RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 NEDD1Q8NHV4 660 aa13.49□□□□□ -0.25
DDX4-201ENST00000353507 GRAPLQ8TC17 118 aaPredicted RBP13.49□□□□□ -0.25
DDX4-201ENST00000353507 GPR101Q96P66 508 aaPredicted RBP13.49□□□□□ -0.25
DDX4-201ENST00000353507 MMTAG2Q9BU76 263 aaKnown RBP13.49□□□□□ -0.25
DDX4-201ENST00000353507 IFIH1Q9BYX4 1025 aaKnown RBP13.49□□□□□ -0.25
DDX4-201ENST00000353507 STK17AQ9UEE5 414 aa13.49□□□□□ -0.25
DDX4-201ENST00000353507 VWA3BQ502W6 1294 aa13.49□□□□□ -0.25
DDX4-201ENST00000353507 COBLL1Q53SF7 1204 aa13.49□□□□□ -0.25
DDX4-201ENST00000353507 FNBP4Q8N3X1 1017 aaPredicted RBP13.49□□□□□ -0.25
DDX4-201ENST00000353507 PURBQ96QR8 312 aaKnown RBP13.49□□□□□ -0.25
DDX4-201ENST00000353507 RAB34Q9BZG1 259 aa13.49□□□□□ -0.25
DDX4-201ENST00000353507 SEMA6BQ9H3T3 888 aa13.49□□□□□ -0.25
DDX4-201ENST00000353507 MMRN2Q9H8L6 949 aa13.49□□□□□ -0.25
DDX4-201ENST00000353507 FAM207AQ9NSI2 230 aaPredicted RBP13.49□□□□□ -0.25
DDX4-201ENST00000353507 DUSP10Q9Y6W6 482 aa13.49□□□□□ -0.25
DDX4-201ENST00000353507 MYH10P35580 1976 aa13.49□□□□□ -0.25
DDX4-201ENST00000353507 TULP2O00295 520 aa13.49□□□□□ -0.25
DDX4-201ENST00000353507 ZNF185O15231 689 aa13.49□□□□□ -0.25
DDX4-201ENST00000353507 IVLP07476 585 aa13.49□□□□□ -0.25
DDX4-201ENST00000353507 CENPPQ6IPU0 288 aa13.49□□□□□ -0.25
DDX4-201ENST00000353507 UNC13DQ70J99 1090 aa13.49□□□□□ -0.25
DDX4-201ENST00000353507 DYMQ7RTS9 669 aa13.49□□□□□ -0.25
DDX4-201ENST00000353507 KRT26Q7Z3Y9 468 aa13.49□□□□□ -0.25
DDX4-201ENST00000353507 LARP4BQ92615 738 aaKnown RBP13.49□□□□□ -0.25
DDX4-201ENST00000353507 CEP95Q96GE4 821 aa13.49□□□□□ -0.25
DDX4-201ENST00000353507 CRACR2AQ9BSW2 395 aa13.49□□□□□ -0.25
DDX4-201ENST00000353507 NDST4Q9H3R1 872 aa13.49□□□□□ -0.25
DDX4-201ENST00000353507 FAM204AQ9H8W3 233 aa13.49□□□□□ -0.25
DDX4-201ENST00000353507 TMEM260Q9NX78 707 aa13.49□□□□□ -0.25
DDX4-201ENST00000353507 RNF40O75150 1001 aa13.48□□□□□ -0.25
DDX4-201ENST00000353507 PLEKP08567 350 aaPredicted RBP13.48□□□□□ -0.25
DDX4-201ENST00000353507 PLCG2P16885 1265 aa13.48□□□□□ -0.25
DDX4-201ENST00000353507 C2orf54Q08AI8 447 aa13.48□□□□□ -0.25
DDX4-201ENST00000353507 NFIXQ14938 502 aa13.48□□□□□ -0.25
DDX4-201ENST00000353507 MAN2A1Q16706 1144 aa13.48□□□□□ -0.25
DDX4-201ENST00000353507 SLC51AQ86UW1 340 aa13.48□□□□□ -0.25
DDX4-201ENST00000353507 ALS2CR12Q96Q35 445 aa13.48□□□□□ -0.25
DDX4-201ENST00000353507 UBA5Q9GZZ9 404 aa13.48□□□□□ -0.25
DDX4-201ENST00000353507 TSPYL1Q9H0U9 437 aa13.48□□□□□ -0.25
DDX4-201ENST00000353507 PLAGL2Q9UPG8 496 aa13.48□□□□□ -0.25
DDX4-201ENST00000353507 ESYT2A0FGR8 921 aa13.48□□□□□ -0.25
DDX4-201ENST00000353507 AKR1B10O60218 316 aa13.48□□□□□ -0.25
DDX4-201ENST00000353507 ZMYND10O75800 440 aa13.48□□□□□ -0.25
DDX4-201ENST00000353507 SMARCA1P28370 1054 aa13.48□□□□□ -0.25
DDX4-201ENST00000353507 KIF11P52732 1056 aa13.48□□□□□ -0.25
DDX4-201ENST00000353507 GRB10Q13322 594 aa13.48□□□□□ -0.25
DDX4-201ENST00000353507 DRC1Q96MC2 740 aa13.48□□□□□ -0.25
DDX4-201ENST00000353507 HPCAL4Q9UM19 191 aa13.48□□□□□ -0.25
DDX4-201ENST00000353507 JRKLQ9Y4A0 524 aa13.48□□□□□ -0.25
DDX4-201ENST00000353507 FRMPD2Q68DX3 1309 aaPredicted RBP13.47□□□□□ -0.25
DDX4-201ENST00000353507 PVALEFA0A1B0GWK0 134 aa13.47□□□□□ -0.25
DDX4-201ENST00000353507 MYMKA6NI61 221 aa13.47□□□□□ -0.25
DDX4-201ENST00000353507 hCG_1984214I3L0E3 225 aa13.47□□□□□ -0.25
DDX4-201ENST00000353507 AARSP49588 968 aaKnown RBP eCLIP13.47□□□□□ -0.25
DDX4-201ENST00000353507 ADCY7P51828 1080 aa13.47□□□□□ -0.25
DDX4-201ENST00000353507 CCDC84Q86UT8 332 aaPredicted RBP13.47□□□□□ -0.25
DDX4-201ENST00000353507 ZNF713Q8N859 430 aaPredicted RBP13.47□□□□□ -0.25
DDX4-201ENST00000353507 SNX29Q8TEQ0 813 aa13.47□□□□□ -0.25
DDX4-201ENST00000353507 SMCR8Q8TEV9 937 aaPredicted RBP13.47□□□□□ -0.25
DDX4-201ENST00000353507 COG1Q8WTW3 980 aa13.47□□□□□ -0.25
DDX4-201ENST00000353507 GDAP1L1Q96MZ0 367 aa13.47□□□□□ -0.25
DDX4-201ENST00000353507 TSG101Q99816 390 aa13.47□□□□□ -0.25
DDX4-201ENST00000353507 SH2D4AQ9H788 454 aa13.47□□□□□ -0.25
DDX4-201ENST00000353507 PCDHA13Q9Y5I0 950 aa13.47□□□□□ -0.25
DDX4-201ENST00000353507 USP17L5A8MUK1 530 aa13.47□□□□□ -0.25
DDX4-201ENST00000353507 ZNF263O14978 683 aa13.47□□□□□ -0.25
DDX4-201ENST00000353507 NKRFO15226 690 aaKnown RBP eCLIP13.47□□□□□ -0.25
DDX4-201ENST00000353507 KRT79Q5XKE5 535 aa13.47□□□□□ -0.25
DDX4-201ENST00000353507 GSPT2Q8IYD1 628 aaKnown RBP13.47□□□□□ -0.25
DDX4-201ENST00000353507 GUF1Q8N442 669 aaKnown RBP13.47□□□□□ -0.25
DDX4-201ENST00000353507 AFAP1L1Q8TED9 768 aa13.47□□□□□ -0.25
DDX4-201ENST00000353507 TANGO6Q9C0B7 1094 aa13.47□□□□□ -0.25
DDX4-201ENST00000353507 BLOC1S4Q9NUP1 217 aa13.47□□□□□ -0.25
DDX4-201ENST00000353507 ARHGAP20Q9P2F6 1191 aa13.47□□□□□ -0.25
DDX4-201ENST00000353507 CCNL1Q9UK58 526 aaPredicted RBP13.47□□□□□ -0.25
DDX4-201ENST00000353507 SNX12Q9UMY4 172 aa13.47□□□□□ -0.25
DDX4-201ENST00000353507 ABCB11O95342 1321 aa13.46□□□□□ -0.25
DDX4-201ENST00000353507 PDE2AO00408 941 aaPredicted RBP13.46□□□□□ -0.25
DDX4-201ENST00000353507 HNRNPH3P31942 346 aaKnown RBP13.46□□□□□ -0.25
DDX4-201ENST00000353507 EIF4A3P38919 411 aaKnown RBP13.46□□□□□ -0.25
DDX4-201ENST00000353507 FXR2P51116 673 aaKnown RBP eCLIP13.46□□□□□ -0.25
DDX4-201ENST00000353507 LRRC63Q05C16 580 aa13.46□□□□□ -0.25
DDX4-201ENST00000353507 ARHGEF1Q92888 912 aaKnown RBP13.46□□□□□ -0.25
DDX4-201ENST00000353507 LRRC27Q9C0I9 530 aa13.46□□□□□ -0.25
DDX4-201ENST00000353507 SIK3Q9Y2K2 1263 aa13.46□□□□□ -0.25
DDX4-201ENST00000353507 CAPN6Q9Y6Q1 641 aa13.46□□□□□ -0.25
DDX4-201ENST00000353507 GPR75-ASB3A0A0A6YYF3 556 aa13.46□□□□□ -0.26
DDX4-201ENST00000353507 POTEMA6NI47 508 aa13.46□□□□□ -0.26
DDX4-201ENST00000353507 UFL1O94874 794 aa13.46□□□□□ -0.26
DDX4-201ENST00000353507 MOCS3O95396 460 aa13.46□□□□□ -0.26
DDX4-201ENST00000353507 TDP2O95551 362 aa13.46□□□□□ -0.26
DDX4-201ENST00000353507 RRAGAQ7L523 313 aa13.46□□□□□ -0.26
DDX4-201ENST00000353507 PTF1AQ7RTS3 328 aa13.46□□□□□ -0.26
DDX4-201ENST00000353507 CACNA2D4Q7Z3S7 1137 aa13.46□□□□□ -0.26
DDX4-201ENST00000353507 CNBD1Q8NA66 436 aa13.46□□□□□ -0.26
DDX4-201ENST00000353507 PNMA5Q96PV4 448 aa13.46□□□□□ -0.26
DDX4-201ENST00000353507 MTMR9Q96QG7 549 aa13.46□□□□□ -0.26
DDX4-201ENST00000353507 SELENOOQ9BVL4 669 aa13.46□□□□□ -0.26
DDX4-201ENST00000353507 MLXIPQ9HAP2 919 aa13.46□□□□□ -0.26
DDX4-201ENST00000353507 LRRC53A6NM62 1247 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms