RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 HERC5Q9UII4 1024 aaKnown RBP13.96□□□□□ -0.17
ATXN3-201ENST00000340660 CD207Q9UJ71 328 aa13.96□□□□□ -0.17
ATXN3-201ENST00000340660 ZBTB21Q9ULJ3 1066 aa13.96□□□□□ -0.17
ATXN3-201ENST00000340660 CNPY2Q9Y2B0 182 aa13.96□□□□□ -0.17
ATXN3-201ENST00000340660 MYH2Q9UKX2 1941 aa13.96□□□□□ -0.18
ATXN3-201ENST00000340660 KIF16BQ96L93 1317 aa13.95□□□□□ -0.18
ATXN3-201ENST00000340660 SIPA1L1O43166 1804 aa13.95□□□□□ -0.18
ATXN3-201ENST00000340660 BAIAP3O94812 1187 aa13.95□□□□□ -0.18
ATXN3-201ENST00000340660 CYP2C9P11712 490 aa13.95□□□□□ -0.18
ATXN3-201ENST00000340660 CTHP32929 405 aa13.95□□□□□ -0.18
ATXN3-201ENST00000340660 KCNJ6P48051 423 aa13.95□□□□□ -0.18
ATXN3-201ENST00000340660 ZNF792Q3KQV3 632 aa13.95□□□□□ -0.18
ATXN3-201ENST00000340660 NCAPG2Q86XI2 1143 aa13.95□□□□□ -0.18
ATXN3-201ENST00000340660 RAD9AQ99638 391 aa13.95□□□□□ -0.18
ATXN3-201ENST00000340660 MROH8Q9H579 483 aa13.95□□□□□ -0.18
ATXN3-201ENST00000340660 MAP10Q9P2G4 905 aa13.95□□□□□ -0.18
ATXN3-201ENST00000340660 HELZ2Q9BYK8 2649 aaKnown RBP13.95□□□□□ -0.18
ATXN3-201ENST00000340660 CEP295Q9C0D2 2601 aa13.95□□□□□ -0.18
ATXN3-201ENST00000340660 MYO7AQ13402 2215 aa13.95□□□□□ -0.18
ATXN3-201ENST00000340660 TET1Q8NFU7 2136 aa13.94□□□□□ -0.18
ATXN3-201ENST00000340660 LILRB3O75022 631 aa13.94□□□□□ -0.18
ATXN3-201ENST00000340660 GJB5O95377 273 aa13.94□□□□□ -0.18
ATXN3-201ENST00000340660 SNAI1O95863 264 aaPredicted RBP13.94□□□□□ -0.18
ATXN3-201ENST00000340660 ARP10275 920 aa13.94□□□□□ -0.18
ATXN3-201ENST00000340660 FCER1AP12319 257 aa13.94□□□□□ -0.18
ATXN3-201ENST00000340660 BEX3Q00994 111 aa13.94□□□□□ -0.18
ATXN3-201ENST00000340660 CYP2W1Q8TAV3 490 aa13.94□□□□□ -0.18
ATXN3-201ENST00000340660 FTOQ9C0B1 505 aaKnown RBP eCLIP13.94□□□□□ -0.18
ATXN3-201ENST00000340660 SEMA4AQ9H3S1 761 aa13.94□□□□□ -0.18
ATXN3-201ENST00000340660 MYH16Q9H6N6 1097 aa13.94□□□□□ -0.18
ATXN3-201ENST00000340660 MBIPQ9NS73 344 aa13.94□□□□□ -0.18
ATXN3-201ENST00000340660 ZHX1Q9UKY1 873 aaPredicted RBP13.94□□□□□ -0.18
ATXN3-201ENST00000340660 MYH13Q9UKX3 1938 aa13.94□□□□□ -0.18
ATXN3-201ENST00000340660 NCK2O43639 380 aa13.93□□□□□ -0.18
ATXN3-201ENST00000340660 RFC2P35250 354 aa13.93□□□□□ -0.18
ATXN3-201ENST00000340660 HYAL1Q12794 435 aa13.93□□□□□ -0.18
ATXN3-201ENST00000340660 ANGPT1Q15389 498 aa13.93□□□□□ -0.18
ATXN3-201ENST00000340660 RUBCNQ92622 972 aa13.93□□□□□ -0.18
ATXN3-201ENST00000340660 RPAP3Q9H6T3 665 aaPredicted RBP13.93□□□□□ -0.18
ATXN3-201ENST00000340660 SPC25Q9HBM1 224 aa13.93□□□□□ -0.18
ATXN3-201ENST00000340660 DIS3Q9Y2L1 958 aaKnown RBP13.93□□□□□ -0.18
ATXN3-201ENST00000340660 NBEAQ8NFP9 2946 aa13.93□□□□□ -0.18
ATXN3-201ENST00000340660 SALL1Q9NSC2 1324 aa13.92□□□□□ -0.18
ATXN3-201ENST00000340660 LINC01565O15544 149 aa13.92□□□□□ -0.18
ATXN3-201ENST00000340660 EYA4O95677 639 aa13.92□□□□□ -0.18
ATXN3-201ENST00000340660 LRRC24Q50LG9 513 aa13.92□□□□□ -0.18
ATXN3-201ENST00000340660 MSLNLQ96KJ4 702 aa13.92□□□□□ -0.18
ATXN3-201ENST00000340660 HAUS7Q99871 368 aa13.92□□□□□ -0.18
ATXN3-201ENST00000340660 TRMT13Q9NUP7 481 aaKnown RBP13.92□□□□□ -0.18
ATXN3-201ENST00000340660 R4GN57 208 aa13.92□□□□□ -0.18
ATXN3-201ENST00000340660 PDE8BO95263 885 aa13.91□□□□□ -0.18
ATXN3-201ENST00000340660 GTF2F1P35269 517 aaKnown RBP eCLIP13.91□□□□□ -0.18
ATXN3-201ENST00000340660 PSMC6P62333 389 aa13.91□□□□□ -0.18
ATXN3-201ENST00000340660 NKX3-2P78367 333 aa13.91□□□□□ -0.18
ATXN3-201ENST00000340660 EPC2Q52LR7 807 aa13.91□□□□□ -0.18
ATXN3-201ENST00000340660 METTL24Q5JXM2 366 aa13.91□□□□□ -0.18
ATXN3-201ENST00000340660 G2E3Q7L622 706 aa13.91□□□□□ -0.18
ATXN3-201ENST00000340660 FEZ1Q99689 392 aa13.91□□□□□ -0.18
ATXN3-201ENST00000340660 ALDH8A1Q9H2A2 487 aaPredicted RBP13.91□□□□□ -0.18
ATXN3-201ENST00000340660 PNNQ9H307 717 aaKnown RBP13.91□□□□□ -0.18
ATXN3-201ENST00000340660 ZNFX1Q9P2E3 1918 aaKnown RBP13.91□□□□□ -0.18
ATXN3-201ENST00000340660 ATG2AQ2TAZ0 1938 aa13.9□□□□□ -0.18
ATXN3-201ENST00000340660 H3BNC9 293 aa13.9□□□□□ -0.18
ATXN3-201ENST00000340660 IQCF3P0C7M6 154 aa13.9□□□□□ -0.18
ATXN3-201ENST00000340660 FGFR2P21802 821 aa13.9□□□□□ -0.18
ATXN3-201ENST00000340660 SDHBP21912 280 aa13.9□□□□□ -0.18
ATXN3-201ENST00000340660 VARSP26640 1264 aaKnown RBP13.9□□□□□ -0.18
ATXN3-201ENST00000340660 CLK2P49760 499 aaKnown RBP13.9□□□□□ -0.18
ATXN3-201ENST00000340660 GPM6BQ13491 265 aa13.9□□□□□ -0.18
ATXN3-201ENST00000340660 PLS1Q14651 629 aa13.9□□□□□ -0.18
ATXN3-201ENST00000340660 LCE2AQ5TA79 106 aaPredicted RBP13.9□□□□□ -0.18
ATXN3-201ENST00000340660 RPGRIP1Q96KN7 1286 aa13.9□□□□□ -0.18
ATXN3-201ENST00000340660 MMP19Q99542 508 aa13.9□□□□□ -0.18
ATXN3-201ENST00000340660 GINM1Q9NU53 330 aa13.9□□□□□ -0.18
ATXN3-201ENST00000340660 WASF2Q9Y6W5 498 aa13.9□□□□□ -0.18
ATXN3-201ENST00000340660 RBAK-RBAKDNI3L0D1 243 aa13.89□□□□□ -0.19
ATXN3-201ENST00000340660 CABYRO75952 493 aa13.89□□□□□ -0.19
ATXN3-201ENST00000340660 SNRPBP14678 240 aaKnown RBP13.89□□□□□ -0.19
ATXN3-201ENST00000340660 RRP1P56182 461 aaKnown RBP13.89□□□□□ -0.19
ATXN3-201ENST00000340660 NEUROD2Q15784 382 aa13.89□□□□□ -0.19
ATXN3-201ENST00000340660 CCDC30Q5VVM6 783 aa13.89□□□□□ -0.19
ATXN3-201ENST00000340660 FAM117BQ6P1L5 589 aa13.89□□□□□ -0.19
ATXN3-201ENST00000340660 LINS1Q8NG48 757 aa13.89□□□□□ -0.19
ATXN3-201ENST00000340660 CRBNQ96SW2 442 aa13.89□□□□□ -0.19
ATXN3-201ENST00000340660 TANC1Q9C0D5 1861 aa13.89□□□□□ -0.19
ATXN3-201ENST00000340660 MROH7-TTC4A0A0A0MT08 1334 aa13.89□□□□□ -0.19
ATXN3-201ENST00000340660 ASTN1O14525 1302 aa13.89□□□□□ -0.19
ATXN3-201ENST00000340660 GPR75-ASB3A0A0A6YYF3 556 aa13.88□□□□□ -0.19
ATXN3-201ENST00000340660 CCDC144BQ3MJ40 725 aa13.88□□□□□ -0.19
ATXN3-201ENST00000340660 C8orf58Q8NAV2 365 aa13.88□□□□□ -0.19
ATXN3-201ENST00000340660 SMRP1Q8NCR6 262 aa13.88□□□□□ -0.19
ATXN3-201ENST00000340660 ACER1Q8TDN7 264 aa13.88□□□□□ -0.19
ATXN3-201ENST00000340660 PHF7Q9BWX1 381 aaPredicted RBP13.88□□□□□ -0.19
ATXN3-201ENST00000340660 SEZ6LQ9BYH1 1024 aa13.88□□□□□ -0.19
ATXN3-201ENST00000340660 KIAA1683Q9H0B3 1180 aa13.88□□□□□ -0.19
ATXN3-201ENST00000340660 INCENPQ9NQS7 918 aa13.88□□□□□ -0.19
ATXN3-201ENST00000340660 PI4KBQ9UBF8 816 aa13.88□□□□□ -0.19
ATXN3-201ENST00000340660 RALGAPA2Q2PPJ7 1873 aa13.87□□□□□ -0.19
ATXN3-201ENST00000340660 IFIT1P09914 478 aaKnown RBP13.87□□□□□ -0.19
ATXN3-201ENST00000340660 CLCN5P51795 746 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms