RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 MAGOHP61326 146 aaKnown RBP8.42□□□□□ -1.06
BRCA1-201ENST00000352993 GFPT1Q06210 699 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-201ENST00000352993 IFIT5Q13325 482 aaKnown RBP8.42□□□□□ -1.06
BRCA1-201ENST00000352993 KCNB1Q14721 858 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 ESCO1Q5FWF5 840 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 CAPRIN2Q6IMN6 1127 aaKnown RBP8.42□□□□□ -1.06
BRCA1-201ENST00000352993 TAX1BP1Q86VP1 789 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 DDX42Q86XP3 938 aaKnown RBP eCLIP8.42□□□□□ -1.06
BRCA1-201ENST00000352993 CUL5Q93034 780 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 MAGOHBQ96A72 148 aaKnown RBP8.42□□□□□ -1.06
BRCA1-201ENST00000352993 SPAG5Q96R06 1193 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 GOPCQ9HD26 462 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 PHF8Q9UPP1 1060 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 SLIT2O94813 1529 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 CTNND1O60716 968 aaKnown RBP8.42□□□□□ -1.06
BRCA1-201ENST00000352993 SRGNP10124 158 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 TNNC1P63316 161 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 LDHAL6AQ6ZMR3 332 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 MAGEB6Q8N7X4 407 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 WHAMMQ8TF30 809 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 LMBR1Q8WVP7 490 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 RAPGEF5Q92565 580 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 FAM167BQ9BTA0 163 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 NACAP1Q9BZK3 213 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 TRIM31Q9BZY9 425 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 SLC52A2Q9HAB3 445 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 NLRC4Q9NPP4 1024 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 PIH1D3Q9NQM4 214 aaKnown RBP8.42□□□□□ -1.06
BRCA1-201ENST00000352993 EME2A4GXA9 379 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-201ENST00000352993 H7C1W4 665 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 ANP32DO95626 131 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 VIMP08670 466 aaKnown RBP8.42□□□□□ -1.06
BRCA1-201ENST00000352993 PDE6AP16499 860 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 PPP2R2AP63151 447 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 NBPF9Q3BBW0 867 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 FAM114A1Q8IWE2 563 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 CCDC197Q8NCU1 140 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 MDM1Q8TC05 714 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 RUBCNQ92622 972 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 GGT7Q9UJ14 662 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 STK38LQ9Y2H1 464 aa8.42□□□□□ -1.06
BRCA1-201ENST00000352993 PDS5AQ29RF7 1337 aaKnown RBP8.42□□□□□ -1.06
BRCA1-201ENST00000352993 NUP188Q5SRE5 1749 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 PRKAB2O43741 272 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 DIAPH2O60879 1101 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 PDE4DQ08499 809 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 MEA1Q16626 185 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 C6orf89Q6UWU4 347 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 TOM1L2Q6ZVM7 507 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 ADSSL1Q8N142 457 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 KCNH5Q8NCM2 988 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 LRRC45Q96CN5 670 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 PYM1Q9BRP8 204 aaKnown RBP8.41□□□□□ -1.06
BRCA1-201ENST00000352993 THAP9Q9H5L6 903 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 TMBIM4Q9HC24 238 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 MTMR7Q9Y216 660 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 RAD51CO43502 376 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 PALMO75781 387 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 AP1G2O75843 785 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 CABP4P57796 275 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 ZC3H6P61129 1189 aaKnown RBP8.41□□□□□ -1.06
BRCA1-201ENST00000352993 ASIC1P78348 528 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 ELF3P78545 371 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-201ENST00000352993 MIGA1Q8NAN2 632 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 RETREG2Q8NC44 543 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 ZNF507Q8TCN5 953 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 FAM89AQ96GI7 184 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 MTRQ99707 1265 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 SH3GL3Q99963 347 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 TLR10Q9BXR5 811 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 ARHGAP20Q9P2F6 1191 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 SBF2Q86WG5 1849 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 PP2D1A8MPX8 630 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 KCNK3O14649 394 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 TRAPPC3O43617 180 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 CEP104O60308 925 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 HSD17B3P37058 310 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 SLC1A4P43007 532 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 CASP7P55210 303 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 RBBP5Q15291 538 aaKnown RBP8.41□□□□□ -1.06
BRCA1-201ENST00000352993 CDC37Q16543 378 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-201ENST00000352993 TRIM68Q6AZZ1 485 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 FAM43BQ6ZT52 329 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-201ENST00000352993 TMTC2Q8N394 836 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 HELBQ8NG08 1087 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-201ENST00000352993 PARD3BQ8TEW8 1205 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.41□□□□□ -1.06
BRCA1-201ENST00000352993 HOOK2Q96ED9 719 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 MRC1P22897 1456 aa8.41□□□□□ -1.06
BRCA1-201ENST00000352993 MPHOSPH10O00566 681 aaKnown RBP8.4□□□□□ -1.06
BRCA1-201ENST00000352993 TRIM37O94972 964 aa8.4□□□□□ -1.06
BRCA1-201ENST00000352993 MYBL1P10243 752 aa8.4□□□□□ -1.06
BRCA1-201ENST00000352993 ITIH3Q06033 890 aa8.4□□□□□ -1.06
BRCA1-201ENST00000352993 PDXDC2PQ6P474 469 aa8.4□□□□□ -1.06
BRCA1-201ENST00000352993 POTEAQ6S8J7 498 aa8.4□□□□□ -1.06
BRCA1-201ENST00000352993 SPDYE1Q8NFV5 336 aaPredicted RBP8.4□□□□□ -1.06
BRCA1-201ENST00000352993 PIK3R5Q8WYR1 880 aa8.4□□□□□ -1.06
BRCA1-201ENST00000352993 MTMR8Q96EF0 704 aa8.4□□□□□ -1.06
BRCA1-201ENST00000352993 STRBPQ96SI9 672 aaKnown RBP8.4□□□□□ -1.06
BRCA1-201ENST00000352993 AP1M1Q9BXS5 423 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms