RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 LARP4BQ92615 738 aaKnown RBP21.31■■□□□ 1
LYSMD4-202ENST00000344791 UBXN6Q9BZV1 441 aa21.31■■□□□ 1
LYSMD4-202ENST00000344791 BLOC1S4Q9NUP1 217 aa21.31■■□□□ 1
LYSMD4-202ENST00000344791 KRT83P78385 493 aa21.31■■□□□ 1
LYSMD4-202ENST00000344791 CNNM4Q6P4Q7 775 aa21.31■■□□□ 1
LYSMD4-202ENST00000344791 C7orf25Q9BPX7 421 aa21.31■■□□□ 1
LYSMD4-202ENST00000344791 TTYH3Q9C0H2 523 aa21.31■■□□□ 1
LYSMD4-202ENST00000344791 DEF6Q9H4E7 631 aa21.31■■□□□ 1
LYSMD4-202ENST00000344791 MYO1AQ9UBC5 1043 aa21.31■■□□□ 1
LYSMD4-202ENST00000344791 USP21Q9UK80 565 aa21.31■■□□□ 1
LYSMD4-202ENST00000344791 FAM196BA6NMK8 535 aa21.3■■□□□ 1
LYSMD4-202ENST00000344791 MATR3P43243 847 aaKnown RBP eCLIP21.3■■□□□ 1
LYSMD4-202ENST00000344791 DNA2P51530 1060 aa21.3■■□□□ 1
LYSMD4-202ENST00000344791 ADCY7P51828 1080 aa21.3■■□□□ 1
LYSMD4-202ENST00000344791 CASP8Q14790 479 aa21.3■■□□□ 1
LYSMD4-202ENST00000344791 VPS72Q15906 364 aa21.3■■□□□ 1
LYSMD4-202ENST00000344791 ENOX2Q16206 610 aaKnown RBP21.3■■□□□ 1
LYSMD4-202ENST00000344791 L1RE1Q9UN81 338 aa21.3■■□□□ 1
LYSMD4-202ENST00000344791 SERPINB2P05120 415 aa21.3■■□□□ 1
LYSMD4-202ENST00000344791 MYL1P05976 194 aa21.3■■□□□ 1
LYSMD4-202ENST00000344791 TRAPPC11Q7Z392 1133 aa21.3■■□□□ 1
LYSMD4-202ENST00000344791 PNMA5Q96PV4 448 aa21.3■■□□□ 1
LYSMD4-202ENST00000344791 DAGLAQ9Y4D2 1042 aa21.3■■□□□ 1
LYSMD4-202ENST00000344791 MAP2K7O14733 419 aa21.3■■□□□ 1
LYSMD4-202ENST00000344791 ZNF263O14978 683 aa21.3■■□□□ 1
LYSMD4-202ENST00000344791 CXCR5P32302 372 aa21.3■■□□□ 1
LYSMD4-202ENST00000344791 ZBED6P86452 979 aa21.3■■□□□ 1
LYSMD4-202ENST00000344791 MLXIPQ9HAP2 919 aa21.3■■□□□ 1
LYSMD4-202ENST00000344791 DDX4Q9NQI0 724 aaKnown RBP21.3■■□□□ 1
LYSMD4-202ENST00000344791 RAB21Q9UL25 225 aa21.3■■□□□ 1
LYSMD4-202ENST00000344791 FAN1Q9Y2M0 1017 aa21.3■■□□□ 1
LYSMD4-202ENST00000344791 LRRIQ3A6PVS8 624 aaPredicted RBP21.29■■□□□ 1
LYSMD4-202ENST00000344791 TBC1D16Q8TBP0 767 aa21.29■■□□□ 1
LYSMD4-202ENST00000344791 DDX12PQ92771 950 aa21.29■■□□□ 1
LYSMD4-202ENST00000344791 SMARCAL1Q9NZC9 954 aa21.29■■□□□ 1
LYSMD4-202ENST00000344791 C2orf54Q08AI8 447 aa21.29■■□□□ 1
LYSMD4-202ENST00000344791 ECM1Q16610 540 aa21.29■■□□□ 1
LYSMD4-202ENST00000344791 DOK7Q18PE1 504 aa21.29■■□□□ 1
LYSMD4-202ENST00000344791 TMEM266Q2M3C6 531 aa21.29■■□□□ 1
LYSMD4-202ENST00000344791 RRAGAQ7L523 313 aa21.29■■□□□ 1
LYSMD4-202ENST00000344791 FAM114A1Q8IWE2 563 aa21.29■■□□□ 1
LYSMD4-202ENST00000344791 CUEDC2Q9H467 287 aa21.29■■□□□ 1
LYSMD4-202ENST00000344791 ZHX3Q9H4I2 956 aa21.29■■□□□ 1
LYSMD4-202ENST00000344791 MTMR4Q9NYA4 1195 aa21.29■■□□□ 1
LYSMD4-202ENST00000344791 POTEB2H3BUK9 544 aa21.28■■□□□ 1
LYSMD4-202ENST00000344791 FAM193AP78312 1265 aa21.28■■□□□ 1
LYSMD4-202ENST00000344791 KIF5AQ12840 1032 aa21.28■■□□□ 1
LYSMD4-202ENST00000344791 NLRC4Q9NPP4 1024 aa21.28■■□□□ 1
LYSMD4-202ENST00000344791 PSMD14O00487 310 aa21.28■■□□□ 1
LYSMD4-202ENST00000344791 CACNB3P54284 484 aa21.28■■□□□ 1
LYSMD4-202ENST00000344791 APBA1Q02410 837 aa21.28■■□□□ 1
LYSMD4-202ENST00000344791 SPA17Q15506 151 aa21.28■■□□□ 1
LYSMD4-202ENST00000344791 SHROOM1Q2M3G4 852 aaPredicted RBP21.28■■□□□ 1
LYSMD4-202ENST00000344791 NELFCDQ8IXH7 590 aa21.28■■□□□ 1
LYSMD4-202ENST00000344791 NDST4Q9H3R1 872 aa21.28■■□□□ 1
LYSMD4-202ENST00000344791 NOC3LQ8WTT2 800 aaKnown RBP21.27■■□□□ 1
LYSMD4-202ENST00000344791 CAPN6Q9Y6Q1 641 aa21.27■■□□□ 1
LYSMD4-202ENST00000344791 NAV1Q8NEY1 1877 aa21.27■■□□□ 1
LYSMD4-202ENST00000344791 PDE2AO00408 941 aaPredicted RBP21.27■■□□□ 1
LYSMD4-202ENST00000344791 EDIL3O43854 480 aa21.27■■□□□ 1
LYSMD4-202ENST00000344791 MOCS3O95396 460 aa21.27■■□□□ 1
LYSMD4-202ENST00000344791 MEA1Q16626 185 aa21.27■■□□□ 1
LYSMD4-202ENST00000344791 SKIDA1Q1XH10 827 aa21.27■■□□□ 1
LYSMD4-202ENST00000344791 KRT79Q5XKE5 535 aa21.27■■□□□ 1
LYSMD4-202ENST00000344791 ADGRF4Q8IZF3 695 aa21.27■■□□□ 1
LYSMD4-202ENST00000344791 CRACR2AQ9BSW2 395 aa21.27■■□□□ 1
LYSMD4-202ENST00000344791 IFIH1Q9BYX4 1025 aaKnown RBP21.27■■□□□ 1
LYSMD4-202ENST00000344791 PLEKHA4Q9H4M7 779 aa21.27■■□□□ 1
LYSMD4-202ENST00000344791 EHD2Q9NZN4 543 aa21.27■■□□□ 1
LYSMD4-202ENST00000344791 MAST2Q6P0Q8 1798 aa21.27■■□□□ 1
LYSMD4-202ENST00000344791 AKR1B10O60218 316 aa21.26■□□□□ 0.99
LYSMD4-202ENST00000344791 PLCG2P16885 1265 aa21.26■□□□□ 0.99
LYSMD4-202ENST00000344791 ATP2B4P23634 1241 aa21.26■□□□□ 0.99
LYSMD4-202ENST00000344791 GPS2Q13227 327 aa21.26■□□□□ 0.99
LYSMD4-202ENST00000344791 ARHGAP20Q9P2F6 1191 aa21.26■□□□□ 0.99
LYSMD4-202ENST00000344791 LRRC53A6NM62 1247 aa21.26■□□□□ 0.99
LYSMD4-202ENST00000344791 PPP1R11O60927 126 aaPredicted RBP21.26■□□□□ 0.99
LYSMD4-202ENST00000344791 EIF4A3P38919 411 aaKnown RBP21.26■□□□□ 0.99
LYSMD4-202ENST00000344791 ARID5AQ03989 594 aa21.26■□□□□ 0.99
LYSMD4-202ENST00000344791 TUBB2AQ13885 445 aa21.26■□□□□ 0.99
LYSMD4-202ENST00000344791 VWA3BQ502W6 1294 aa21.26■□□□□ 0.99
LYSMD4-202ENST00000344791 RIN2Q8WYP3 895 aaPredicted RBP21.26■□□□□ 0.99
LYSMD4-202ENST00000344791 SECISBP2LQ93073 1101 aaKnown RBP21.26■□□□□ 0.99
LYSMD4-202ENST00000344791 MTMR9Q96QG7 549 aa21.26■□□□□ 0.99
LYSMD4-202ENST00000344791 TUBB2BQ9BVA1 445 aa21.26■□□□□ 0.99
LYSMD4-202ENST00000344791 NUP58Q9BVL2 599 aa21.26■□□□□ 0.99
LYSMD4-202ENST00000344791 FGFBP2Q9BYJ0 223 aa21.26■□□□□ 0.99
LYSMD4-202ENST00000344791 NPHP3-ACAD11A0A0J9YXS1 232 aa21.26■□□□□ 0.99
LYSMD4-202ENST00000344791 USP17L15C9J2P7 530 aa21.26■□□□□ 0.99
LYSMD4-202ENST00000344791 USP17L10C9JJH3 530 aa21.26■□□□□ 0.99
LYSMD4-202ENST00000344791 USP17L13C9JLJ4 530 aa21.26■□□□□ 0.99
LYSMD4-202ENST00000344791 USP17L11C9JVI0 530 aa21.26■□□□□ 0.99
LYSMD4-202ENST00000344791 USP17L18D6R9N7 530 aa21.26■□□□□ 0.99
LYSMD4-202ENST00000344791 USP17L22D6RA61 530 aa21.26■□□□□ 0.99
LYSMD4-202ENST00000344791 USP17L17D6RBQ6 530 aa21.26■□□□□ 0.99
LYSMD4-202ENST00000344791 USP17L19D6RCP7 530 aa21.26■□□□□ 0.99
LYSMD4-202ENST00000344791 USP17L20D6RJB6 530 aa21.26■□□□□ 0.99
LYSMD4-202ENST00000344791 NAP1L1P55209 391 aaKnown RBP21.26■□□□□ 0.99
LYSMD4-202ENST00000344791 USP17L24Q0WX57 530 aa21.26■□□□□ 0.99
LYSMD4-202ENST00000344791 USP17L6PQ6QN14 398 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms