RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 PROCA1Q8NCQ7 364 aaPredicted RBP18.12■□□□□ 0.49
SMARCA4-201ENST00000344626 USP28Q96RU2 1077 aa18.12■□□□□ 0.49
SMARCA4-201ENST00000344626 XPOTO43592 962 aaKnown RBP18.11■□□□□ 0.49
SMARCA4-201ENST00000344626 ANKFY1Q9P2R3 1169 aa18.11■□□□□ 0.49
SMARCA4-201ENST00000344626 MTMR6Q9Y217 621 aa18.11■□□□□ 0.49
SMARCA4-201ENST00000344626 PAXBP1Q9Y5B6 917 aa18.11■□□□□ 0.49
SMARCA4-201ENST00000344626 C19orf81C9J6K1 198 aa18.11■□□□□ 0.49
SMARCA4-201ENST00000344626 PSAPP07602 524 aa18.11■□□□□ 0.49
SMARCA4-201ENST00000344626 FBXO33Q7Z6M2 555 aa18.11■□□□□ 0.49
SMARCA4-201ENST00000344626 UPF1Q92900 1129 aaKnown RBP eCLIP18.11■□□□□ 0.49
SMARCA4-201ENST00000344626 GTPBP6O43824 516 aaPredicted RBP18.11■□□□□ 0.49
SMARCA4-201ENST00000344626 GSTA5Q7RTV2 222 aa18.11■□□□□ 0.49
SMARCA4-201ENST00000344626 NACC1Q96RE7 527 aa18.11■□□□□ 0.49
SMARCA4-201ENST00000344626 ATP2A1O14983 1001 aa18.11■□□□□ 0.49
SMARCA4-201ENST00000344626 NSUN7Q8NE18 718 aaKnown RBP18.11■□□□□ 0.49
SMARCA4-201ENST00000344626 PSMD1Q99460 953 aa18.11■□□□□ 0.49
SMARCA4-201ENST00000344626 PXDNLA1KZ92 1463 aa18.11■□□□□ 0.49
SMARCA4-201ENST00000344626 GIMAP8Q8ND71 665 aaPredicted RBP18.1■□□□□ 0.49
SMARCA4-201ENST00000344626 LBHD1Q9BQE6 289 aaPredicted RBP18.1■□□□□ 0.49
SMARCA4-201ENST00000344626 NUCKS1Q9H1E3 243 aaKnown RBP18.1■□□□□ 0.49
SMARCA4-201ENST00000344626 NECTIN1Q15223 517 aa18.1■□□□□ 0.49
SMARCA4-201ENST00000344626 H0YHG0 523 aa18.1■□□□□ 0.49
SMARCA4-201ENST00000344626 ZBTB24O43167 697 aaPredicted RBP18.1■□□□□ 0.49
SMARCA4-201ENST00000344626 CAPN15O75808 1086 aa18.1■□□□□ 0.49
SMARCA4-201ENST00000344626 CLEC10AQ8IUN9 316 aa18.1■□□□□ 0.49
SMARCA4-201ENST00000344626 PNPLA7Q6ZV29 1317 aa18.1■□□□□ 0.49
SMARCA4-201ENST00000344626 WDR19Q8NEZ3 1342 aa18.1■□□□□ 0.49
SMARCA4-201ENST00000344626 TRIML1Q8N9V2 468 aa18.1■□□□□ 0.49
SMARCA4-201ENST00000344626 TSPYL1Q9H0U9 437 aa18.1■□□□□ 0.49
SMARCA4-201ENST00000344626 KIAA1024Q9UPX6 916 aa18.1■□□□□ 0.49
SMARCA4-201ENST00000344626 CTAGE9A4FU28 777 aa18.09■□□□□ 0.49
SMARCA4-201ENST00000344626 MMP1P03956 469 aa18.09■□□□□ 0.49
SMARCA4-201ENST00000344626 C6orf222P0C671 652 aaPredicted RBP18.09■□□□□ 0.49
SMARCA4-201ENST00000344626 GAP43P17677 238 aa18.09■□□□□ 0.49
SMARCA4-201ENST00000344626 TTLL4Q14679 1199 aa18.09■□□□□ 0.49
SMARCA4-201ENST00000344626 GPC2Q8N158 579 aa18.09■□□□□ 0.49
SMARCA4-201ENST00000344626 FLT1P17948 1338 aa18.09■□□□□ 0.49
SMARCA4-201ENST00000344626 NBPF11Q86T75 865 aa18.09■□□□□ 0.49
SMARCA4-201ENST00000344626 ZBTB5O15062 677 aa18.09■□□□□ 0.49
SMARCA4-201ENST00000344626 XRCC5P13010 732 aaKnown RBP18.09■□□□□ 0.49
SMARCA4-201ENST00000344626 RCAN1P53805 252 aa18.09■□□□□ 0.49
SMARCA4-201ENST00000344626 MTUS1Q9ULD2 1270 aa18.09■□□□□ 0.49
SMARCA4-201ENST00000344626 ABCB11O95342 1321 aa18.09■□□□□ 0.49
SMARCA4-201ENST00000344626 SLC9C1Q4G0N8 1177 aa18.09■□□□□ 0.49
SMARCA4-201ENST00000344626 NFE2L3Q9Y4A8 694 aa18.09■□□□□ 0.49
SMARCA4-201ENST00000344626 PPP6R2O75170 966 aa18.08■□□□□ 0.49
SMARCA4-201ENST00000344626 KRT9P35527 623 aa18.08■□□□□ 0.49
SMARCA4-201ENST00000344626 CYP2J2P51589 502 aa18.08■□□□□ 0.49
SMARCA4-201ENST00000344626 ZNF512BQ96KM6 892 aaPredicted RBP18.08■□□□□ 0.49
SMARCA4-201ENST00000344626 CTAGE15A4D2H0 777 aa18.08■□□□□ 0.49
SMARCA4-201ENST00000344626 CTAGE8P0CG41 777 aa18.08■□□□□ 0.49
SMARCA4-201ENST00000344626 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.08■□□□□ 0.49
SMARCA4-201ENST00000344626 CTAGE6Q86UF2 777 aa18.08■□□□□ 0.49
SMARCA4-201ENST00000344626 CTAGE4Q8IX94 777 aa18.08■□□□□ 0.49
SMARCA4-201ENST00000344626 TEX13BQ9BXU2 312 aa18.08■□□□□ 0.49
SMARCA4-201ENST00000344626 METTL14Q9HCE5 456 aaKnown RBP18.08■□□□□ 0.49
SMARCA4-201ENST00000344626 GSG1L2A8MUP6 293 aa18.08■□□□□ 0.48
SMARCA4-201ENST00000344626 GTF2A2P52657 109 aa18.08■□□□□ 0.48
SMARCA4-201ENST00000344626 TXNRD3Q86VQ6 643 aa18.08■□□□□ 0.48
SMARCA4-201ENST00000344626 MROH2AA6NES4 1674 aa18.08■□□□□ 0.48
SMARCA4-201ENST00000344626 PPP1R18Q6NYC8 613 aa18.08■□□□□ 0.48
SMARCA4-201ENST00000344626 ARMCX5Q6P1M9 558 aa18.08■□□□□ 0.48
SMARCA4-201ENST00000344626 C7orf31Q8N865 590 aa18.08■□□□□ 0.48
SMARCA4-201ENST00000344626 MMS19Q96T76 1030 aa18.08■□□□□ 0.48
SMARCA4-201ENST00000344626 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.08■□□□□ 0.48
SMARCA4-201ENST00000344626 C3P01024 1663 aa18.08■□□□□ 0.48
SMARCA4-201ENST00000344626 TRPA1O75762 1119 aa18.08■□□□□ 0.48
SMARCA4-201ENST00000344626 FAM26FQ5R3K3 315 aa18.08■□□□□ 0.48
SMARCA4-201ENST00000344626 SEL1L2Q5TEA6 688 aa18.08■□□□□ 0.48
SMARCA4-201ENST00000344626 GOLGA6L7A0A1B0GV03 622 aa18.07■□□□□ 0.48
SMARCA4-201ENST00000344626 FANCCQ00597 558 aa18.07■□□□□ 0.48
SMARCA4-201ENST00000344626 NBPF12Q5TAG4 269 aaPredicted RBP18.07■□□□□ 0.48
SMARCA4-201ENST00000344626 USP17L6PQ6QN14 398 aa18.07■□□□□ 0.48
SMARCA4-201ENST00000344626 SMC1BQ8NDV3 1235 aa18.07■□□□□ 0.48
SMARCA4-201ENST00000344626 SYMPKQ92797 1274 aaKnown RBP18.07■□□□□ 0.48
SMARCA4-201ENST00000344626 BAG1Q99933 345 aaPredicted RBP18.07■□□□□ 0.48
SMARCA4-201ENST00000344626 IFRD2Q12894 506 aaPredicted RBP18.07■□□□□ 0.48
SMARCA4-201ENST00000344626 ODR4Q5SWX8 454 aa18.07■□□□□ 0.48
SMARCA4-201ENST00000344626 NLRP4Q96MN2 994 aa18.07■□□□□ 0.48
SMARCA4-201ENST00000344626 SRRTQ9BXP5 876 aaKnown RBP18.07■□□□□ 0.48
SMARCA4-201ENST00000344626 GUCA1BQ9UMX6 200 aa18.07■□□□□ 0.48
SMARCA4-201ENST00000344626 KBTBD13C9JR72 458 aa18.07■□□□□ 0.48
SMARCA4-201ENST00000344626 GNAT1P11488 350 aa18.07■□□□□ 0.48
SMARCA4-201ENST00000344626 PNOCQ13519 176 aa18.07■□□□□ 0.48
SMARCA4-201ENST00000344626 C12orf60Q5U649 245 aa18.07■□□□□ 0.48
SMARCA4-201ENST00000344626 CYP26C1Q6V0L0 522 aa18.07■□□□□ 0.48
SMARCA4-201ENST00000344626 ANKRD13CQ8N6S4 541 aa18.07■□□□□ 0.48
SMARCA4-201ENST00000344626 TMTC3Q6ZXV5 915 aa18.07■□□□□ 0.48
SMARCA4-201ENST00000344626 ERO1BQ86YB8 467 aa18.07■□□□□ 0.48
SMARCA4-201ENST00000344626 GPRC5AQ8NFJ5 357 aa18.07■□□□□ 0.48
SMARCA4-201ENST00000344626 NEDD1Q8NHV4 660 aa18.07■□□□□ 0.48
SMARCA4-201ENST00000344626 LARP4BQ92615 738 aaKnown RBP18.07■□□□□ 0.48
SMARCA4-201ENST00000344626 SLC4A9Q96Q91 983 aa18.07■□□□□ 0.48
SMARCA4-201ENST00000344626 TMEM191BP0C7N4 346 aa18.06■□□□□ 0.48
SMARCA4-201ENST00000344626 SLC39A14Q15043 492 aa18.06■□□□□ 0.48
SMARCA4-201ENST00000344626 C3orf67Q6ZVT6 689 aa18.06■□□□□ 0.48
SMARCA4-201ENST00000344626 NUDT12Q9BQG2 462 aa18.06■□□□□ 0.48
SMARCA4-201ENST00000344626 KDM6AO15550 1401 aaPredicted RBP18.06■□□□□ 0.48
SMARCA4-201ENST00000344626 KIAA0754O94854 1291 aa18.06■□□□□ 0.48
SMARCA4-201ENST00000344626 MMP14P50281 582 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms