RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 EPSTI1Q96J88 318 aa20.41■□□□□ 0.86
SMPD1-201ENST00000342245 NOX5Q96PH1 765 aa20.41■□□□□ 0.86
SMPD1-201ENST00000342245 LRRD1A4D1F6 860 aa20.4■□□□□ 0.86
SMPD1-201ENST00000342245 PPFIA2O75334 1257 aa20.4■□□□□ 0.86
SMPD1-201ENST00000342245 FLOT1O75955 427 aa20.4■□□□□ 0.86
SMPD1-201ENST00000342245 DEXIO95424 95 aa20.4■□□□□ 0.86
SMPD1-201ENST00000342245 TMOD1P28289 359 aa20.4■□□□□ 0.86
SMPD1-201ENST00000342245 CNGA1P29973 690 aa20.4■□□□□ 0.86
SMPD1-201ENST00000342245 ZNF131P52739 623 aa20.4■□□□□ 0.86
SMPD1-201ENST00000342245 CTDSPL2Q05D32 466 aa20.4■□□□□ 0.86
SMPD1-201ENST00000342245 FAM129AQ9BZQ8 928 aa20.4■□□□□ 0.86
SMPD1-201ENST00000342245 FAM217BQ9NTX9 383 aaPredicted RBP20.4■□□□□ 0.86
SMPD1-201ENST00000342245 NFAT5O94916 1531 aa20.4■□□□□ 0.86
SMPD1-201ENST00000342245 F8W031 263 aaPredicted RBP20.39■□□□□ 0.86
SMPD1-201ENST00000342245 NPTXRO95502 500 aa20.39■□□□□ 0.86
SMPD1-201ENST00000342245 VIMP08670 466 aaKnown RBP20.39■□□□□ 0.86
SMPD1-201ENST00000342245 CSB-PGBD3P0DP91 1061 aa20.39■□□□□ 0.86
SMPD1-201ENST00000342245 MRPS35P82673 323 aaKnown RBP20.39■□□□□ 0.86
SMPD1-201ENST00000342245 DTNBP1Q96EV8 351 aa20.39■□□□□ 0.86
SMPD1-201ENST00000342245 TLR10Q9BXR5 811 aa20.39■□□□□ 0.86
SMPD1-201ENST00000342245 AGPAT5Q9NUQ2 364 aa20.39■□□□□ 0.86
SMPD1-201ENST00000342245 SMIM24O75264 130 aa20.39■□□□□ 0.85
SMPD1-201ENST00000342245 SETSIPP0DME0 302 aa20.39■□□□□ 0.85
SMPD1-201ENST00000342245 MYBP10242 640 aa20.39■□□□□ 0.85
SMPD1-201ENST00000342245 AIMP1Q12904 312 aaKnown RBP20.39■□□□□ 0.85
SMPD1-201ENST00000342245 CMPK2Q5EBM0 449 aa20.39■□□□□ 0.85
SMPD1-201ENST00000342245 GIGYF2Q6Y7W6 1299 aaKnown RBP20.39■□□□□ 0.85
SMPD1-201ENST00000342245 TBC1D1Q86TI0 1168 aaPredicted RBP20.39■□□□□ 0.85
SMPD1-201ENST00000342245 GBP7Q8N8V2 638 aaPredicted RBP20.39■□□□□ 0.85
SMPD1-201ENST00000342245 XPO6Q96QU8 1125 aaKnown RBP20.39■□□□□ 0.85
SMPD1-201ENST00000342245 OSBPL1AQ9BXW6 950 aa20.39■□□□□ 0.85
SMPD1-201ENST00000342245 MLXIPQ9HAP2 919 aa20.39■□□□□ 0.85
SMPD1-201ENST00000342245 PANK4Q9NVE7 773 aa20.39■□□□□ 0.85
SMPD1-201ENST00000342245 VPS54Q9P1Q0 977 aa20.39■□□□□ 0.85
SMPD1-201ENST00000342245 PHF20L1A8MW92 1017 aa20.38■□□□□ 0.85
SMPD1-201ENST00000342245 ATP2A2P16615 1042 aaKnown RBP20.38■□□□□ 0.85
SMPD1-201ENST00000342245 CASP1P29466 404 aa20.38■□□□□ 0.85
SMPD1-201ENST00000342245 IL15P40933 162 aaPredicted RBP20.38■□□□□ 0.85
SMPD1-201ENST00000342245 CTCFP49711 727 aaPredicted RBP20.38■□□□□ 0.85
SMPD1-201ENST00000342245 PIGWQ7Z7B1 504 aa20.38■□□□□ 0.85
SMPD1-201ENST00000342245 TRIM74Q86UV6 250 aa20.38■□□□□ 0.85
SMPD1-201ENST00000342245 TRIM73Q86UV7 250 aa20.38■□□□□ 0.85
SMPD1-201ENST00000342245 SAMD15Q9P1V8 674 aa20.38■□□□□ 0.85
SMPD1-201ENST00000342245 SLC12A7Q9Y666 1083 aa20.38■□□□□ 0.85
SMPD1-201ENST00000342245 AFF2P51816 1311 aa20.38■□□□□ 0.85
SMPD1-201ENST00000342245 MYH13Q9UKX3 1938 aa20.38■□□□□ 0.85
SMPD1-201ENST00000342245 USP54Q70EL1 1684 aa20.38■□□□□ 0.85
SMPD1-201ENST00000342245 FER1L4A9Z1Z3 1794 aa20.38■□□□□ 0.85
SMPD1-201ENST00000342245 SPDYE3A6NKU9 549 aa20.38■□□□□ 0.85
SMPD1-201ENST00000342245 WFS1O76024 890 aa20.38■□□□□ 0.85
SMPD1-201ENST00000342245 GNAT1P11488 350 aa20.38■□□□□ 0.85
SMPD1-201ENST00000342245 CXCR5P32302 372 aa20.38■□□□□ 0.85
SMPD1-201ENST00000342245 LBRQ14739 615 aaKnown RBP20.38■□□□□ 0.85
SMPD1-201ENST00000342245 TRPM8Q7Z2W7 1104 aa20.38■□□□□ 0.85
SMPD1-201ENST00000342245 FAM114A1Q8IWE2 563 aa20.38■□□□□ 0.85
SMPD1-201ENST00000342245 NSRP1Q9H0G5 558 aaKnown RBP20.38■□□□□ 0.85
SMPD1-201ENST00000342245 XDHP47989 1333 aa20.38■□□□□ 0.85
SMPD1-201ENST00000342245 ZNF263O14978 683 aa20.37■□□□□ 0.85
SMPD1-201ENST00000342245 MAGEA8P43361 318 aa20.37■□□□□ 0.85
SMPD1-201ENST00000342245 SPDYCQ5MJ68 293 aa20.37■□□□□ 0.85
SMPD1-201ENST00000342245 CYB5R4Q7L1T6 521 aa20.37■□□□□ 0.85
SMPD1-201ENST00000342245 SPATA21Q7Z572 469 aa20.37■□□□□ 0.85
SMPD1-201ENST00000342245 IGDCC4Q8TDY8 1250 aa20.37■□□□□ 0.85
SMPD1-201ENST00000342245 IFT74Q96LB3 600 aa20.37■□□□□ 0.85
SMPD1-201ENST00000342245 MYD88Q99836 296 aa20.37■□□□□ 0.85
SMPD1-201ENST00000342245 PLAGL2Q9UPG8 496 aa20.37■□□□□ 0.85
SMPD1-201ENST00000342245 PHF8Q9UPP1 1060 aa20.37■□□□□ 0.85
SMPD1-201ENST00000342245 ESYT3A0FGR9 886 aa20.37■□□□□ 0.85
SMPD1-201ENST00000342245 RXRAP19793 462 aa20.37■□□□□ 0.85
SMPD1-201ENST00000342245 EIF3BP55884 814 aaKnown RBP20.37■□□□□ 0.85
SMPD1-201ENST00000342245 ANKRD20A2Q5SQ80 823 aa20.37■□□□□ 0.85
SMPD1-201ENST00000342245 FKBP15Q5T1M5 1219 aa20.37■□□□□ 0.85
SMPD1-201ENST00000342245 ANKRD20A1Q5TYW2 823 aa20.37■□□□□ 0.85
SMPD1-201ENST00000342245 ANKRD20A3Q5VUR7 823 aa20.37■□□□□ 0.85
SMPD1-201ENST00000342245 LMNTD2Q8IXW0 634 aa20.37■□□□□ 0.85
SMPD1-201ENST00000342245 ADSSL1Q8N142 457 aa20.37■□□□□ 0.85
SMPD1-201ENST00000342245 B4GALNT2Q8NHY0 566 aa20.37■□□□□ 0.85
SMPD1-201ENST00000342245 LY9Q9HBG7 655 aa20.37■□□□□ 0.85
SMPD1-201ENST00000342245 PDLIM1O00151 329 aa20.36■□□□□ 0.85
SMPD1-201ENST00000342245 CES2O00748 559 aa20.36■□□□□ 0.85
SMPD1-201ENST00000342245 RPN1P04843 607 aaKnown RBP20.36■□□□□ 0.85
SMPD1-201ENST00000342245 IMPDH2P12268 514 aa20.36■□□□□ 0.85
SMPD1-201ENST00000342245 ATP11AP98196 1134 aa20.36■□□□□ 0.85
SMPD1-201ENST00000342245 ARHGAP22Q7Z5H3 698 aa20.36■□□□□ 0.85
SMPD1-201ENST00000342245 BICD1Q96G01 975 aa20.36■□□□□ 0.85
SMPD1-201ENST00000342245 CABP5Q9NP86 173 aa20.36■□□□□ 0.85
SMPD1-201ENST00000342245 CNOT8Q9UFF9 292 aaKnown RBP20.36■□□□□ 0.85
SMPD1-201ENST00000342245 TAOK2Q9UL54 1235 aa20.36■□□□□ 0.85
SMPD1-201ENST00000342245 NOVA2Q9UNW9 492 aaKnown RBP20.36■□□□□ 0.85
SMPD1-201ENST00000342245 KCNJ14Q9UNX9 436 aa20.36■□□□□ 0.85
SMPD1-201ENST00000342245 E7ENQ6 273 aa20.36■□□□□ 0.85
SMPD1-201ENST00000342245 PRCPP42785 496 aa20.36■□□□□ 0.85
SMPD1-201ENST00000342245 KIF11P52732 1056 aa20.36■□□□□ 0.85
SMPD1-201ENST00000342245 LACTBP83111 547 aaPredicted RBP20.36■□□□□ 0.85
SMPD1-201ENST00000342245 SGSM1Q2NKQ1 1148 aa20.36■□□□□ 0.85
SMPD1-201ENST00000342245 KLHDC7AQ5VTJ3 777 aa20.36■□□□□ 0.85
SMPD1-201ENST00000342245 NAF1Q96HR8 494 aaKnown RBP20.36■□□□□ 0.85
SMPD1-201ENST00000342245 ERGIC2Q96RQ1 377 aa20.36■□□□□ 0.85
SMPD1-201ENST00000342245 KRT12Q99456 494 aa20.36■□□□□ 0.85
SMPD1-201ENST00000342245 SMARCAL1Q9NZC9 954 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms