201ENST00000358161 CAPN2P17655 700 aa11.33□□□□□ -0.6
SPTAN1-201ENST00000358161 MFAP3P55082 362 aa11.33□□□□□ -0.6
SPTAN1-201ENST00000358161 USP17L2Q6R6M4 530 aa11.33□□□□□ -0.6
SPTAN1-201ENST00000358161 ARHGEF1Q92888 912 aaKnown RBP11.33□□□□□ -0.6
SPTAN1-201ENST00000358161 TIGD1Q96MW7 591 aa11.33□□□□□ -0.6
SPTAN1-201ENST00000358161 RIPOR2Q9Y4F9 1068 aa11.33□□□□□ -0.6
SPTAN1-201ENST00000358161 TTLL3Q9Y4R7 772 aa11.33□□□□□ -0.6
SPTAN1-201ENST00000358161 A6NNZ2 444 aa11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 ZSCAN20P17040 1043 aaPredicted RBP11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 PSMC2P35998 433 aaKnown RBP11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 TUBB8Q3ZCM7 444 aa11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 PI16Q6UXB8 463 aa11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 RUFY4Q6ZNE9 571 aa11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 CCDC127Q96BQ5 260 aa11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 DYNLL2Q96FJ2 89 aa11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 PRDM10Q9NQV6 1147 aa11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 SASH1O94885 1247 aa11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 PTPREP23469 700 aa11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 EXOC3L4Q17RC7 722 aa11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 METTL23Q86XA0 190 aa11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 DGKHQ86XP1 1220 aa11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 BIRC2Q13490 618 aa11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 STAG1Q8WVM7 1258 aa11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 CEP170P1Q96L14 293 aa11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 WDR70Q9NW82 654 aa11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 PSDA5PKW4 1024 aaPredicted RBP11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 UBXN2AP68543 259 aa11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 PTK2Q05397 1052 aa11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 PPP1R2P3Q6NXS1 205 aa11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 SPATA24Q86W54 205 aa11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 CCDC110Q8TBZ0 833 aa11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 DDX23Q9BUQ8 820 aaKnown RBP11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 PODXL2Q9NZ53 605 aa11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 NUB1Q9Y5A7 615 aa11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 EBAG9O00559 213 aa11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 LONRF2Q1L5Z9 754 aa11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 GIMAP8Q8ND71 665 aaPredicted RBP11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 RIC8AQ9NPQ8 531 aa11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 PPRC1Q5VV67 1664 aaKnown RBP11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 INO80B-WBP1J3KQ70 363 aa11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 ABL1P00519 1130 aa11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 RASEFQ8IZ41 740 aa11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 SH3RF3Q8TEJ3 882 aaPredicted RBP11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 ZNF526Q8TF50 670 aaPredicted RBP11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 INO80BQ9C086 356 aaPredicted RBP11.32□□□□□ -0.6
SPTAN1-201ENST00000358161 DTNBO60941 627 aa11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 ALCAMQ13740 583 aa11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 GJA10Q969M2 543 aa11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 NT5C1BQ96P26 610 aa11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 SERPINA10Q9UK55 444 aa11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 ABCB4P21439 1286 aa11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 VPS52Q8N1B4 723 aa11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 HOXC10Q9NYD6 342 aa11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 SYNE4Q8N205 404 aa11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 ATP2A3Q93084 1043 aa11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 TRIM31Q9BZY9 425 aa11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 CD209Q9NNX6 404 aa11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 FBXO40Q9UH90 709 aa11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 DIP2CQ9Y2E4 1556 aa11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 CPDO75976 1380 aa11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 ADKP55263 362 aaKnown RBP11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 POLR2FP61218 127 aaKnown RBP11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 RC3H1Q5TC82 1133 aaKnown RBP11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 SCYL2Q6P3W7 929 aa11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 KLHL7Q8IXQ5 586 aa11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 COA7Q96BR5 231 aa11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 FEM1BQ9UK73 627 aa11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 RIMBP3CA6NJZ7 1639 aa11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 RIMBP3BA6NNM3 1639 aa11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 RIMBP3Q9UFD9 1639 aa11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 DLC1Q96QB1 1528 aa11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 SLC12A2P55011 1212 aa11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 AP3B2Q13367 1082 aa11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 LONRF3Q496Y0 759 aa11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 NLRP7Q8WX94 980 aa11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 TRIM11Q96F44 468 aa11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 RSPH14Q9UHP6 348 aa11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 ZHX1Q9UKY1 873 aaPredicted RBP11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 C1orf167Q5SNV9 1468 aa11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 LMNB1P20700 586 aa11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 INTS8Q75QN2 995 aaKnown RBP11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 STRBPQ96SI9 672 aaKnown RBP11.31□□□□□ -0.6
SPTAN1-201ENST00000358161 NSFP46459 744 aaKnown RBP11.3□□□□□ -0.6
SPTAN1-201ENST00000358161 PPP2R5DQ14738 602 aa11.3□□□□□ -0.6
SPTAN1-201ENST00000358161 VPS72Q15906 364 aa11.3□□□□□ -0.6
SPTAN1-201ENST00000358161 DNAJC21Q5F1R6 531 aaKnown RBP11.3□□□□□ -0.6
SPTAN1-201ENST00000358161 RASGRP4Q8TDF6 673 aa11.3□□□□□ -0.6
SPTAN1-201ENST00000358161 P3H4Q92791 437 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms