RNA–Protein interactions for RNA: ENST00000357714.5

CD46-204, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-204ENST00000357714 KLC4Q9NSK0 619 aa8.5□□□□□ -1.05
CD46-204ENST00000357714 KBTBD4Q9NVX7 518 aa8.5□□□□□ -1.05
CD46-204ENST00000357714 ASAP1Q9ULH1 1129 aa8.5□□□□□ -1.05
CD46-204ENST00000357714 FAM205AQ6ZU69 1335 aa8.5□□□□□ -1.05
CD46-204ENST00000357714 USP17L12C9JPN9 530 aa8.5□□□□□ -1.05
CD46-204ENST00000357714 USP17L21D6R901 530 aa8.5□□□□□ -1.05
CD46-204ENST00000357714 SSBP05455 408 aaKnown RBP eCLIP8.5□□□□□ -1.05
CD46-204ENST00000357714 PLCG1P19174 1290 aa8.5□□□□□ -1.05
CD46-204ENST00000357714 TMC4Q7Z404 712 aa8.5□□□□□ -1.05
CD46-204ENST00000357714 C4orf32Q8N8J7 132 aa8.5□□□□□ -1.05
CD46-204ENST00000357714 HPS3Q969F9 1004 aa8.5□□□□□ -1.05
CD46-204ENST00000357714 ZNF622Q969S3 477 aaKnown RBP eCLIP8.5□□□□□ -1.052e-9■□□□□ 9.2
CD46-204ENST00000357714 MTMR8Q96EF0 704 aa8.5□□□□□ -1.05
CD46-204ENST00000357714 NDST4Q9H3R1 872 aa8.5□□□□□ -1.05
CD46-204ENST00000357714 SLC39A2Q9NP94 309 aa8.5□□□□□ -1.05
CD46-204ENST00000357714 PRDM11Q9NQV5 511 aa8.5□□□□□ -1.05
CD46-204ENST00000357714 BCCIPQ9P287 314 aaKnown RBP eCLIP8.5□□□□□ -1.05
CD46-204ENST00000357714 SALL4Q9UJQ4 1053 aa8.5□□□□□ -1.05
CD46-204ENST00000357714 ANAPC4Q9UJX5 808 aa8.5□□□□□ -1.05
CD46-204ENST00000357714 DISP2A7MBM2 1401 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 ATXN2Q99700 1313 aaKnown RBP8.49□□□□□ -1.05
CD46-204ENST00000357714 ATP2C2O75185 946 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 FTCDO95954 541 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 ATF3P18847 181 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 SCP2P22307 547 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 KIF5BP33176 963 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 NF2P35240 595 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 SLC1A4P43007 532 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 VWA3BQ502W6 1294 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 ODF2Q5BJF6 829 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 CCDC84Q86UT8 332 aaPredicted RBP8.49□□□□□ -1.05
CD46-204ENST00000357714 CABP7Q86V35 215 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 KLHL7Q8IXQ5 586 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 CCDC13Q8IYE1 715 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 ARFGAP2Q8N6H7 521 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 IQCDQ96DY2 449 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 TRIM9Q9C026 710 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 TSKSQ9UJT2 592 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 TSPY2A6NKD2 308 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 HMGB1P1B2RPK0 211 aaPredicted RBP8.49□□□□□ -1.05
CD46-204ENST00000357714 ECM2O94769 699 aaPredicted RBP8.49□□□□□ -1.05
CD46-204ENST00000357714 FAM107AO95990 144 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 TNFRSF8P28908 595 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 IGHMBP2P38935 993 aaKnown RBP8.49□□□□□ -1.05
CD46-204ENST00000357714 ACTN3Q08043 901 aaPredicted RBP8.49□□□□□ -1.05
CD46-204ENST00000357714 DDR1Q08345 913 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 NEDD9Q14511 834 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 ENOX2Q16206 610 aaKnown RBP8.49□□□□□ -1.05
CD46-204ENST00000357714 KLHDC7AQ5VTJ3 777 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 YTHDF3Q7Z739 585 aaKnown RBP8.49□□□□□ -1.05
CD46-204ENST00000357714 CCDC155Q8N6L0 562 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 ZKSCAN4Q969J2 545 aaPredicted RBP8.49□□□□□ -1.05
CD46-204ENST00000357714 VCPKMTQ9H867 229 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 NLRC4Q9NPP4 1024 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 PCDHA4Q9UN74 947 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 PLAAQ9Y263 795 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 LAMB4A4D0S4 1761 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 PKD1L3Q7Z443 1732 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 IL2RBP14784 551 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 HNRNPH3P31942 346 aaKnown RBP8.49□□□□□ -1.05
CD46-204ENST00000357714 SMTNP53814 917 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 SLC4A8Q2Y0W8 1093 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 CNNM4Q6P4Q7 775 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 ZSCAN29Q8IWY8 852 aaPredicted RBP8.49□□□□□ -1.05
CD46-204ENST00000357714 CCSER1Q9C0I3 900 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 LUC7LQ9NQ29 371 aaKnown RBP8.49□□□□□ -1.05
CD46-204ENST00000357714 GDF3Q9NR23 364 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 RNF14Q9UBS8 474 aa8.49□□□□□ -1.05
CD46-204ENST00000357714 C1orf167Q5SNV9 1468 aa8.48□□□□□ -1.05
CD46-204ENST00000357714 GCOM1H8Y6P7 765 aaPredicted RBP8.48□□□□□ -1.05
CD46-204ENST00000357714 PALMO75781 387 aa8.48□□□□□ -1.05
CD46-204ENST00000357714 MYZAPP0CAP1 466 aa8.48□□□□□ -1.05
CD46-204ENST00000357714 AMPD3Q01432 767 aa8.48□□□□□ -1.05
CD46-204ENST00000357714 EHHADHQ08426 723 aa8.48□□□□□ -1.05
CD46-204ENST00000357714 TRADDQ15628 312 aa8.48□□□□□ -1.05
CD46-204ENST00000357714 WHAMMQ8TF30 809 aa8.48□□□□□ -1.05
CD46-204ENST00000357714 CASKIN2Q8WXE0 1202 aa8.48□□□□□ -1.05
CD46-204ENST00000357714 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.48□□□□□ -1.05
CD46-204ENST00000357714 SLC40A1Q9NP59 571 aa8.48□□□□□ -1.05
CD46-204ENST00000357714 PACSIN2Q9UNF0 486 aaPredicted RBP8.48□□□□□ -1.05
CD46-204ENST00000357714 PPP1R2P41236 205 aa8.48□□□□□ -1.05
CD46-204ENST00000357714 TNNC1P63316 161 aa8.48□□□□□ -1.05
CD46-204ENST00000357714 MAN2A1Q16706 1144 aa8.48□□□□□ -1.05
CD46-204ENST00000357714 TXNRD1Q16881 649 aa8.48□□□□□ -1.05
CD46-204ENST00000357714 HEATR3Q7Z4Q2 680 aa8.48□□□□□ -1.05
CD46-204ENST00000357714 RNF10Q8N5U6 811 aaKnown RBP8.48□□□□□ -1.05
CD46-204ENST00000357714 TAF4BQ92750 862 aa8.48□□□□□ -1.05
CD46-204ENST00000357714 CYFIP2Q96F07 1278 aa8.48□□□□□ -1.05
CD46-204ENST00000357714 SCLT1Q96NL6 688 aa8.48□□□□□ -1.05
CD46-204ENST00000357714 A1CFQ9NQ94 594 aaKnown RBP8.48□□□□□ -1.05
CD46-204ENST00000357714 ODF2LQ9ULJ1 636 aa8.48□□□□□ -1.05
CD46-204ENST00000357714 ARID5AQ03989 594 aa8.47□□□□□ -1.05
CD46-204ENST00000357714 PPP2R5AQ15172 486 aa8.47□□□□□ -1.05
CD46-204ENST00000357714 LETM2Q2VYF4 491 aa8.47□□□□□ -1.05
CD46-204ENST00000357714 SLC9C1Q4G0N8 1177 aa8.47□□□□□ -1.05
CD46-204ENST00000357714 RPAINQ86UA6 219 aa8.47□□□□□ -1.05
CD46-204ENST00000357714 DZIP3Q86Y13 1208 aaKnown RBP8.47□□□□□ -1.05
CD46-204ENST00000357714 OR2W6PQ8NHA6 318 aa8.47□□□□□ -1.05
CD46-204ENST00000357714 LRRC15Q8TF66 581 aa8.47□□□□□ -1.05
CD46-204ENST00000357714 N4BP2L2Q92802 583 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms