RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 C17orf80Q9BSJ5 609 aa18.81■□□□□ 0.6
DDX55-202ENST00000354291 PRR12Q9ULL5 1215 aa18.81■□□□□ 0.6
DDX55-202ENST00000354291 GREB1LQ9C091 1923 aaPredicted RBP18.8■□□□□ 0.6
DDX55-202ENST00000354291 COL4A4P53420 1690 aaPredicted RBP18.8■□□□□ 0.6
DDX55-202ENST00000354291 RBM47A0AV96 593 aaKnown RBP18.8■□□□□ 0.6
DDX55-202ENST00000354291 SELPP16109 830 aa18.8■□□□□ 0.6
DDX55-202ENST00000354291 TDO2P48775 406 aa18.8■□□□□ 0.6
DDX55-202ENST00000354291 PPP2R5BQ15173 497 aa18.8■□□□□ 0.6
DDX55-202ENST00000354291 TCTN1Q2MV58 587 aa18.8■□□□□ 0.6
DDX55-202ENST00000354291 GIMAP6Q6P9H5 292 aa18.8■□□□□ 0.6
DDX55-202ENST00000354291 LRRC8DQ7L1W4 858 aa18.8■□□□□ 0.6
DDX55-202ENST00000354291 CAGE1Q8TC20 777 aa18.8■□□□□ 0.6
DDX55-202ENST00000354291 GMCL1Q96IK5 515 aa18.8■□□□□ 0.6
DDX55-202ENST00000354291 CTNNA3Q9UI47 895 aa18.8■□□□□ 0.6
DDX55-202ENST00000354291 RCAN3Q9UKA8 241 aa18.8■□□□□ 0.6
DDX55-202ENST00000354291 MTMR7Q9Y216 660 aa18.8■□□□□ 0.6
DDX55-202ENST00000354291 CFAP54Q96N23 3096 aa18.8■□□□□ 0.6
DDX55-202ENST00000354291 USP34Q70CQ2 3546 aa18.79■□□□□ 0.6
DDX55-202ENST00000354291 TRIP12Q14669 1992 aaPredicted RBP18.79■□□□□ 0.6
DDX55-202ENST00000354291 MYH4Q9Y623 1939 aa18.79■□□□□ 0.6
DDX55-202ENST00000354291 ABHD14A-ACY1A0A1B0GW23 586 aa18.79■□□□□ 0.6
DDX55-202ENST00000354291 PTPDC1A2A3K4 754 aa18.79■□□□□ 0.6
DDX55-202ENST00000354291 A6NJR5 290 aa18.79■□□□□ 0.6
DDX55-202ENST00000354291 HMMRO75330 724 aa18.79■□□□□ 0.6
DDX55-202ENST00000354291 TFAP4Q01664 338 aa18.79■□□□□ 0.6
DDX55-202ENST00000354291 ZP2Q05996 745 aa18.79■□□□□ 0.6
DDX55-202ENST00000354291 IKBKEQ14164 716 aa18.79■□□□□ 0.6
DDX55-202ENST00000354291 RCSD1Q6JBY9 416 aa18.79■□□□□ 0.6
DDX55-202ENST00000354291 NEDD1Q8NHV4 660 aa18.79■□□□□ 0.6
DDX55-202ENST00000354291 MRPL38Q96DV4 380 aaKnown RBP18.79■□□□□ 0.6
DDX55-202ENST00000354291 UPF3BQ9BZI7 483 aaKnown RBP18.79■□□□□ 0.6
DDX55-202ENST00000354291 ZBTB40Q9NUA8 1239 aa18.79■□□□□ 0.6
DDX55-202ENST00000354291 FAM50BQ9Y247 325 aa18.79■□□□□ 0.6
DDX55-202ENST00000354291 C5orf42Q9H799 3197 aa18.79■□□□□ 0.6
DDX55-202ENST00000354291 NKRFO15226 690 aaKnown RBP eCLIP18.78■□□□□ 0.6
DDX55-202ENST00000354291 NBNO60934 754 aa18.78■□□□□ 0.6
DDX55-202ENST00000354291 CALML3P27482 149 aa18.78■□□□□ 0.6
DDX55-202ENST00000354291 PDE4DQ08499 809 aa18.78■□□□□ 0.6
DDX55-202ENST00000354291 PTPROQ16827 1216 aa18.78■□□□□ 0.6
DDX55-202ENST00000354291 GDF6Q6KF10 455 aaPredicted RBP18.78■□□□□ 0.6
DDX55-202ENST00000354291 PLA2G6O60733 806 aa18.77■□□□□ 0.6
DDX55-202ENST00000354291 TXNP10599 105 aaKnown RBP18.77■□□□□ 0.6
DDX55-202ENST00000354291 BANK1Q8NDB2 785 aa18.77■□□□□ 0.6
DDX55-202ENST00000354291 PRKAG3Q9UGI9 489 aa18.77■□□□□ 0.6
DDX55-202ENST00000354291 INSL6Q9Y581 213 aa18.77■□□□□ 0.6
DDX55-202ENST00000354291 SCN10AQ9Y5Y9 1956 aa18.77■□□□□ 0.59
DDX55-202ENST00000354291 NFIBO00712 420 aa18.76■□□□□ 0.59
DDX55-202ENST00000354291 PARNO95453 639 aaKnown RBP18.76■□□□□ 0.59
DDX55-202ENST00000354291 CXCL10P02778 98 aa18.76■□□□□ 0.59
DDX55-202ENST00000354291 ICAM1P05362 532 aa18.76■□□□□ 0.59
DDX55-202ENST00000354291 CKBP12277 381 aa18.76■□□□□ 0.59
DDX55-202ENST00000354291 PDE4BQ07343 736 aa18.76■□□□□ 0.59
DDX55-202ENST00000354291 TCEAL5Q5H9L2 206 aa18.76■□□□□ 0.59
DDX55-202ENST00000354291 ADHFE1Q8IWW8 467 aa18.76■□□□□ 0.59
DDX55-202ENST00000354291 SCFD2Q8WU76 684 aa18.76■□□□□ 0.59
DDX55-202ENST00000354291 DHX38Q92620 1227 aaKnown RBP18.76■□□□□ 0.59
DDX55-202ENST00000354291 OSBP2Q969R2 916 aa18.76■□□□□ 0.59
DDX55-202ENST00000354291 CTAGE1Q96RT6 745 aa18.76■□□□□ 0.59
DDX55-202ENST00000354291 EPB41L4AQ9HCS5 686 aaPredicted RBP18.76■□□□□ 0.59
DDX55-202ENST00000354291 STX8Q9UNK0 236 aa18.76■□□□□ 0.59
DDX55-202ENST00000354291 ZNF318Q5VUA4 2279 aa18.76■□□□□ 0.59
DDX55-202ENST00000354291 PTPRSQ13332 1948 aa18.75■□□□□ 0.59
DDX55-202ENST00000354291 C19orf67A6NJJ6 358 aa18.75■□□□□ 0.59
DDX55-202ENST00000354291 ST18O60284 1047 aa18.75■□□□□ 0.59
DDX55-202ENST00000354291 EFCAB14O75071 495 aa18.75■□□□□ 0.59
DDX55-202ENST00000354291 RAB11FIP3O75154 756 aa18.75■□□□□ 0.59
DDX55-202ENST00000354291 IRS1P35568 1242 aa18.75■□□□□ 0.59
DDX55-202ENST00000354291 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.75■□□□□ 0.59
DDX55-202ENST00000354291 RASGRP2Q7LDG7 609 aa18.75■□□□□ 0.59
DDX55-202ENST00000354291 PABPC5Q96DU9 382 aaKnown RBP18.75■□□□□ 0.59
DDX55-202ENST00000354291 CLDND1Q9NY35 253 aa18.75■□□□□ 0.59
DDX55-202ENST00000354291 MUTYHQ9UIF7 546 aa18.75■□□□□ 0.59
DDX55-202ENST00000354291 ZFHX2Q9C0A1 2572 aaPredicted RBP18.74■□□□□ 0.59
DDX55-202ENST00000354291 LOC102724159A0A0B4J2E5 919 aa18.74■□□□□ 0.59
DDX55-202ENST00000354291 SLC16A2P36021 539 aa18.74■□□□□ 0.59
DDX55-202ENST00000354291 GPM6BQ13491 265 aa18.74■□□□□ 0.59
DDX55-202ENST00000354291 PWP2Q15269 919 aaKnown RBP18.74■□□□□ 0.59
DDX55-202ENST00000354291 CCDC96Q2M329 555 aa18.74■□□□□ 0.59
DDX55-202ENST00000354291 EPC2Q52LR7 807 aa18.74■□□□□ 0.59
DDX55-202ENST00000354291 TIGD5Q53EQ6 642 aa18.74■□□□□ 0.59
DDX55-202ENST00000354291 SLC30A10Q6XR72 485 aa18.74■□□□□ 0.59
DDX55-202ENST00000354291 MYOCDQ8IZQ8 938 aa18.74■□□□□ 0.59
DDX55-202ENST00000354291 AFG1LQ8WV93 481 aa18.74■□□□□ 0.59
DDX55-202ENST00000354291 MPHOSPH6Q99547 160 aaKnown RBP18.74■□□□□ 0.59
DDX55-202ENST00000354291 PATL2C9JE40 543 aaKnown RBP18.73■□□□□ 0.59
DDX55-202ENST00000354291 GPAA1O43292 621 aa18.73■□□□□ 0.59
DDX55-202ENST00000354291 CLUL1Q15846 466 aa18.73■□□□□ 0.59
DDX55-202ENST00000354291 IER5LQ5T953 404 aa18.73■□□□□ 0.59
DDX55-202ENST00000354291 TTBK2Q6IQ55 1244 aa18.73■□□□□ 0.59
DDX55-202ENST00000354291 RNF207Q6ZRF8 634 aa18.73■□□□□ 0.59
DDX55-202ENST00000354291 CHST3Q7LGC8 479 aa18.73■□□□□ 0.59
DDX55-202ENST00000354291 SIRT2Q8IXJ6 389 aa18.73■□□□□ 0.59
DDX55-202ENST00000354291 IFNL3Q8IZI9 196 aa18.73■□□□□ 0.59
DDX55-202ENST00000354291 PRSS33Q8NF86 280 aa18.73■□□□□ 0.59
DDX55-202ENST00000354291 TANC1Q9C0D5 1861 aa18.73■□□□□ 0.59
DDX55-202ENST00000354291 MYO7AQ13402 2215 aa18.73■□□□□ 0.59
DDX55-202ENST00000354291 ARIH2O95376 493 aa18.72■□□□□ 0.59
DDX55-202ENST00000354291 AMHP03971 560 aa18.72■□□□□ 0.59
DDX55-202ENST00000354291 SLC3A2P08195 630 aaKnown RBP18.72■□□□□ 0.59
DDX55-202ENST00000354291 GNAT2P19087 354 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms