RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 UBE2Q1Q7Z7E8 422 aa17.57■□□□□ 0.4
UBE3B-201ENST00000340074 FCHSD1Q86WN1 690 aa17.57■□□□□ 0.4
UBE3B-201ENST00000340074 DIS3LQ8TF46 1054 aaKnown RBP17.57■□□□□ 0.4
UBE3B-201ENST00000340074 VTA1Q9NP79 307 aa17.57■□□□□ 0.4
UBE3B-201ENST00000340074 PXMP2Q9NR77 195 aa17.57■□□□□ 0.4
UBE3B-201ENST00000340074 PDGFCQ9NRA1 345 aa17.57■□□□□ 0.4
UBE3B-201ENST00000340074 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.56■□□□□ 0.4
UBE3B-201ENST00000340074 B4DLN1 442 aa17.56■□□□□ 0.4
UBE3B-201ENST00000340074 MEIS2O14770 477 aa17.56■□□□□ 0.4
UBE3B-201ENST00000340074 PRPF3O43395 683 aaKnown RBP17.56■□□□□ 0.4
UBE3B-201ENST00000340074 IFNAR1P17181 557 aa17.56■□□□□ 0.4
UBE3B-201ENST00000340074 EIF2AK2P19525 551 aaKnown RBP17.56■□□□□ 0.4
UBE3B-201ENST00000340074 ADCYAP1R1P41586 468 aa17.56■□□□□ 0.4
UBE3B-201ENST00000340074 MRPL12P52815 198 aaKnown RBP17.56■□□□□ 0.4
UBE3B-201ENST00000340074 PFKFB3Q16875 520 aaPredicted RBP17.56■□□□□ 0.4
UBE3B-201ENST00000340074 TYW1BQ6NUM6 668 aa17.56■□□□□ 0.4
UBE3B-201ENST00000340074 CUL5Q93034 780 aa17.56■□□□□ 0.4
UBE3B-201ENST00000340074 PAWRQ96IZ0 340 aaKnown RBP17.56■□□□□ 0.4
UBE3B-201ENST00000340074 IWS1Q96ST2 819 aa17.56■□□□□ 0.4
UBE3B-201ENST00000340074 SLC26A6Q9BXS9 759 aa17.56■□□□□ 0.4
UBE3B-201ENST00000340074 PSTPIP2Q9H939 334 aa17.56■□□□□ 0.4
UBE3B-201ENST00000340074 XPNPEP3Q9NQH7 507 aa17.56■□□□□ 0.4
UBE3B-201ENST00000340074 STXBP3O00186 592 aa17.55■□□□□ 0.4
UBE3B-201ENST00000340074 PIK3CDO00329 1044 aa17.55■□□□□ 0.4
UBE3B-201ENST00000340074 CPLX1O14810 134 aa17.55■□□□□ 0.4
UBE3B-201ENST00000340074 PGK1P00558 417 aa17.55■□□□□ 0.4
UBE3B-201ENST00000340074 SCG2P13521 617 aa17.55■□□□□ 0.4
UBE3B-201ENST00000340074 NAPAP54920 295 aa17.55■□□□□ 0.4
UBE3B-201ENST00000340074 AKAP17AQ02040 695 aaKnown RBP17.55■□□□□ 0.4
UBE3B-201ENST00000340074 SCRN1Q12765 414 aa17.55■□□□□ 0.4
UBE3B-201ENST00000340074 PKN1Q16512 942 aa17.55■□□□□ 0.4
UBE3B-201ENST00000340074 SMARCC2Q8TAQ2 1214 aa17.55■□□□□ 0.4
UBE3B-201ENST00000340074 RNF26Q9BY78 433 aaPredicted RBP17.55■□□□□ 0.4
UBE3B-201ENST00000340074 SLKQ9H2G2 1235 aaPredicted RBP17.55■□□□□ 0.4
UBE3B-201ENST00000340074 BARHL2Q9NY43 387 aa17.55■□□□□ 0.4
UBE3B-201ENST00000340074 RBM27Q9P2N5 1060 aaKnown RBP17.55■□□□□ 0.4
UBE3B-201ENST00000340074 DOCK5Q9H7D0 1870 aa17.55■□□□□ 0.4
UBE3B-201ENST00000340074 PDE4DIPQ5VU43 2346 aa17.55■□□□□ 0.4
UBE3B-201ENST00000340074 hCG_1984214I3L0E3 225 aa17.55■□□□□ 0.4
UBE3B-201ENST00000340074 PFKFB2O60825 505 aa17.55■□□□□ 0.4
UBE3B-201ENST00000340074 DUSP11O75319 330 aaKnown RBP17.55■□□□□ 0.4
UBE3B-201ENST00000340074 MYCNP04198 464 aaPredicted RBP17.55■□□□□ 0.4
UBE3B-201ENST00000340074 NR3C2P08235 984 aa17.55■□□□□ 0.4
UBE3B-201ENST00000340074 TNFAIP2Q03169 654 aa17.55■□□□□ 0.4
UBE3B-201ENST00000340074 TMEM63BQ5T3F8 832 aa17.55■□□□□ 0.4
UBE3B-201ENST00000340074 GJC2Q5T442 439 aaPredicted RBP17.55■□□□□ 0.4
UBE3B-201ENST00000340074 ZNF713Q8N859 430 aaPredicted RBP17.55■□□□□ 0.4
UBE3B-201ENST00000340074 PDCD2LQ9BRP1 358 aa17.55■□□□□ 0.4
UBE3B-201ENST00000340074 SYNRGQ9UMZ2 1314 aa17.54■□□□□ 0.4
UBE3B-201ENST00000340074 DNM1LO00429 736 aa17.54■□□□□ 0.4
UBE3B-201ENST00000340074 LARGE1O95461 756 aa17.54■□□□□ 0.4
UBE3B-201ENST00000340074 SMPD1P17405 629 aa17.54■□□□□ 0.4
UBE3B-201ENST00000340074 PGM5Q15124 567 aa17.54■□□□□ 0.4
UBE3B-201ENST00000340074 STXBP2Q15833 593 aa17.54■□□□□ 0.4
UBE3B-201ENST00000340074 UBE2SQ16763 222 aa17.54■□□□□ 0.4
UBE3B-201ENST00000340074 ME3Q16798 604 aa17.54■□□□□ 0.4
UBE3B-201ENST00000340074 IQSEC1Q6DN90 963 aa17.54■□□□□ 0.4
UBE3B-201ENST00000340074 PPP1R18Q6NYC8 613 aa17.54■□□□□ 0.4
UBE3B-201ENST00000340074 NECAB2Q7Z6G3 386 aa17.54■□□□□ 0.4
UBE3B-201ENST00000340074 ARRDC4Q8NCT1 418 aa17.54■□□□□ 0.4
UBE3B-201ENST00000340074 IL31RAQ8NI17 732 aa17.54■□□□□ 0.4
UBE3B-201ENST00000340074 BACH2Q9BYV9 841 aa17.54■□□□□ 0.4
UBE3B-201ENST00000340074 ADAMTS4O75173 837 aa17.53■□□□□ 0.4
UBE3B-201ENST00000340074 MYCLP12524 364 aaPredicted RBP17.53■□□□□ 0.4
UBE3B-201ENST00000340074 PTGS1P23219 599 aa17.53■□□□□ 0.4
UBE3B-201ENST00000340074 SSRP1Q08945 709 aaKnown RBP17.53■□□□□ 0.4
UBE3B-201ENST00000340074 LRRC41Q15345 812 aa17.53■□□□□ 0.4
UBE3B-201ENST00000340074 CPLX2Q6PUV4 134 aaKnown RBP17.53■□□□□ 0.4
UBE3B-201ENST00000340074 TRIM22Q8IYM9 498 aa17.53■□□□□ 0.4
UBE3B-201ENST00000340074 NECAB1Q8N987 351 aa17.53■□□□□ 0.4
UBE3B-201ENST00000340074 WDR11Q9BZH6 1224 aa17.53■□□□□ 0.4
UBE3B-201ENST00000340074 RIC8AQ9NPQ8 531 aa17.53■□□□□ 0.4
UBE3B-201ENST00000340074 GNEQ9Y223 722 aaKnown RBP17.53■□□□□ 0.4
UBE3B-201ENST00000340074 FRMPD4Q14CM0 1322 aa17.52■□□□□ 0.4
UBE3B-201ENST00000340074 RBM47A0AV96 593 aaKnown RBP17.52■□□□□ 0.4
UBE3B-201ENST00000340074 SMCO2A6NFE2 343 aa17.52■□□□□ 0.4
UBE3B-201ENST00000340074 IRX5P78411 483 aaPredicted RBP17.52■□□□□ 0.4
UBE3B-201ENST00000340074 SEPT14Q6ZU15 432 aa17.52■□□□□ 0.4
UBE3B-201ENST00000340074 RNF180Q86T96 592 aa17.52■□□□□ 0.4
UBE3B-201ENST00000340074 VSIG10LQ86VR7 867 aa17.52■□□□□ 0.4
UBE3B-201ENST00000340074 SCFD2Q8WU76 684 aa17.52■□□□□ 0.4
UBE3B-201ENST00000340074 TBC1D32Q96NH3 1257 aa17.52■□□□□ 0.4
UBE3B-201ENST00000340074 C11orf49Q9H6J7 331 aa17.52■□□□□ 0.4
UBE3B-201ENST00000340074 MYADML2A6NDP7 307 aa17.51■□□□□ 0.39
UBE3B-201ENST00000340074 KBTBD13C9JR72 458 aa17.51■□□□□ 0.39
UBE3B-201ENST00000340074 DTNBO60941 627 aa17.51■□□□□ 0.39
UBE3B-201ENST00000340074 EIF3JO75822 258 aaKnown RBP17.51■□□□□ 0.39
UBE3B-201ENST00000340074 C6orf222P0C671 652 aaPredicted RBP17.51■□□□□ 0.39
UBE3B-201ENST00000340074 COL6A1P12109 1028 aa17.51■□□□□ 0.39
UBE3B-201ENST00000340074 CCND2P30279 289 aa17.51■□□□□ 0.39
UBE3B-201ENST00000340074 ADCY7P51828 1080 aa17.51■□□□□ 0.39
UBE3B-201ENST00000340074 DUSP28Q4G0W2 176 aa17.51■□□□□ 0.39
UBE3B-201ENST00000340074 TLK2Q86UE8 772 aa17.51■□□□□ 0.39
UBE3B-201ENST00000340074 GTF3C6Q969F1 213 aa17.51■□□□□ 0.39
UBE3B-201ENST00000340074 ZFP91Q96JP5 570 aaPredicted RBP17.51■□□□□ 0.39
UBE3B-201ENST00000340074 UPF3AQ9H1J1 476 aaKnown RBP17.51■□□□□ 0.39
UBE3B-201ENST00000340074 SPDYE3A6NKU9 549 aa17.5■□□□□ 0.39
UBE3B-201ENST00000340074 CDKL5O76039 1030 aa17.5■□□□□ 0.39
UBE3B-201ENST00000340074 ARIH2O95376 493 aa17.5■□□□□ 0.39
UBE3B-201ENST00000340074 DEXIO95424 95 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms