RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 PRPSAP1Q14558 356 aa19.67■□□□□ 0.74
COL18A1-202ENST00000355480 METTL23Q86XA0 190 aa19.67■□□□□ 0.74
COL18A1-202ENST00000355480 WDR11Q9BZH6 1224 aa19.67■□□□□ 0.74
COL18A1-202ENST00000355480 FOXP1Q9H334 677 aaPredicted RBP19.67■□□□□ 0.74
COL18A1-202ENST00000355480 CUEDC2Q9H467 287 aa19.67■□□□□ 0.74
COL18A1-202ENST00000355480 BCAP29Q9UHQ4 241 aa19.67■□□□□ 0.74
COL18A1-202ENST00000355480 WDR17Q8IZU2 1322 aa19.67■□□□□ 0.74
COL18A1-202ENST00000355480 COBLO75128 1261 aa19.66■□□□□ 0.74
COL18A1-202ENST00000355480 CCND2P30279 289 aa19.66■□□□□ 0.74
COL18A1-202ENST00000355480 COPB1P53618 953 aaKnown RBP19.66■□□□□ 0.74
COL18A1-202ENST00000355480 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.66■□□□□ 0.746e-9■□□□□ 9.6
COL18A1-202ENST00000355480 MAP4K1Q92918 833 aa19.66■□□□□ 0.74
COL18A1-202ENST00000355480 LSG1Q9H089 658 aaKnown RBP19.66■□□□□ 0.74
COL18A1-202ENST00000355480 YEATS2Q9ULM3 1422 aa19.66■□□□□ 0.74
COL18A1-202ENST00000355480 TRAPPC10P48553 1259 aa19.66■□□□□ 0.74
COL18A1-202ENST00000355480 PIGSQ96S52 555 aa19.66■□□□□ 0.74
COL18A1-202ENST00000355480 GAP43P17677 238 aa19.66■□□□□ 0.74
COL18A1-202ENST00000355480 RNASELQ05823 741 aaKnown RBP19.66■□□□□ 0.74
COL18A1-202ENST00000355480 PHLDB2Q86SQ0 1253 aa19.66■□□□□ 0.74
COL18A1-202ENST00000355480 RFX6Q8HWS3 928 aa19.66■□□□□ 0.74
COL18A1-202ENST00000355480 UHMK1Q8TAS1 419 aaKnown RBP19.66■□□□□ 0.74
COL18A1-202ENST00000355480 MIPOL1Q8TD10 442 aa19.66■□□□□ 0.74
COL18A1-202ENST00000355480 FAM149B1Q96BN6 582 aa19.66■□□□□ 0.74
COL18A1-202ENST00000355480 CEP170P1Q96L14 293 aa19.66■□□□□ 0.74
COL18A1-202ENST00000355480 NACC1Q96RE7 527 aa19.66■□□□□ 0.74
COL18A1-202ENST00000355480 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.66■□□□□ 0.74
COL18A1-202ENST00000355480 MYO1FO00160 1098 aa19.66■□□□□ 0.74
COL18A1-202ENST00000355480 PSMC2P35998 433 aaKnown RBP19.66■□□□□ 0.74
COL18A1-202ENST00000355480 STAT2P52630 851 aa19.66■□□□□ 0.74
COL18A1-202ENST00000355480 ZNF526Q8TF50 670 aaPredicted RBP19.66■□□□□ 0.74
COL18A1-202ENST00000355480 TSC1Q92574 1164 aa19.66■□□□□ 0.74
COL18A1-202ENST00000355480 ACCSQ96QU6 501 aa19.66■□□□□ 0.74
COL18A1-202ENST00000355480 SNX25Q9H3E2 840 aa19.66■□□□□ 0.74
COL18A1-202ENST00000355480 SOS2Q07890 1332 aaPredicted RBP19.66■□□□□ 0.74
COL18A1-202ENST00000355480 XPAP23025 273 aaPredicted RBP19.66■□□□□ 0.74
COL18A1-202ENST00000355480 MESDQ14696 234 aa19.66■□□□□ 0.74
COL18A1-202ENST00000355480 EXOC8Q8IYI6 725 aa19.66■□□□□ 0.74
COL18A1-202ENST00000355480 GOLGA8CPA6NN73 597 aa19.65■□□□□ 0.74
COL18A1-202ENST00000355480 RASSF2P50749 326 aa19.65■□□□□ 0.74
COL18A1-202ENST00000355480 NAA35Q5VZE5 725 aa19.65■□□□□ 0.74
COL18A1-202ENST00000355480 ARHGEF25Q86VW2 580 aa19.65■□□□□ 0.74
COL18A1-202ENST00000355480 TRIM56Q9BRZ2 755 aaKnown RBP19.65■□□□□ 0.74
COL18A1-202ENST00000355480 TUBGCP2Q9BSJ2 902 aa19.65■□□□□ 0.74
COL18A1-202ENST00000355480 CACNB1Q02641 598 aaPredicted RBP19.65■□□□□ 0.74
COL18A1-202ENST00000355480 ANKRD13CQ8N6S4 541 aa19.65■□□□□ 0.74
COL18A1-202ENST00000355480 CEP120Q8N960 986 aa19.65■□□□□ 0.74
COL18A1-202ENST00000355480 TBCKQ8TEA7 893 aa19.65■□□□□ 0.74
COL18A1-202ENST00000355480 ADGRL2O95490 1459 aa19.65■□□□□ 0.74
COL18A1-202ENST00000355480 ARHGAP42A6NI28 874 aa19.65■□□□□ 0.74
COL18A1-202ENST00000355480 CCDC93Q567U6 631 aa19.65■□□□□ 0.74
COL18A1-202ENST00000355480 BBS5Q8N3I7 341 aa19.65■□□□□ 0.74
COL18A1-202ENST00000355480 BBOF1Q8ND07 529 aa19.65■□□□□ 0.74
COL18A1-202ENST00000355480 FAM71BQ8TC56 605 aa19.65■□□□□ 0.74
COL18A1-202ENST00000355480 ANAPC5Q9UJX4 755 aa19.65■□□□□ 0.74
COL18A1-202ENST00000355480 LMNB1P20700 586 aa19.64■□□□□ 0.74
COL18A1-202ENST00000355480 ADD2P35612 726 aa19.64■□□□□ 0.74
COL18A1-202ENST00000355480 GARSP41250 739 aaKnown RBP19.64■□□□□ 0.74
COL18A1-202ENST00000355480 CDKL2Q92772 493 aa19.64■□□□□ 0.74
COL18A1-202ENST00000355480 KLHL14Q9P2G3 628 aa19.64■□□□□ 0.74
COL18A1-202ENST00000355480 RGS12O14924 1447 aa19.64■□□□□ 0.74
COL18A1-202ENST00000355480 RASSF7Q02833 373 aa19.64■□□□□ 0.73
COL18A1-202ENST00000355480 BRD3Q15059 726 aa19.64■□□□□ 0.73
COL18A1-202ENST00000355480 AK8Q96MA6 479 aa19.64■□□□□ 0.73
COL18A1-202ENST00000355480 DHX36Q9H2U1 1008 aaKnown RBP19.64■□□□□ 0.73
COL18A1-202ENST00000355480 EFCC1Q9HA90 598 aa19.64■□□□□ 0.73
COL18A1-202ENST00000355480 CSPG5O95196 566 aa19.64■□□□□ 0.73
COL18A1-202ENST00000355480 ZSCAN20P17040 1043 aaPredicted RBP19.64■□□□□ 0.73
COL18A1-202ENST00000355480 YWHAGP61981 247 aaKnown RBP eCLIP19.64■□□□□ 0.73
COL18A1-202ENST00000355480 ADCK5Q3MIX3 580 aa19.64■□□□□ 0.73
COL18A1-202ENST00000355480 EEPD1Q7L9B9 569 aa19.64■□□□□ 0.73
COL18A1-202ENST00000355480 NLRP7Q8WX94 980 aa19.64■□□□□ 0.73
COL18A1-202ENST00000355480 ANTXR1Q9H6X2 564 aa19.64■□□□□ 0.73
COL18A1-202ENST00000355480 EPN1Q9Y6I3 576 aaPredicted RBP19.64■□□□□ 0.73
COL18A1-202ENST00000355480 PASKQ96RG2 1323 aa19.64■□□□□ 0.73
COL18A1-202ENST00000355480 PRKAB2O43741 272 aa19.64■□□□□ 0.73
COL18A1-202ENST00000355480 GCFC2P16383 781 aaKnown RBP19.64■□□□□ 0.73
COL18A1-202ENST00000355480 ECE1P42892 770 aa19.64■□□□□ 0.73
COL18A1-202ENST00000355480 LCORLQ8N3X6 602 aa19.64■□□□□ 0.73
COL18A1-202ENST00000355480 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.64■□□□□ 0.73
COL18A1-202ENST00000355480 PI4K2BQ8TCG2 481 aa19.64■□□□□ 0.73
COL18A1-202ENST00000355480 CDHR1Q96JP9 859 aa19.64■□□□□ 0.73
COL18A1-202ENST00000355480 PRKAG2Q9UGJ0 569 aa19.64■□□□□ 0.73
COL18A1-202ENST00000355480 EHHADHQ08426 723 aa19.64■□□□□ 0.73
COL18A1-202ENST00000355480 LRRC41Q15345 812 aa19.64■□□□□ 0.73
COL18A1-202ENST00000355480 SYDE2Q5VT97 1194 aa19.64■□□□□ 0.73
COL18A1-202ENST00000355480 FAM186BQ8IYM0 893 aa19.64■□□□□ 0.73
COL18A1-202ENST00000355480 BZW2Q9Y6E2 419 aaKnown RBP19.64■□□□□ 0.73
COL18A1-202ENST00000355480 PRAMEF22A3QJZ6 481 aa19.63■□□□□ 0.73
COL18A1-202ENST00000355480 GSDMAQ96QA5 445 aa19.63■□□□□ 0.73
COL18A1-202ENST00000355480 MIGA2Q7L4E1 593 aa19.63■□□□□ 0.73
COL18A1-202ENST00000355480 COA7Q96BR5 231 aa19.63■□□□□ 0.73
COL18A1-202ENST00000355480 STK38LQ9Y2H1 464 aa19.63■□□□□ 0.73
COL18A1-202ENST00000355480 CYP21A2P08686 494 aa19.63■□□□□ 0.73
COL18A1-202ENST00000355480 ARHGAP4P98171 946 aa19.63■□□□□ 0.73
COL18A1-202ENST00000355480 KSR1Q8IVT5 923 aa19.63■□□□□ 0.73
COL18A1-202ENST00000355480 RYBPQ8N488 228 aaPredicted RBP19.63■□□□□ 0.73
COL18A1-202ENST00000355480 PCIF1Q9H4Z3 704 aa19.63■□□□□ 0.73
COL18A1-202ENST00000355480 A0A1B0GUA9 196 aa19.63■□□□□ 0.73
COL18A1-202ENST00000355480 MKRN3Q13064 507 aaKnown RBP19.63■□□□□ 0.73
COL18A1-202ENST00000355480 SLC39A14Q15043 492 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms