RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 IFNAR1P17181 557 aa12.01□□□□□ -0.49
SND1-201ENST00000354725 PTPREP23469 700 aa12.01□□□□□ -0.49
SND1-201ENST00000354725 LMOD1P29536 600 aaPredicted RBP12.01□□□□□ -0.49
SND1-201ENST00000354725 COPB2P35606 906 aa12.01□□□□□ -0.49
SND1-201ENST00000354725 TTF1Q15361 905 aaPredicted RBP12.01□□□□□ -0.49
SND1-201ENST00000354725 CCDC92Q53HC0 331 aaPredicted RBP12.01□□□□□ -0.49
SND1-201ENST00000354725 SYNE3Q6ZMZ3 975 aa12.01□□□□□ -0.49
SND1-201ENST00000354725 VMP1Q96GC9 406 aa12.01□□□□□ -0.49
SND1-201ENST00000354725 RGL1Q9NZL6 768 aa12.01□□□□□ -0.49
SND1-201ENST00000354725 GJA3Q9Y6H8 435 aa12.01□□□□□ -0.49
SND1-201ENST00000354725 BOLA2-SMG1P6H3BVE0 249 aa12.01□□□□□ -0.49
SND1-201ENST00000354725 STX10O60499 249 aa12.01□□□□□ -0.49
SND1-201ENST00000354725 TGFB3P10600 412 aa12.01□□□□□ -0.49
SND1-201ENST00000354725 UBASH3AP57075 661 aa12.01□□□□□ -0.49
SND1-201ENST00000354725 ALKBH2Q6NS38 261 aa12.01□□□□□ -0.49
SND1-201ENST00000354725 SHISA4Q96DD7 197 aa12.01□□□□□ -0.49
SND1-201ENST00000354725 CARD6Q9BX69 1037 aa12.01□□□□□ -0.49
SND1-201ENST00000354725 PARD6BQ9BYG5 372 aa12.01□□□□□ -0.49
SND1-201ENST00000354725 SLC7A5P2Q9GIP4 190 aa12.01□□□□□ -0.49
SND1-201ENST00000354725 POLLQ9UGP5 575 aa12.01□□□□□ -0.49
SND1-201ENST00000354725 BIN1O00499 593 aa12□□□□□ -0.49
SND1-201ENST00000354725 ACTN4O43707 911 aaKnown RBP12□□□□□ -0.49
SND1-201ENST00000354725 MMP1P03956 469 aa12□□□□□ -0.49
SND1-201ENST00000354725 FLCNQ8NFG4 579 aa12□□□□□ -0.49
SND1-201ENST00000354725 FAM81AQ8TBF8 368 aa12□□□□□ -0.49
SND1-201ENST00000354725 C17orf50Q8WW18 174 aa12□□□□□ -0.49
SND1-201ENST00000354725 RPS6KC1Q96S38 1066 aa12□□□□□ -0.49
SND1-201ENST00000354725 MPHOSPH8Q99549 860 aa12□□□□□ -0.49
SND1-201ENST00000354725 EPAS1Q99814 870 aa12□□□□□ -0.49
SND1-201ENST00000354725 FOXP1Q9H334 677 aaPredicted RBP12□□□□□ -0.49
SND1-201ENST00000354725 PCDHA5Q9Y5H7 936 aa12□□□□□ -0.49
SND1-201ENST00000354725 SPDYE3A6NKU9 549 aa12□□□□□ -0.49
SND1-201ENST00000354725 MARCKSP29966 332 aaPredicted RBP12□□□□□ -0.49
SND1-201ENST00000354725 ACTN3Q08043 901 aaPredicted RBP12□□□□□ -0.49
SND1-201ENST00000354725 PRPF4BQ13523 1007 aaKnown RBP12□□□□□ -0.49
SND1-201ENST00000354725 NR1I3Q14994 352 aa12□□□□□ -0.49
SND1-201ENST00000354725 SH3RF1Q7Z6J0 888 aa12□□□□□ -0.49
SND1-201ENST00000354725 NOSTRINQ8IVI9 506 aa12□□□□□ -0.49
SND1-201ENST00000354725 CHCHD4Q8N4Q1 142 aa12□□□□□ -0.49
SND1-201ENST00000354725 DDX24Q9GZR7 859 aaKnown RBP eCLIP12□□□□□ -0.491e-9■■■■□ 23.6
SND1-201ENST00000354725 FANCLQ9NW38 375 aa12□□□□□ -0.49
SND1-201ENST00000354725 MAN1B1Q9UKM7 699 aa12□□□□□ -0.49
SND1-201ENST00000354725 KCNH3Q9ULD8 1083 aa12□□□□□ -0.49
SND1-201ENST00000354725 CCT5P48643 541 aa11.99□□□□□ -0.49
SND1-201ENST00000354725 FMR1Q06787 632 aaKnown RBP eCLIP11.99□□□□□ -0.497e-7■■■□□ 15.3
SND1-201ENST00000354725 RALYLQ86SE5 291 aaKnown RBP11.99□□□□□ -0.49
SND1-201ENST00000354725 AGAP3Q96P47 875 aa11.99□□□□□ -0.49
SND1-201ENST00000354725 NACA2Q9H009 215 aa11.99□□□□□ -0.49
SND1-201ENST00000354725 VPS33BQ9H267 617 aa11.99□□□□□ -0.49
SND1-201ENST00000354725 BATF3Q9NR55 127 aa11.99□□□□□ -0.49
SND1-201ENST00000354725 PPP2R2CQ9Y2T4 447 aa11.99□□□□□ -0.49
SND1-201ENST00000354725 A0A1B0GTH6 734 aa11.99□□□□□ -0.49
SND1-201ENST00000354725 PDE6AP16499 860 aa11.99□□□□□ -0.49
SND1-201ENST00000354725 MAGEA10P43363 369 aaPredicted RBP11.99□□□□□ -0.49
SND1-201ENST00000354725 CEP112Q8N8E3 955 aa11.99□□□□□ -0.49
SND1-201ENST00000354725 VPS37AQ8NEZ2 397 aa11.99□□□□□ -0.49
SND1-201ENST00000354725 FAM71BQ8TC56 605 aa11.99□□□□□ -0.49
SND1-201ENST00000354725 MMADHCQ9H3L0 296 aaPredicted RBP11.99□□□□□ -0.49
SND1-201ENST00000354725 ATP6V0A4Q9HBG4 840 aa11.99□□□□□ -0.49
SND1-201ENST00000354725 CCDC151A5D8V7 595 aa11.99□□□□□ -0.49
SND1-201ENST00000354725 FSBPO95073 299 aa11.99□□□□□ -0.49
SND1-201ENST00000354725 IFIT5Q13325 482 aaKnown RBP11.99□□□□□ -0.49
SND1-201ENST00000354725 WASHC4Q2M389 1173 aa11.99□□□□□ -0.49
SND1-201ENST00000354725 RRP12Q5JTH9 1297 aaKnown RBP11.99□□□□□ -0.49
SND1-201ENST00000354725 CEP85LQ5SZL2 805 aa11.99□□□□□ -0.49
SND1-201ENST00000354725 KRI1Q8N9T8 703 aaKnown RBP11.99□□□□□ -0.49
SND1-201ENST00000354725 RBM46Q8TBY0 533 aaKnown RBP11.99□□□□□ -0.49
SND1-201ENST00000354725 KLC4Q9NSK0 619 aa11.99□□□□□ -0.49
SND1-201ENST00000354725 MRGBPQ9NV56 204 aa11.99□□□□□ -0.49
SND1-201ENST00000354725 UBE2Q2LH0YL09 131 aa11.98□□□□□ -0.49
SND1-201ENST00000354725 CPLX1O14810 134 aa11.98□□□□□ -0.49
SND1-201ENST00000354725 FOXN1O15353 648 aa11.98□□□□□ -0.49
SND1-201ENST00000354725 AHCYL1O43865 530 aa11.98□□□□□ -0.49
SND1-201ENST00000354725 PDE8BO95263 885 aa11.98□□□□□ -0.49
SND1-201ENST00000354725 EZRP15311 586 aaKnown RBP11.98□□□□□ -0.49
SND1-201ENST00000354725 KANK3Q6NY19 840 aa11.98□□□□□ -0.49
SND1-201ENST00000354725 DHX38Q92620 1227 aaKnown RBP11.98□□□□□ -0.49
SND1-201ENST00000354725 CDC5LQ99459 802 aaKnown RBP11.98□□□□□ -0.49
SND1-201ENST00000354725 BAZ2AQ9UIF9 1905 aaKnown RBP11.98□□□□□ -0.49
SND1-201ENST00000354725 GOLGA6L9A6NEM1 432 aa11.98□□□□□ -0.49
SND1-201ENST00000354725 TRIM64CA6NLI5 447 aa11.98□□□□□ -0.49
SND1-201ENST00000354725 ZEB2O60315 1214 aa11.98□□□□□ -0.49
SND1-201ENST00000354725 FESP07332 822 aa11.98□□□□□ -0.49
SND1-201ENST00000354725 SKIV2LQ15477 1246 aaKnown RBP11.98□□□□□ -0.49
SND1-201ENST00000354725 CWF19L1Q69YN2 538 aaKnown RBP11.98□□□□□ -0.49
SND1-201ENST00000354725 HDXQ7Z353 690 aa11.98□□□□□ -0.49
SND1-201ENST00000354725 CEP57Q86XR8 500 aa11.98□□□□□ -0.49
SND1-201ENST00000354725 DZIP1Q86YF9 867 aaKnown RBP11.98□□□□□ -0.49
SND1-201ENST00000354725 KIAA0825Q8IV33 1275 aa11.98□□□□□ -0.49
SND1-201ENST00000354725 MFN1Q8IWA4 741 aa11.98□□□□□ -0.49
SND1-201ENST00000354725 CACTIN-AS1Q8N1I8 211 aa11.98□□□□□ -0.49
SND1-201ENST00000354725 TBC1D16Q8TBP0 767 aa11.98□□□□□ -0.49
SND1-201ENST00000354725 NUP133Q8WUM0 1156 aa11.98□□□□□ -0.49
SND1-201ENST00000354725 PHKBQ93100 1093 aa11.98□□□□□ -0.49
SND1-201ENST00000354725 ZNF532Q9HCE3 1301 aa11.98□□□□□ -0.49
SND1-201ENST00000354725 ZBTB43O43298 467 aa11.98□□□□□ -0.49
SND1-201ENST00000354725 COL1A1P02452 1464 aaPredicted RBP11.98□□□□□ -0.49
SND1-201ENST00000354725 ZNF24P17028 368 aa11.98□□□□□ -0.49
SND1-201ENST00000354725 SCN4AP35499 1836 aa11.98□□□□□ -0.49
SND1-201ENST00000354725 ACBD5Q5T8D3 534 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms