RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 O00370 1275 aa8.47□□□□□ -1.05
CCR9-201ENST00000355983 CSB-PGBD3P0DP91 1061 aa8.47□□□□□ -1.05
CCR9-201ENST00000355983 CDC25AP30304 524 aa8.47□□□□□ -1.05
CCR9-201ENST00000355983 GBP1P32455 592 aa8.47□□□□□ -1.05
CCR9-201ENST00000355983 HSD17B3P37058 310 aa8.47□□□□□ -1.05
CCR9-201ENST00000355983 CCT6AP40227 531 aaKnown RBP8.47□□□□□ -1.05
CCR9-201ENST00000355983 GNPTABQ3T906 1256 aa8.47□□□□□ -1.05
CCR9-201ENST00000355983 RRP12Q5JTH9 1297 aaKnown RBP8.47□□□□□ -1.05
CCR9-201ENST00000355983 ASRGL1Q7L266 308 aa8.47□□□□□ -1.05
CCR9-201ENST00000355983 PNMA8AQ86V59 439 aaPredicted RBP8.47□□□□□ -1.05
CCR9-201ENST00000355983 LCA5Q86VQ0 697 aa8.47□□□□□ -1.05
CCR9-201ENST00000355983 CASKIN2Q8WXE0 1202 aa8.47□□□□□ -1.05
CCR9-201ENST00000355983 NCSTNQ92542 709 aa8.47□□□□□ -1.05
CCR9-201ENST00000355983 SLX1AQ9BQ83 275 aa8.47□□□□□ -1.05
CCR9-201ENST00000355983 SEC31BQ9NQW1 1179 aa8.47□□□□□ -1.05
CCR9-201ENST00000355983 CHPF2Q9P2E5 772 aa8.47□□□□□ -1.05
CCR9-201ENST00000355983 CIDEBQ9UHD4 219 aa8.47□□□□□ -1.05
CCR9-201ENST00000355983 TMEM59LQ9UK28 342 aa8.47□□□□□ -1.05
CCR9-201ENST00000355983 C2CD2Q9Y426 696 aa8.47□□□□□ -1.05
CCR9-201ENST00000355983 USP6P35125 1406 aa8.47□□□□□ -1.05
CCR9-201ENST00000355983 OAS1P00973 400 aaKnown RBP8.47□□□□□ -1.05
CCR9-201ENST00000355983 RARAP10276 462 aa8.47□□□□□ -1.05
CCR9-201ENST00000355983 ALDH1B1P30837 517 aa8.47□□□□□ -1.05
CCR9-201ENST00000355983 HPDP32754 393 aaPredicted RBP8.47□□□□□ -1.05
CCR9-201ENST00000355983 RANBP1P43487 201 aa8.47□□□□□ -1.05
CCR9-201ENST00000355983 ALDH5A1P51649 535 aaPredicted RBP8.47□□□□□ -1.05
CCR9-201ENST00000355983 TNNC1P63316 161 aa8.47□□□□□ -1.05
CCR9-201ENST00000355983 BNIP1Q12981 228 aa8.47□□□□□ -1.05
CCR9-201ENST00000355983 IRGCQ6NXR0 463 aa8.47□□□□□ -1.05
CCR9-201ENST00000355983 PBKQ96KB5 322 aa8.47□□□□□ -1.05
CCR9-201ENST00000355983 NEUROD6Q96NK8 337 aa8.47□□□□□ -1.05
CCR9-201ENST00000355983 VPS16Q9H269 839 aa8.47□□□□□ -1.05
CCR9-201ENST00000355983 SAMD15Q9P1V8 674 aa8.47□□□□□ -1.05
CCR9-201ENST00000355983 ATXN10Q9UBB4 475 aa8.47□□□□□ -1.05
CCR9-201ENST00000355983 CTNND2Q9UQB3 1225 aa8.47□□□□□ -1.05
CCR9-201ENST00000355983 EID1Q9Y6B2 187 aa8.47□□□□□ -1.05
CCR9-201ENST00000355983 MYH10P35580 1976 aa8.46□□□□□ -1.05
CCR9-201ENST00000355983 PLEKHG3A1L390 1219 aa8.46□□□□□ -1.06
CCR9-201ENST00000355983 TOB1P50616 345 aaPredicted RBP8.46□□□□□ -1.06
CCR9-201ENST00000355983 ANTXR2P58335 489 aa8.46□□□□□ -1.06
CCR9-201ENST00000355983 NLRP5P59047 1200 aa8.46□□□□□ -1.06
CCR9-201ENST00000355983 GUCY2DQ02846 1103 aa8.46□□□□□ -1.06
CCR9-201ENST00000355983 CTDSPL2Q05D32 466 aa8.46□□□□□ -1.06
CCR9-201ENST00000355983 ADAM9Q13443 819 aa8.46□□□□□ -1.06
CCR9-201ENST00000355983 SAFBQ15424 915 aaKnown RBP eCLIP8.46□□□□□ -1.06
CCR9-201ENST00000355983 ACBD5Q5T8D3 534 aaPredicted RBP8.46□□□□□ -1.06
CCR9-201ENST00000355983 CC2D2BQ6DHV5 1058 aa8.46□□□□□ -1.06
CCR9-201ENST00000355983 TBC1D1Q86TI0 1168 aaPredicted RBP8.46□□□□□ -1.06
CCR9-201ENST00000355983 CNBD1Q8NA66 436 aa8.46□□□□□ -1.06
CCR9-201ENST00000355983 MAIP1Q8WWC4 291 aa8.46□□□□□ -1.06
CCR9-201ENST00000355983 FERMT2Q96AC1 680 aa8.46□□□□□ -1.06
CCR9-201ENST00000355983 EDC3Q96F86 508 aaKnown RBP8.46□□□□□ -1.06
CCR9-201ENST00000355983 LTV1Q96GA3 475 aaPredicted RBP8.46□□□□□ -1.06
CCR9-201ENST00000355983 RAB3IPQ96QF0 476 aaPredicted RBP8.46□□□□□ -1.06
CCR9-201ENST00000355983 TLR10Q9BXR5 811 aa8.46□□□□□ -1.06
CCR9-201ENST00000355983 ESF1Q9H501 851 aaKnown RBP8.46□□□□□ -1.06
CCR9-201ENST00000355983 TAB2Q9NYJ8 693 aa8.46□□□□□ -1.06
CCR9-201ENST00000355983 ADAM22Q9P0K1 906 aa8.46□□□□□ -1.06
CCR9-201ENST00000355983 CNOT8Q9UFF9 292 aaKnown RBP8.46□□□□□ -1.06
CCR9-201ENST00000355983 HEG1Q9ULI3 1381 aa8.46□□□□□ -1.06
CCR9-201ENST00000355983 RNF113AO15541 343 aaKnown RBP8.46□□□□□ -1.06
CCR9-201ENST00000355983 EVI5O60447 810 aa8.46□□□□□ -1.06
CCR9-201ENST00000355983 HIP1RO75146 1068 aa8.46□□□□□ -1.06
CCR9-201ENST00000355983 MMP1P03956 469 aa8.46□□□□□ -1.06
CCR9-201ENST00000355983 MSH2P43246 934 aa8.46□□□□□ -1.06
CCR9-201ENST00000355983 STX17P56962 302 aa8.46□□□□□ -1.06
CCR9-201ENST00000355983 DEUP1Q05D60 604 aa8.46□□□□□ -1.06
CCR9-201ENST00000355983 KLC1Q07866 573 aa8.46□□□□□ -1.06
CCR9-201ENST00000355983 TMED1Q13445 227 aa8.46□□□□□ -1.06
CCR9-201ENST00000355983 UAP1Q16222 522 aaPredicted RBP8.46□□□□□ -1.06
CCR9-201ENST00000355983 NTRK3Q16288 839 aa8.46□□□□□ -1.06
CCR9-201ENST00000355983 CCDC96Q2M329 555 aa8.46□□□□□ -1.06
CCR9-201ENST00000355983 PARP6Q2NL67 630 aa8.46□□□□□ -1.06
CCR9-201ENST00000355983 ZNF658Q5TYW1 1059 aaPredicted RBP8.46□□□□□ -1.06
CCR9-201ENST00000355983 ERICH1Q86X53 443 aa8.46□□□□□ -1.06
CCR9-201ENST00000355983 ENDOVQ8N8Q3 282 aaKnown RBP8.46□□□□□ -1.06
CCR9-201ENST00000355983 KIFAP3Q92845 792 aa8.46□□□□□ -1.06
CCR9-201ENST00000355983 RBM17Q96I25 401 aaKnown RBP8.46□□□□□ -1.06
CCR9-201ENST00000355983 EYA1Q99502 592 aa8.46□□□□□ -1.06
CCR9-201ENST00000355983 INCENPQ9NQS7 918 aa8.46□□□□□ -1.06
CCR9-201ENST00000355983 MAP3K2Q9Y2U5 619 aa8.46□□□□□ -1.06
CCR9-201ENST00000355983 MAST3O60307 1309 aa8.45□□□□□ -1.06
CCR9-201ENST00000355983 NRXN3Q9Y4C0 1643 aa8.45□□□□□ -1.06
CCR9-201ENST00000355983 PHF20L1A8MW92 1017 aa8.45□□□□□ -1.06
CCR9-201ENST00000355983 PARP1P09874 1014 aaKnown RBP8.45□□□□□ -1.06
CCR9-201ENST00000355983 CCNB1P14635 433 aa8.45□□□□□ -1.06
CCR9-201ENST00000355983 SP100P23497 879 aaPredicted RBP8.45□□□□□ -1.06
CCR9-201ENST00000355983 TPP2P29144 1249 aaPredicted RBP8.45□□□□□ -1.06
CCR9-201ENST00000355983 METAP2P50579 478 aaKnown RBP eCLIP8.45□□□□□ -1.06
CCR9-201ENST00000355983 COPS2P61201 443 aa8.45□□□□□ -1.06
CCR9-201ENST00000355983 CCDC15Q0P6D6 951 aa8.45□□□□□ -1.06
CCR9-201ENST00000355983 CCDC152Q4G0S7 254 aa8.45□□□□□ -1.06
CCR9-201ENST00000355983 KLHL10Q6JEL2 608 aa8.45□□□□□ -1.06
CCR9-201ENST00000355983 GRAMD1CQ8IYS0 662 aa8.45□□□□□ -1.06
CCR9-201ENST00000355983 AZIN2Q96A70 460 aa8.45□□□□□ -1.06
CCR9-201ENST00000355983 ERGIC2Q96RQ1 377 aa8.45□□□□□ -1.06
CCR9-201ENST00000355983 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.45□□□□□ -1.06
CCR9-201ENST00000355983 ATP8A2Q9NTI2 1148 aa8.45□□□□□ -1.06
CCR9-201ENST00000355983 GJB4Q9NTQ9 266 aa8.45□□□□□ -1.06
CCR9-201ENST00000355983 CTTNBP2NLQ9P2B4 639 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms