RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 PRDM1O75626 825 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 HSPA6P17066 643 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 ITIH3Q06033 890 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 NR5A1Q13285 461 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 SHC4Q6S5L8 630 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 HELBQ8NG08 1087 aaPredicted RBP5.23□□□□□ -1.57
CSMD3-203ENST00000343508 OSBP2Q969R2 916 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 LOC102724159A0A0B4J2E5 919 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 I3L4J1 428 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 PWP2Q15269 919 aaKnown RBP5.23□□□□□ -1.57
CSMD3-203ENST00000343508 LRRC24Q50LG9 513 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 SPATA4Q8NEY3 305 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 TRIM4Q9C037 500 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.23□□□□□ -1.57
CSMD3-203ENST00000343508 AFDNP55196 1824 aaKnown RBP5.23□□□□□ -1.57
CSMD3-203ENST00000343508 TRIM66O15016 1216 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 ADCY7P51828 1080 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 TC2NQ8N9U0 490 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 C3orf20Q8ND61 904 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 ATP6V1G3Q96LB4 118 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 SYNCQ9H7C4 482 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 ADGRB1O14514 1584 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 ANKRD65E5RJM6 399 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 SMTNP53814 917 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 PLCB4Q15147 1175 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 TMED8Q6PL24 325 aaPredicted RBP5.23□□□□□ -1.57
CSMD3-203ENST00000343508 SGMS1Q86VZ5 419 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 REXO1L1PQ8IX06 675 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 VTI1AQ96AJ9 217 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 SPDL1Q96EA4 605 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 CFAP57Q96MR6 1250 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 CAPN11Q9UMQ6 739 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 PDE6CP51160 858 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 IRX1P78414 480 aaPredicted RBP5.23□□□□□ -1.57
CSMD3-203ENST00000343508 EXOSC10Q01780 885 aaKnown RBP5.23□□□□□ -1.57
CSMD3-203ENST00000343508 ADAM9Q13443 819 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 TEX2Q8IWB9 1127 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 MTA3Q9BTC8 594 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 MAPK13O15264 365 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 ABCB4P21439 1286 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 PDCLQ13371 301 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 TMOD2Q9NZR1 351 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 THEGQ9P2T0 379 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 ANKRD35Q8N283 1001 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 ENGASEQ8NFI3 743 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 NEK9Q8TD19 979 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 ZMYND12Q9H0C1 365 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 HPCAL4Q9UM19 191 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 hCG_1984214I3L0E3 225 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 PSMD14O00487 310 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 SKIP12755 728 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 KRT5P13647 590 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 MDH1P40925 334 aaKnown RBP5.23□□□□□ -1.57
CSMD3-203ENST00000343508 PPP2R2AP63151 447 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 DR1Q01658 176 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 ZNF713Q8N859 430 aaPredicted RBP5.23□□□□□ -1.57
CSMD3-203ENST00000343508 SLC39A2Q9NP94 309 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 PCDHB6Q9Y5E3 794 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 SLIT1O75093 1534 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 FRMD3A2A2Y4 597 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 AP5Z1O43299 807 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 SRGAP2O75044 1071 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 PCCAP05165 728 aaPredicted RBP5.23□□□□□ -1.57
CSMD3-203ENST00000343508 TCIRG1Q13488 830 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 SDCCAG8Q86SQ7 713 aaPredicted RBP5.23□□□□□ -1.57
CSMD3-203ENST00000343508 PTPN22Q9Y2R2 807 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 COL4A3BPQ9Y5P4 624 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 CCNE1P24864 410 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 SUGP1Q8IWZ8 645 aaKnown RBP5.23□□□□□ -1.57
CSMD3-203ENST00000343508 SDR42E1Q8WUS8 393 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 TSC22D3Q99576 134 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 DPH5Q9H2P9 285 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 CEP72Q9P209 647 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 PLAAQ9Y263 795 aa5.23□□□□□ -1.57
CSMD3-203ENST00000343508 E2F5Q15329 346 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 WDR44Q5JSH3 913 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 TEX11Q8IYF3 940 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 SMC1BQ8NDV3 1235 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 STK17AQ9UEE5 414 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 SUFUQ9UMX1 484 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 KCNQ3O43525 872 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 TNNI2P48788 182 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 HINFPQ9BQA5 517 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 A1BGP04217 495 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 RASIP1Q5U651 963 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 FBXO41Q8TF61 875 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 KCNB2Q92953 911 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 RILPQ96NA2 401 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 PCDHB13Q9Y5F0 798 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 N4BP1O75113 896 aaKnown RBP5.22□□□□□ -1.57
CSMD3-203ENST00000343508 HIBADHP31937 336 aaKnown RBP5.22□□□□□ -1.57
CSMD3-203ENST00000343508 FAM133BQ5BKY9 247 aaKnown RBP5.22□□□□□ -1.57
CSMD3-203ENST00000343508 MYCT1Q8N699 235 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 GRAMD1AQ96CP6 724 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 SYNGAP1Q96PV0 1343 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 GCFC2P16383 781 aaKnown RBP5.22□□□□□ -1.57
CSMD3-203ENST00000343508 ADCY8P40145 1251 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 STRN3Q13033 797 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 METTL16Q86W50 562 aaKnown RBP5.22□□□□□ -1.57
CSMD3-203ENST00000343508 IWS1Q96ST2 819 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms