RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 TSHZ3Q63HK5 1081 aa19.42■□□□□ 0.7
NECTIN1-202ENST00000340882 DHX38Q92620 1227 aaKnown RBP19.42■□□□□ 0.7
NECTIN1-202ENST00000340882 ANKS1AQ92625 1134 aa19.42■□□□□ 0.7
NECTIN1-202ENST00000340882 SEC62Q99442 399 aaKnown RBP19.42■□□□□ 0.7
NECTIN1-202ENST00000340882 ZBED2Q9BTP6 218 aa19.42■□□□□ 0.7
NECTIN1-202ENST00000340882 ZNF287Q9HBT7 754 aa19.42■□□□□ 0.7
NECTIN1-202ENST00000340882 ZNF318Q5VUA4 2279 aa19.42■□□□□ 0.7
NECTIN1-202ENST00000340882 PATL2C9JE40 543 aaKnown RBP19.41■□□□□ 0.7
NECTIN1-202ENST00000340882 CCER2I3L3R5 266 aa19.41■□□□□ 0.7
NECTIN1-202ENST00000340882 SSTR3P32745 418 aaPredicted RBP19.41■□□□□ 0.7
NECTIN1-202ENST00000340882 SLC16A2P36021 539 aa19.41■□□□□ 0.7
NECTIN1-202ENST00000340882 NHLH1Q02575 133 aa19.41■□□□□ 0.7
NECTIN1-202ENST00000340882 PTPN11Q06124 597 aaPredicted RBP19.41■□□□□ 0.7
NECTIN1-202ENST00000340882 PTGISQ16647 500 aa19.41■□□□□ 0.7
NECTIN1-202ENST00000340882 GDF6Q6KF10 455 aaPredicted RBP19.41■□□□□ 0.7
NECTIN1-202ENST00000340882 RANBP17Q9H2T7 1088 aaKnown RBP19.41■□□□□ 0.7
NECTIN1-202ENST00000340882 ADD3Q9UEY8 706 aaKnown RBP19.41■□□□□ 0.7
NECTIN1-202ENST00000340882 STX8Q9UNK0 236 aa19.41■□□□□ 0.7
NECTIN1-202ENST00000340882 ATG2AQ2TAZ0 1938 aa19.41■□□□□ 0.7
NECTIN1-202ENST00000340882 PTPDC1A2A3K4 754 aa19.4■□□□□ 0.7
NECTIN1-202ENST00000340882 NBNO60934 754 aa19.4■□□□□ 0.7
NECTIN1-202ENST00000340882 ARIH2O95376 493 aa19.4■□□□□ 0.7
NECTIN1-202ENST00000340882 GJB5O95377 273 aa19.4■□□□□ 0.7
NECTIN1-202ENST00000340882 PTCRAQ6ISU1 281 aaPredicted RBP19.4■□□□□ 0.7
NECTIN1-202ENST00000340882 FAM117BQ6P1L5 589 aa19.4■□□□□ 0.7
NECTIN1-202ENST00000340882 CLEC4DQ8WXI8 215 aa19.4■□□□□ 0.7
NECTIN1-202ENST00000340882 FBXL18Q96ME1 805 aa19.4■□□□□ 0.7
NECTIN1-202ENST00000340882 TGS1Q96RS0 853 aaKnown RBP19.4■□□□□ 0.7
NECTIN1-202ENST00000340882 NOD1Q9Y239 953 aa19.4■□□□□ 0.7
NECTIN1-202ENST00000340882 MICAL3Q7RTP6 2002 aa19.39■□□□□ 0.69
NECTIN1-202ENST00000340882 GRXCR2A6NFK2 248 aa19.39■□□□□ 0.69
NECTIN1-202ENST00000340882 GNAT2P19087 354 aa19.39■□□□□ 0.69
NECTIN1-202ENST00000340882 CALML3P27482 149 aa19.39■□□□□ 0.69
NECTIN1-202ENST00000340882 PDE4BQ07343 736 aa19.39■□□□□ 0.69
NECTIN1-202ENST00000340882 PPARAQ07869 468 aa19.39■□□□□ 0.69
NECTIN1-202ENST00000340882 PPP2R5BQ15173 497 aa19.39■□□□□ 0.69
NECTIN1-202ENST00000340882 LRRFIP1Q32MZ4 808 aaKnown RBP19.39■□□□□ 0.69
NECTIN1-202ENST00000340882 AFAP1L1Q8TED9 768 aa19.39■□□□□ 0.69
NECTIN1-202ENST00000340882 RAD9AQ99638 391 aa19.39■□□□□ 0.69
NECTIN1-202ENST00000340882 C17orf80Q9BSJ5 609 aa19.39■□□□□ 0.69
NECTIN1-202ENST00000340882 ECHDC1Q9NTX5 307 aa19.39■□□□□ 0.69
NECTIN1-202ENST00000340882 KIAA1217Q5T5P2 1943 aa19.39■□□□□ 0.69
NECTIN1-202ENST00000340882 MYH7BA7E2Y1 1941 aa19.38■□□□□ 0.69
NECTIN1-202ENST00000340882 CXCL10P02778 98 aa19.38■□□□□ 0.69
NECTIN1-202ENST00000340882 EDNRBP24530 442 aa19.38■□□□□ 0.69
NECTIN1-202ENST00000340882 MYO7AQ13402 2215 aa19.38■□□□□ 0.69
NECTIN1-202ENST00000340882 CNKSR3Q6P9H4 555 aa19.38■□□□□ 0.69
NECTIN1-202ENST00000340882 LRRC8DQ7L1W4 858 aa19.38■□□□□ 0.69
NECTIN1-202ENST00000340882 LRRCC1Q9C099 1032 aa19.38■□□□□ 0.69
NECTIN1-202ENST00000340882 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.38■□□□□ 0.69
NECTIN1-202ENST00000340882 NLRC5Q86WI3 1866 aa19.37■□□□□ 0.69
NECTIN1-202ENST00000340882 H3BQ06 376 aaPredicted RBP19.37■□□□□ 0.69
NECTIN1-202ENST00000340882 NKRFO15226 690 aaKnown RBP eCLIP19.37■□□□□ 0.69
NECTIN1-202ENST00000340882 KPNA6O60684 536 aa19.37■□□□□ 0.69
NECTIN1-202ENST00000340882 TXNP10599 105 aaKnown RBP19.37■□□□□ 0.69
NECTIN1-202ENST00000340882 SELPP16109 830 aa19.37■□□□□ 0.69
NECTIN1-202ENST00000340882 CTDSPL2Q05D32 466 aa19.37■□□□□ 0.69
NECTIN1-202ENST00000340882 PDE4DQ08499 809 aa19.37■□□□□ 0.69
NECTIN1-202ENST00000340882 CCDC96Q2M329 555 aa19.37■□□□□ 0.69
NECTIN1-202ENST00000340882 BRDTQ58F21 947 aaPredicted RBP19.37■□□□□ 0.69
NECTIN1-202ENST00000340882 CAGE1Q8TC20 777 aa19.37■□□□□ 0.69
NECTIN1-202ENST00000340882 SCFD2Q8WU76 684 aa19.37■□□□□ 0.69
NECTIN1-202ENST00000340882 KAT2BQ92831 832 aa19.37■□□□□ 0.69
NECTIN1-202ENST00000340882 RAD50Q92878 1312 aa19.36■□□□□ 0.69
NECTIN1-202ENST00000340882 LOC102724159A0A0B4J2E5 919 aa19.36■□□□□ 0.69
NECTIN1-202ENST00000340882 POTEB3A0JP26 581 aa19.36■□□□□ 0.69
NECTIN1-202ENST00000340882 FOXP2O15409 715 aa19.36■□□□□ 0.69
NECTIN1-202ENST00000340882 CKBP12277 381 aa19.36■□□□□ 0.69
NECTIN1-202ENST00000340882 ALADP13716 330 aa19.36■□□□□ 0.69
NECTIN1-202ENST00000340882 PWP2Q15269 919 aaKnown RBP19.36■□□□□ 0.69
NECTIN1-202ENST00000340882 TRAF7Q6Q0C0 670 aa19.36■□□□□ 0.69
NECTIN1-202ENST00000340882 POTEBQ6S5H4 581 aa19.36■□□□□ 0.69
NECTIN1-202ENST00000340882 BTNL9Q6UXG8 535 aa19.36■□□□□ 0.69
NECTIN1-202ENST00000340882 NEK9Q8TD19 979 aa19.36■□□□□ 0.69
NECTIN1-202ENST00000340882 AFG1LQ8WV93 481 aa19.36■□□□□ 0.69
NECTIN1-202ENST00000340882 WNT8BQ93098 351 aa19.36■□□□□ 0.69
NECTIN1-202ENST00000340882 FRMPD2Q68DX3 1309 aaPredicted RBP19.35■□□□□ 0.69
NECTIN1-202ENST00000340882 NOVP48745 357 aa19.35■□□□□ 0.69
NECTIN1-202ENST00000340882 RPS6P62753 249 aaKnown RBP19.35■□□□□ 0.69
NECTIN1-202ENST00000340882 RBL2Q08999 1139 aa19.35■□□□□ 0.69
NECTIN1-202ENST00000340882 MBTPS1Q14703 1052 aa19.35■□□□□ 0.69
NECTIN1-202ENST00000340882 CSPP1Q1MSJ5 1256 aa19.35■□□□□ 0.69
NECTIN1-202ENST00000340882 SYDE2Q5VT97 1194 aa19.35■□□□□ 0.69
NECTIN1-202ENST00000340882 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.35■□□□□ 0.69
NECTIN1-202ENST00000340882 RNF207Q6ZRF8 634 aa19.35■□□□□ 0.69
NECTIN1-202ENST00000340882 SESTD1Q86VW0 696 aa19.35■□□□□ 0.69
NECTIN1-202ENST00000340882 NAPBQ9H115 298 aa19.35■□□□□ 0.69
NECTIN1-202ENST00000340882 ABHD14A-ACY1A0A1B0GW23 586 aa19.34■□□□□ 0.69
NECTIN1-202ENST00000340882 TSPY2A6NKD2 308 aa19.34■□□□□ 0.69
NECTIN1-202ENST00000340882 DCXO43602 365 aa19.34■□□□□ 0.69
NECTIN1-202ENST00000340882 MMP3P08254 477 aa19.34■□□□□ 0.69
NECTIN1-202ENST00000340882 CCDC62Q6P9F0 684 aa19.34■□□□□ 0.69
NECTIN1-202ENST00000340882 CCDC155Q8N6L0 562 aa19.34■□□□□ 0.69
NECTIN1-202ENST00000340882 FBXO22Q8NEZ5 403 aa19.34■□□□□ 0.69
NECTIN1-202ENST00000340882 DCAF4Q8WV16 495 aa19.34■□□□□ 0.69
NECTIN1-202ENST00000340882 SNX27Q96L92 541 aa19.34■□□□□ 0.69
NECTIN1-202ENST00000340882 PHOX2BQ99453 314 aa19.34■□□□□ 0.69
NECTIN1-202ENST00000340882 GPCPD1Q9NPB8 672 aa19.34■□□□□ 0.69
NECTIN1-202ENST00000340882 DDX19BQ9UMR2 479 aa19.34■□□□□ 0.69
NECTIN1-202ENST00000340882 ZFYP08048 801 aaPredicted RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms