RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 ADGBQ8N7X0 1667 aa19.01■□□□□ 0.63
SPAST-202ENST00000345662 CCDC188H7C350 402 aa19.01■□□□□ 0.63
SPAST-202ENST00000345662 GIPC1O14908 333 aa19.01■□□□□ 0.63
SPAST-202ENST00000345662 COG1Q8WTW3 980 aa19.01■□□□□ 0.63
SPAST-202ENST00000345662 HVCN1Q96D96 273 aa19.01■□□□□ 0.63
SPAST-202ENST00000345662 COL4A3BPQ9Y5P4 624 aa19.01■□□□□ 0.63
SPAST-202ENST00000345662 BFSP1Q12934 665 aa19.01■□□□□ 0.63
SPAST-202ENST00000345662 PPP2R5DQ14738 602 aa19.01■□□□□ 0.63
SPAST-202ENST00000345662 TMTC3Q6ZXV5 915 aa19.01■□□□□ 0.63
SPAST-202ENST00000345662 SDR42E1Q8WUS8 393 aa19.01■□□□□ 0.63
SPAST-202ENST00000345662 M0R2C6 588 aa19.01■□□□□ 0.63
SPAST-202ENST00000345662 MRPS25P82663 173 aaKnown RBP19.01■□□□□ 0.63
SPAST-202ENST00000345662 POLA2Q14181 598 aa19.01■□□□□ 0.63
SPAST-202ENST00000345662 NLRP14Q86W24 1093 aa19.01■□□□□ 0.63
SPAST-202ENST00000345662 NLRP7Q8WX94 980 aa19.01■□□□□ 0.63
SPAST-202ENST00000345662 YIPF3Q9GZM5 350 aa19.01■□□□□ 0.63
SPAST-202ENST00000345662 PCP11498 1178 aaKnown RBP19.01■□□□□ 0.63
SPAST-202ENST00000345662 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.01■□□□□ 0.63
SPAST-202ENST00000345662 ABTB1Q969K4 478 aaPredicted RBP19.01■□□□□ 0.63
SPAST-202ENST00000345662 KLC4Q9NSK0 619 aa19.01■□□□□ 0.63
SPAST-202ENST00000345662 PCDHB6Q9Y5E3 794 aa19.01■□□□□ 0.63
SPAST-202ENST00000345662 DAPK3O43293 454 aa19■□□□□ 0.63
SPAST-202ENST00000345662 TCIRG1Q13488 830 aa19■□□□□ 0.63
SPAST-202ENST00000345662 TMED2Q15363 201 aa19■□□□□ 0.63
SPAST-202ENST00000345662 GSPT2Q8IYD1 628 aaKnown RBP19■□□□□ 0.63
SPAST-202ENST00000345662 FAM133AQ8N9E0 248 aa19■□□□□ 0.63
SPAST-202ENST00000345662 DR1Q01658 176 aa19■□□□□ 0.63
SPAST-202ENST00000345662 TRIM42Q8IWZ5 723 aa19■□□□□ 0.63
SPAST-202ENST00000345662 CABLES1Q8TDN4 633 aa19■□□□□ 0.63
SPAST-202ENST00000345662 SH2B2O14492 632 aaPredicted RBP19■□□□□ 0.63
SPAST-202ENST00000345662 LMNAP02545 664 aaKnown RBP19■□□□□ 0.63
SPAST-202ENST00000345662 NR2F2P24468 414 aa19■□□□□ 0.63
SPAST-202ENST00000345662 AATKQ6ZMQ8 1374 aa19■□□□□ 0.63
SPAST-202ENST00000345662 KLRF2D3W0D1 207 aa19■□□□□ 0.63
SPAST-202ENST00000345662 MAPK13O15264 365 aa19■□□□□ 0.63
SPAST-202ENST00000345662 GDAP1Q8TB36 358 aa19■□□□□ 0.63
SPAST-202ENST00000345662 CENPKQ9BS16 269 aa19■□□□□ 0.63
SPAST-202ENST00000345662 AP1M1Q9BXS5 423 aa19■□□□□ 0.63
SPAST-202ENST00000345662 SUDS3Q9H7L9 328 aaPredicted RBP19■□□□□ 0.63
SPAST-202ENST00000345662 NDST4Q9H3R1 872 aa18.99■□□□□ 0.63
SPAST-202ENST00000345662 SH2D4AQ9H788 454 aa18.99■□□□□ 0.63
SPAST-202ENST00000345662 INHBAP08476 426 aa18.99■□□□□ 0.63
SPAST-202ENST00000345662 CCZ1BP86790 482 aa18.99■□□□□ 0.63
SPAST-202ENST00000345662 CCZ1P86791 482 aaPredicted RBP18.99■□□□□ 0.63
SPAST-202ENST00000345662 MAPKAPK5Q8IW41 473 aa18.99■□□□□ 0.63
SPAST-202ENST00000345662 SLFN12Q8IYM2 578 aa18.99■□□□□ 0.63
SPAST-202ENST00000345662 ARMC2Q8NEN0 867 aa18.99■□□□□ 0.63
SPAST-202ENST00000345662 SMCR8Q8TEV9 937 aaPredicted RBP18.99■□□□□ 0.63
SPAST-202ENST00000345662 DDX39AO00148 427 aaKnown RBP18.99■□□□□ 0.63
SPAST-202ENST00000345662 AFPP02771 609 aaKnown RBP18.99■□□□□ 0.63
SPAST-202ENST00000345662 TNNI1P19237 187 aa18.99■□□□□ 0.63
SPAST-202ENST00000345662 SLC8A3P57103 927 aa18.99■□□□□ 0.63
SPAST-202ENST00000345662 HADHQ16836 314 aaKnown RBP18.99■□□□□ 0.63
SPAST-202ENST00000345662 SGO2Q562F6 1265 aa18.99■□□□□ 0.63
SPAST-202ENST00000345662 ZNF449Q6P9G9 518 aa18.99■□□□□ 0.63
SPAST-202ENST00000345662 PPM1KQ8N3J5 372 aa18.99■□□□□ 0.63
SPAST-202ENST00000345662 ANAPC5Q9UJX4 755 aa18.99■□□□□ 0.63
SPAST-202ENST00000345662 E4F1Q66K89 784 aaPredicted RBP18.99■□□□□ 0.63
SPAST-202ENST00000345662 NXNQ6DKJ4 435 aa18.99■□□□□ 0.63
SPAST-202ENST00000345662 CYP4F22Q6NT55 531 aa18.99■□□□□ 0.63
SPAST-202ENST00000345662 WDR24Q96S15 920 aa18.99■□□□□ 0.63
SPAST-202ENST00000345662 SPECC1L-ADORA2AF8WAN1 911 aa18.98■□□□□ 0.63
SPAST-202ENST00000345662 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.98■□□□□ 0.63
SPAST-202ENST00000345662 DDX25Q9UHL0 483 aaKnown RBP18.98■□□□□ 0.63
SPAST-202ENST00000345662 FAM178BQ8IXR5 827 aa18.98■□□□□ 0.63
SPAST-202ENST00000345662 ST13P4Q8IZP2 240 aaPredicted RBP18.98■□□□□ 0.63
SPAST-202ENST00000345662 EYA3Q99504 573 aa18.98■□□□□ 0.63
SPAST-202ENST00000345662 PCDHA4Q9UN74 947 aa18.98■□□□□ 0.63
SPAST-202ENST00000345662 CTSWP56202 376 aa18.98■□□□□ 0.63
SPAST-202ENST00000345662 VSNL1P62760 191 aa18.98■□□□□ 0.63
SPAST-202ENST00000345662 TTLL7Q6ZT98 887 aa18.98■□□□□ 0.63
SPAST-202ENST00000345662 TGFBRAP1Q8WUH2 860 aa18.98■□□□□ 0.63
SPAST-202ENST00000345662 AIFM3Q96NN9 605 aa18.98■□□□□ 0.63
SPAST-202ENST00000345662 TBK1Q9UHD2 729 aa18.98■□□□□ 0.63
SPAST-202ENST00000345662 TMCO4Q5TGY1 634 aa18.98■□□□□ 0.63
SPAST-202ENST00000345662 GJA10Q969M2 543 aa18.98■□□□□ 0.63
SPAST-202ENST00000345662 TARSL2A2RTX5 802 aaKnown RBP18.97■□□□□ 0.63
SPAST-202ENST00000345662 MYO1FO00160 1098 aa18.97■□□□□ 0.63
SPAST-202ENST00000345662 MYO1EQ12965 1108 aa18.97■□□□□ 0.63
SPAST-202ENST00000345662 VTI1AQ96AJ9 217 aa18.97■□□□□ 0.63
SPAST-202ENST00000345662 CXorf56Q9H5V9 222 aa18.97■□□□□ 0.63
SPAST-202ENST00000345662 PSD3Q9NYI0 1048 aa18.97■□□□□ 0.63
SPAST-202ENST00000345662 PLEKHG3A1L390 1219 aa18.97■□□□□ 0.63
SPAST-202ENST00000345662 CIAO1O76071 339 aa18.97■□□□□ 0.63
SPAST-202ENST00000345662 USH1GQ495M9 461 aa18.97■□□□□ 0.63
SPAST-202ENST00000345662 BEND6Q5SZJ8 279 aaPredicted RBP18.97■□□□□ 0.63
SPAST-202ENST00000345662 SPDL1Q96EA4 605 aa18.97■□□□□ 0.63
SPAST-202ENST00000345662 VIPAS39Q9H9C1 493 aa18.97■□□□□ 0.63
SPAST-202ENST00000345662 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.97■□□□□ 0.63
SPAST-202ENST00000345662 ATP5HO75947 161 aa18.97■□□□□ 0.63
SPAST-202ENST00000345662 SLC12A2P55011 1212 aa18.97■□□□□ 0.63
SPAST-202ENST00000345662 MUM1L1Q5H9M0 696 aa18.97■□□□□ 0.63
SPAST-202ENST00000345662 BSPRYQ5W0U4 402 aa18.97■□□□□ 0.63
SPAST-202ENST00000345662 C1orf112Q9NSG2 853 aa18.97■□□□□ 0.63
SPAST-202ENST00000345662 CREB3O43889 395 aa18.97■□□□□ 0.63
SPAST-202ENST00000345662 DCTN3O75935 186 aa18.97■□□□□ 0.63
SPAST-202ENST00000345662 YWHAGP61981 247 aaKnown RBP eCLIP18.97■□□□□ 0.63
SPAST-202ENST00000345662 ESRRGP62508 458 aa18.97■□□□□ 0.63
SPAST-202ENST00000345662 PPP2R2AP63151 447 aa18.97■□□□□ 0.63
SPAST-202ENST00000345662 PSTPIP2Q9H939 334 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms