RNA–Protein interactions for RNA: ENST00000341871.7

TMEM220-201, Transcript of transmembrane protein 220, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM220, Length 3,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-201ENST00000341871 SEC63Q9UGP8 760 aaKnown RBP13.49□□□□□ -0.25
TMEM220-201ENST00000341871 DACH1Q9UI36 760 aa13.49□□□□□ -0.25
TMEM220-201ENST00000341871 MAD2L2Q9UI95 211 aa13.49□□□□□ -0.25
TMEM220-201ENST00000341871 SCAF8Q9UPN6 1271 aaKnown RBP13.49□□□□□ -0.25
TMEM220-201ENST00000341871 MYH13Q9UKX3 1938 aa13.48□□□□□ -0.25
TMEM220-201ENST00000341871 MAP2K7O14733 419 aa13.48□□□□□ -0.25
TMEM220-201ENST00000341871 POLD1P28340 1107 aa13.48□□□□□ -0.25
TMEM220-201ENST00000341871 IKQ13123 557 aaPredicted RBP13.48□□□□□ -0.25
TMEM220-201ENST00000341871 KCTD1Q719H9 257 aa13.48□□□□□ -0.25
TMEM220-201ENST00000341871 C3orf20Q8ND61 904 aa13.48□□□□□ -0.25
TMEM220-201ENST00000341871 WDR24Q96S15 920 aa13.48□□□□□ -0.25
TMEM220-201ENST00000341871 GBP3Q9H0R5 595 aa13.48□□□□□ -0.25
TMEM220-201ENST00000341871 ZSCAN12O43309 604 aa13.48□□□□□ -0.25
TMEM220-201ENST00000341871 PARP1P09874 1014 aaKnown RBP13.48□□□□□ -0.25
TMEM220-201ENST00000341871 SETSIPP0DME0 302 aa13.48□□□□□ -0.25
TMEM220-201ENST00000341871 IDEP14735 1019 aa13.48□□□□□ -0.25
TMEM220-201ENST00000341871 DDR1Q08345 913 aa13.48□□□□□ -0.25
TMEM220-201ENST00000341871 UBE2SQ16763 222 aa13.48□□□□□ -0.25
TMEM220-201ENST00000341871 NELFBQ8WX92 580 aa13.48□□□□□ -0.25
TMEM220-201ENST00000341871 ORC4O43929 436 aa13.48□□□□□ -0.25
TMEM220-201ENST00000341871 ATP2C2O75185 946 aa13.48□□□□□ -0.25
TMEM220-201ENST00000341871 BEND6Q5SZJ8 279 aaPredicted RBP13.48□□□□□ -0.25
TMEM220-201ENST00000341871 TTBK2Q6IQ55 1244 aa13.48□□□□□ -0.25
TMEM220-201ENST00000341871 TBC1D31Q96DN5 1066 aa13.48□□□□□ -0.25
TMEM220-201ENST00000341871 ZC3H12CQ9C0D7 883 aaKnown RBP13.48□□□□□ -0.25
TMEM220-201ENST00000341871 PPP2R2CQ9Y2T4 447 aa13.48□□□□□ -0.25
TMEM220-201ENST00000341871 GRIK3Q13003 919 aa13.47□□□□□ -0.25
TMEM220-201ENST00000341871 ACRBPQ8NEB7 543 aa13.47□□□□□ -0.25
TMEM220-201ENST00000341871 TBC1D16Q8TBP0 767 aa13.47□□□□□ -0.25
TMEM220-201ENST00000341871 HINFPQ9BQA5 517 aa13.47□□□□□ -0.25
TMEM220-201ENST00000341871 ZHX3Q9H4I2 956 aa13.47□□□□□ -0.25
TMEM220-201ENST00000341871 CHCHD3Q9NX63 227 aaKnown RBP13.47□□□□□ -0.25
TMEM220-201ENST00000341871 FLT1P17948 1338 aa13.47□□□□□ -0.25
TMEM220-201ENST00000341871 SEMA3EO15041 775 aa13.47□□□□□ -0.25
TMEM220-201ENST00000341871 ZEB2O60315 1214 aa13.47□□□□□ -0.25
TMEM220-201ENST00000341871 ATP2C1P98194 919 aaPredicted RBP13.47□□□□□ -0.25
TMEM220-201ENST00000341871 TRMT1LQ7Z2T5 733 aaKnown RBP13.47□□□□□ -0.25
TMEM220-201ENST00000341871 FAM76AQ8TAV0 307 aa13.47□□□□□ -0.25
TMEM220-201ENST00000341871 RTFDC1Q9BY42 306 aaPredicted RBP13.47□□□□□ -0.25
TMEM220-201ENST00000341871 PCDHA6Q9UN73 950 aa13.47□□□□□ -0.25
TMEM220-201ENST00000341871 PCDHA4Q9UN74 947 aa13.47□□□□□ -0.25
TMEM220-201ENST00000341871 PCDHA8Q9Y5H6 950 aa13.47□□□□□ -0.25
TMEM220-201ENST00000341871 PHLPP1O60346 1717 aa13.47□□□□□ -0.25
TMEM220-201ENST00000341871 ABL1P00519 1130 aa13.46□□□□□ -0.25
TMEM220-201ENST00000341871 LDHCP07864 332 aa13.46□□□□□ -0.25
TMEM220-201ENST00000341871 MYBL1P10243 752 aa13.46□□□□□ -0.25
TMEM220-201ENST00000341871 AKR1B1P15121 316 aa13.46□□□□□ -0.25
TMEM220-201ENST00000341871 CDC25CP30307 473 aa13.46□□□□□ -0.25
TMEM220-201ENST00000341871 CACNB1Q02641 598 aaPredicted RBP13.46□□□□□ -0.25
TMEM220-201ENST00000341871 KANK3Q6NY19 840 aa13.46□□□□□ -0.25
TMEM220-201ENST00000341871 TC2NQ8N9U0 490 aa13.46□□□□□ -0.25
TMEM220-201ENST00000341871 FERMT2Q96AC1 680 aa13.46□□□□□ -0.25
TMEM220-201ENST00000341871 TRIM47Q96LD4 638 aa13.46□□□□□ -0.25
TMEM220-201ENST00000341871 CCDC114Q96M63 670 aa13.46□□□□□ -0.25
TMEM220-201ENST00000341871 RMI1Q9H9A7 625 aa13.46□□□□□ -0.25
TMEM220-201ENST00000341871 FANCGO15287 622 aa13.46□□□□□ -0.25
TMEM220-201ENST00000341871 PDHBP11177 359 aa13.46□□□□□ -0.25
TMEM220-201ENST00000341871 PECAM1P16284 738 aaPredicted RBP13.46□□□□□ -0.25
TMEM220-201ENST00000341871 ABCD1P33897 745 aa13.46□□□□□ -0.25
TMEM220-201ENST00000341871 PRCPP42785 496 aa13.46□□□□□ -0.25
TMEM220-201ENST00000341871 PMS1P54277 932 aaKnown RBP13.46□□□□□ -0.25
TMEM220-201ENST00000341871 GNGT1P63211 74 aa13.46□□□□□ -0.25
TMEM220-201ENST00000341871 ASIC1P78348 528 aa13.46□□□□□ -0.25
TMEM220-201ENST00000341871 GSTO1P78417 241 aa13.46□□□□□ -0.25
TMEM220-201ENST00000341871 PPARDQ03181 441 aa13.46□□□□□ -0.25
TMEM220-201ENST00000341871 UBXN1Q04323 297 aa13.46□□□□□ -0.25
TMEM220-201ENST00000341871 FILIP1LQ4L180 1135 aa13.46□□□□□ -0.25
TMEM220-201ENST00000341871 ENOX1Q8TC92 643 aaKnown RBP13.46□□□□□ -0.25
TMEM220-201ENST00000341871 TBCKQ8TEA7 893 aa13.46□□□□□ -0.25
TMEM220-201ENST00000341871 RBM17Q96I25 401 aaKnown RBP13.46□□□□□ -0.25
TMEM220-201ENST00000341871 TBC1D7Q9P0N9 293 aa13.46□□□□□ -0.25
TMEM220-201ENST00000341871 LEMD3Q9Y2U8 911 aa13.46□□□□□ -0.25
TMEM220-201ENST00000341871 C4AP0C0L4 1744 aa13.46□□□□□ -0.25
TMEM220-201ENST00000341871 C4BP0C0L5 1744 aa13.46□□□□□ -0.25
TMEM220-201ENST00000341871 RPN1P04843 607 aaKnown RBP13.46□□□□□ -0.26
TMEM220-201ENST00000341871 NFIAQ12857 509 aa13.46□□□□□ -0.26
TMEM220-201ENST00000341871 ENOX2Q16206 610 aaKnown RBP13.46□□□□□ -0.26
TMEM220-201ENST00000341871 HHATQ5VTY9 493 aa13.46□□□□□ -0.26
TMEM220-201ENST00000341871 USP40Q9NVE5 1235 aa13.46□□□□□ -0.26
TMEM220-201ENST00000341871 ANKRD33BA6NCL7 494 aa13.45□□□□□ -0.26
TMEM220-201ENST00000341871 EIF4E1BA6NMX2 242 aaKnown RBP13.45□□□□□ -0.26
TMEM220-201ENST00000341871 SARSP49591 514 aaKnown RBP13.45□□□□□ -0.26
TMEM220-201ENST00000341871 FXR1P51114 621 aaKnown RBP eCLIP13.45□□□□□ -0.26
TMEM220-201ENST00000341871 SNCBQ16143 134 aa13.45□□□□□ -0.26
TMEM220-201ENST00000341871 PDCD2Q16342 344 aaPredicted RBP13.45□□□□□ -0.26
TMEM220-201ENST00000341871 TXNRD1Q16881 649 aa13.45□□□□□ -0.26
TMEM220-201ENST00000341871 RC3H1Q5TC82 1133 aaKnown RBP13.45□□□□□ -0.26
TMEM220-201ENST00000341871 TNFRSF25Q93038 417 aa13.45□□□□□ -0.26
TMEM220-201ENST00000341871 KDM4CQ9H3R0 1056 aa13.45□□□□□ -0.26
TMEM220-201ENST00000341871 MRPL44Q9H9J2 332 aaKnown RBP13.45□□□□□ -0.26
TMEM220-201ENST00000341871 A1CFQ9NQ94 594 aaKnown RBP13.45□□□□□ -0.26
TMEM220-201ENST00000341871 DDX4Q9NQI0 724 aaKnown RBP13.45□□□□□ -0.26
TMEM220-201ENST00000341871 DDX20Q9UHI6 824 aaKnown RBP13.45□□□□□ -0.26
TMEM220-201ENST00000341871 POTEMA6NI47 508 aa13.45□□□□□ -0.26
TMEM220-201ENST00000341871 TMCO5BA8MYB1 307 aa13.45□□□□□ -0.26
TMEM220-201ENST00000341871 PPP1R3GB7ZBB8 358 aa13.45□□□□□ -0.26
TMEM220-201ENST00000341871 AKR1B15C9JRZ8 316 aaPredicted RBP13.45□□□□□ -0.26
TMEM220-201ENST00000341871 RNF225M0QZC1 329 aaPredicted RBP13.45□□□□□ -0.26
TMEM220-201ENST00000341871 TPD52L2O43399 206 aaKnown RBP13.45□□□□□ -0.26
TMEM220-201ENST00000341871 FCER1AP12319 257 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms