RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 ITIH6Q6UXX5 1313 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 SPDYE3A6NKU9 549 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 SSR1P43307 286 aaKnown RBP7.55□□□□□ -1.2
RTN4-203ENST00000357376 PMS1P54277 932 aaKnown RBP7.55□□□□□ -1.2
RTN4-203ENST00000357376 GTF2IP78347 998 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 GFPT1Q06210 699 aaPredicted RBP7.55□□□□□ -1.2
RTN4-203ENST00000357376 TCP10Q12799 353 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 VWA3BQ502W6 1294 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 GALNT17Q6IS24 598 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 ELOA2Q8IYF1 753 aaPredicted RBP7.55□□□□□ -1.2
RTN4-203ENST00000357376 FAM133AQ8N9E0 248 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 TBC1D5Q92609 795 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 AK8Q96MA6 479 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.55□□□□□ -1.21e-7■■■■■ 67.1
RTN4-203ENST00000357376 CAPN11Q9UMQ6 739 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 KIAA1024Q9UPX6 916 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 PCDHB13Q9Y5F0 798 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 FAM237AA0A1B0GTK4 181 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 LRRIQ3A6PVS8 624 aaPredicted RBP7.54□□□□□ -1.2
RTN4-203ENST00000357376 LAD1O00515 517 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 PLEKP08567 350 aaPredicted RBP7.54□□□□□ -1.2
RTN4-203ENST00000357376 NAA35Q5VZE5 725 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 CERS3Q8IU89 383 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 SELENOSQ9BQE4 189 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 RIOK1Q9BRS2 568 aaKnown RBP7.54□□□□□ -1.2
RTN4-203ENST00000357376 CUEDC2Q9H467 287 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 ADAMTS1Q9UHI8 967 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 DDX25Q9UHL0 483 aaKnown RBP7.54□□□□□ -1.2
RTN4-203ENST00000357376 GGA1Q9UJY5 639 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 FAM184BQ9ULE4 1060 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 PCDHA6Q9UN73 950 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 PACSIN2Q9UNF0 486 aaPredicted RBP7.54□□□□□ -1.2
RTN4-203ENST00000357376 PCDHA8Q9Y5H6 950 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 FAM205AQ6ZU69 1335 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 E7EVH7 732 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 CAMTA2O94983 1202 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 ABCB4P21439 1286 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 CYP4A11Q02928 519 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 TBC1D9BQ66K14 1250 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 FNBP4Q8N3X1 1017 aaPredicted RBP7.54□□□□□ -1.2
RTN4-203ENST00000357376 SLC4A9Q96Q91 983 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 TRIM9Q9C026 710 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 LACRTQ9GZZ8 138 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 EHD2Q9NZN4 543 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 NFU1Q9UMS0 254 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 L1RE1Q9UN81 338 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 LRRC37A3O60309 1634 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 NTSR2O95665 410 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 PDCLQ13371 301 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 ADAM9Q13443 819 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 COG1Q8WTW3 980 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 DDX12PQ92771 950 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 LRRC1Q9BTT6 524 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 ZC3H12CQ9C0D7 883 aaKnown RBP7.54□□□□□ -1.2
RTN4-203ENST00000357376 PKD2L1Q9P0L9 805 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 TACC3Q9Y6A5 838 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 EIF3CLB5ME19 914 aaKnown RBP7.54□□□□□ -1.2
RTN4-203ENST00000357376 ORC4O43929 436 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 FAM13AO94988 1023 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 GCNT3O95395 438 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 TDP2O95551 362 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 MYL1P05976 194 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 SLC1A4P43007 532 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 CDK8P49336 464 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 SCNN1DP51172 638 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 EPHB4P54760 987 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 TRAPPC3LQ5T215 181 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 PDXDC2PQ6P474 469 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 KCTD1Q719H9 257 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 PEX26Q7Z412 305 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 CPLX4Q7Z7G2 160 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 RDH13Q8NBN7 331 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 CTNNBL1Q8WYA6 563 aaPredicted RBP7.54□□□□□ -1.2
RTN4-203ENST00000357376 EIF3CQ99613 913 aaKnown RBP7.54□□□□□ -1.2
RTN4-203ENST00000357376 CDCA7Q9BWT1 371 aaPredicted RBP7.54□□□□□ -1.2
RTN4-203ENST00000357376 PSTPIP2Q9H939 334 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 BARHL2Q9NY43 387 aa7.54□□□□□ -1.2
RTN4-203ENST00000357376 GOLGA6L10A0A0M3HER8 536 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 A0A1W2PQC6 194 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 USP17L5A8MUK1 530 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 GOLGA8KD6RF30 607 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 MEIS1O00470 390 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 FKBP3Q00688 224 aaKnown RBP7.53□□□□□ -1.2
RTN4-203ENST00000357376 ITPK1Q13572 414 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 PRR16Q569H4 304 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 AEBP2Q6ZN18 517 aaPredicted RBP7.53□□□□□ -1.2
RTN4-203ENST00000357376 CCDC121Q6ZUS5 278 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 MAEAQ7L5Y9 396 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 DAAM2Q86T65 1068 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 SRLQ86TD4 932 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 CCDC25Q86WR0 208 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 GJA10Q969M2 543 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 DPH5Q9H2P9 285 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 MAGEF1Q9HAY2 307 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 MST1RQ04912 1400 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 RNF225M0QZC1 329 aaPredicted RBP7.53□□□□□ -1.2
RTN4-203ENST00000357376 PPFIA4O75335 1185 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 SRGNP10124 158 aa7.53□□□□□ -1.2
RTN4-203ENST00000357376 EPB41P11171 864 aaKnown RBP7.53□□□□□ -1.2
RTN4-203ENST00000357376 PABPC4Q13310 644 aaKnown RBP eCLIP7.53□□□□□ -1.22e-7■■■□□ 16.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms